BAC Information

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BAC

Clone NameB6Ng01-180C12
Chromosome6 (Build37)
Map Location 13,144,068 - 13,144,216
singlet/doubletsinglet
Overlap geneGm467
Upstream geneThsd7a, LOC667735, LOC384350, Tmem106b
Downstream geneGm725, 1700016P04Rik, LOC100040478, Tmem168, B630005N14Rik, Gpr85, 2610001J05Rik, LOC100041043
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180C12.bB6Ng01-180C12.g
ACCGA006669GA006670
length1,226736
definitionB6Ng01-180C12.b B6Ng01-180C12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcccagaacatggagactaaagcagtgggcctgtcatgaatgtg
agaaccgtccttgactgcgtaataaattccataccagcctgggctataga
ggtgtaccatatgtgtgtatgtacgtgtacgacatctcaacaaggcaaag
cagacaaacaaaaatcacttcaatatagtaggaaatgatctgagaaagaa
atgaaacgggtttgtttgtttgtttgtttgtttgtttaatagtagtcata
tttattgccaacttggatggacttgcaatcacctaggagacgcaccacca
gggatgtgtgggaaggtgccagagtgttttaactgaggatggaagaatga
aggtaggaagaagcaaaggtccctccctccgtgagtcaacggagaaagga
atgtcagcaggtcccagtcctgctttctgcttcctggttttcccaggtat
gaggagccaggctacaagctggcacagctgtgaagtttgccatgctcctc
ccgacatgatacacggagctctcttaaccagggaagccaagaatcaatcc
ctttccccttacactgttttttgacaggtattttgttacagtgatgagaa
aaaagagaaatgcagaaataaagactttacacggaaagactgaagaagcc
aataaacaaagaactaaaaaccgtccgtagttctggatggagagactcag
tcttgtttaagaggccactgctgccaaatagaggtctacaaattcaatgc
aatatctgtcaaaagctattttgttttctgggaaaacatatttaaaggtc
atgtggaatttcaaagggccctaccttagtctgttcacgctgctgtaaca
ataaccccagcagctggggaaatcgtagagaatagaaacctttctcttat
agattgagagcataggcggttgaaagtcaagggacccggcagacttggtt
gtctatgaaggcagcttttctctctgtttctcaagaacaatgggttttgg
tgacagttcctttcagagtggatacaacactatgtcttcagtgatggaat
gagaaagtgggggctttccactcgagtcttttataacgggacttcctcag
tcacgagggctctgctcttcatgtttaggtagccttcgaaggcattacct
tcctgggaactcgagcggtgagttcaagctcacctccaccttcaggaaac
ttactaggaacatgagacccagttct
gaattcattttgtgttggccaaactcctgggcatgggcactgctctgaaa
tgtagataatatacccagtgagattccacaggagaaaacagattctccca
ctgccagcaggcatcagttgcaaatagcttctccatcaggggtaggatgc
agtgtccacaccagcatctcagtgctcagagcacattctgtcttgagtct
gtgcggtttttacaggtgttgctacagtctctgtgggtttgtatgggcat
tggatctgttgtgtctgaaagacacacttggagttagcaatcacttctgg
ctcttaaaatctctctgcctcttcttcctcatggattccagagccttgag
aggaggggtttgtgtaaacttcccatttaggactgaacgctctaaagttt
ctcactctctgcacactgccaagttatgagtctctgtgttaattcctgcc
tactgtaaaaaggagcttctctgatgtgggtcgagaaaggtactgatctg
cagcagatagccctggggctaattgtattttatgttcattctgttctctt
gtgaggggctgccaacaaggaatgagtcagcactcaggtgatttcctgta
aacctacttcccaccttaatttttaaatagtggctagagctggtgattgg
acagagaaagagaggaaggtggagctgaaggttttgggagagagagggag
agagagagagagagagagagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_13144068_13144216
seq2: B6Ng01-180C12.g_722_800 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50
                      ||||||||||||||||||||||||||||||||||
seq2  ----------------CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  34

seq1  CTCTCTCTCTCTCTCCC----CCTT----TCCCTCTCCCTCTCCTCCCTC  92
      ||||| |||||||||||    ||||    |||  || |||||| |     
seq2  CTCTCCCTCTCTCTCCCAAAACCTTCAGCTCCACCTTCCTCTCTT-----  79

seq1  TCTCTCCCCCTCCCTCTCCTCCCTCTTCCTCTCCCTCTCTCTCCCCCTCC  142
                                                        
seq2  --------------------------------------------------  79

seq1  CTCTCTT  149
             
seq2  -------  79