BAC Information

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BAC

Clone NameB6Ng01-180C23
Chromosome6 (Build37)
Map Location 31,245,108 - 31,245,665
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe2h, Zc3hc1, 2410127E18Rik, 2700094F01Rik, 1700025E21Rik, Cpa2, Cpa4, Cpa5, Cpa1, Tsga14, Mest, Copg2, Copg2, Tsga13, Klf14, LOC100038973, AB041803
Downstream geneMkln1, Podxl, EG619959, LOC620104, 1700012A03Rik, Plxna4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180C23.bB6Ng01-180C23.g
ACCGA006691GA006692
length1,231552
definitionB6Ng01-180C23.b B6Ng01-180C23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgtgtttacaaatacattttaagattgctttttctatgtct
gttaaggaaggtattggcttttttcttgggattctgctcaaccctgtaga
ctactgttaagataatcatgtccactattctcctaatccagggacacagg
acgtctttttatcttctagtgactttatcaatttctctcttgaatgtttt
aatgttttccaggcctttcacatccctggatagtctagatttagctcaag
gacatgagtgtgaactgtgataagactgttcctctaacttctttctcatc
atgctactgactttgtagcctgccactctgcttaaagtgtatgtcagctc
taagagttttctgtaagttcgtagaatcttatacatagaatcttatcatc
tgcataccggtcctatttttatgccttgtatttctctagtcttgaccctc
taattaagaatcccagaactatactgaataactgatgaaaacaagcatcc
ttatcttctttgattttagtagaaatcctttgagctctgtcccacttagt
ataatgttggctatagatttgttatatatagcttttataatgttgagata
tgttctttctactcccagttccttgggtgttttgcctgcatgcactgaaa
gtattgctggtgccagtgaaggccagaaacaggtgattaaaccccccgga
actagagttctagaaggttttgaatttccatgtgggtgctgggaattgaa
ctcatatccgccataagtgcagctaacactctgaaccactgaaccctagc
ttcagctcccacttcaggacttttatcattttatcacccattgtgacaat
catgtggttatggtcatgagtccattcatatagcatattacatttcttga
tttctgaatgttgaacccctccagtatctctggactaaagccaagcttga
tcaaatgatgatccttttttatgcgctcctatattcagtttgtgagtaca
ttgctgagaaatttttaaagatttatttatttaatttctatatatatgag
ggtttatttattgtatatttaaggtacacttatagctgtctttttacgca
ctaagaagagggtgtcgaacccattacagaatgggttgtgagccacacat
gtgggtgcctggaattgactcagaccttcaagaacagtcagtctcttaac
tggtcgagaaaatttgtgcagagtatctcac

actaagtagccagattgctcctacctcagtcacctgagtgctagggtagt
ttagaattgtagaaagtgacatgcagttgggctgttatgtttggctttag
atagtcctgtgaggaaacccaaaccctgacttctaaaatcctcacctgta
aatctacgatggggaggcagttaattaggaccctctgttgataagcagcc
atagcactgaatgcaataagcactaaggatatttgaattttcttctgtat
acacatattctaatcctcagtcagctcctctattctaaagcataccgcga
caaggaaggagtgtttccctaatgtcttctgtttagaaatcaactttaga
ctgaggcctttgaccatattagataatgagagccgctatctagcttttgc
atattggttgggccactctggctagttggacatctcctttgactggtcac
tgcctagctacagcagttagaaggaaatccgaaaaggtctcttttttatt
gtaaataaaaggaggcaacaatgatgatccatttaagcaagttttggtgt
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_31245108_31245665
seq2: B6Ng01-180C23.g_57_614

seq1  GAATTCACTAAGTAGCCAGATTGCTCCTACCTCAGTCACCTGAGTGCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAGTAGCCAGATTGCTCCTACCTCAGTCACCTGAGTGCTAG  50

seq1  GGTAGTTTAGAATTGTAGAAAGTGACATGCAGTTGGGCTGTTATGTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTTAGAATTGTAGAAAGTGACATGCAGTTGGGCTGTTATGTTTGG  100

seq1  CTTTAGATAGTCCTGTGAGGAAACCCAAACCCTGACTTCTAAAATCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGATAGTCCTGTGAGGAAACCCAAACCCTGACTTCTAAAATCCTCA  150

seq1  CCTGTAAATCTACGATGGGGAGGCAGTTAATTAGGACCCTCTGTTGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAATCTACGATGGGGAGGCAGTTAATTAGGACCCTCTGTTGATAA  200

seq1  GCAGCCATAGCACTGAATGCAATAAGCACTAAGGATATTTGAATTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCATAGCACTGAATGCAATAAGCACTAAGGATATTTGAATTTTCTT  250

seq1  CTGTATACACATATTCTAATCCTCAGTCAGCTCCTCTATTCTAAAGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATACACATATTCTAATCCTCAGTCAGCTCCTCTATTCTAAAGCATA  300

seq1  CCGCGACAAGGAAGGAGTGTTTCCCTAATGTCTTCTGTTTAGAAATCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGACAAGGAAGGAGTGTTTCCCTAATGTCTTCTGTTTAGAAATCAAC  350

seq1  TTTAGACTGAGGCCTTTGACCATATTAGATAATGAGAGCCGCTATCTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACTGAGGCCTTTGACCATATTAGATAATGAGAGCCGCTATCTAGC  400

seq1  TTTTGCATATTGGTTGGGCCACTCTGGCTAGTTGGACATCTCCTTTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCATATTGGTTGGGCCACTCTGGCTAGTTGGACATCTCCTTTGACT  450

seq1  GGTCACTGCCTAGCTACAGCAGTTAGAAGGAAATCCGAAAAGGTCTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTGCCTAGCTACAGCAGTTAGAAGGAAATCCGAAAAGGTCTCTTT  500

seq1  TTTATTGTAAATAAAAGGAGGCAACAATGATGATCCATTTAAGCAAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTAAATAAAAGGAGGCAACAATGATGATCCATTTAAGCAAGTTT  550

seq1  TGGTGTGT  558
      ||||||||
seq2  TGGTGTGT  558


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