BAC Information

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BAC

Clone NameB6Ng01-180K03
Chromosome6 (Build37)
Map Location 75,416,495 - 75,417,668
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180K03.bB6Ng01-180K03.g
ACCGA007012GA007013
length1,1741,211
definitionB6Ng01-180K03.b B6Ng01-180K03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtgtttaactagaattttcttagtcccctgtgaatgaggca
gaaattaaggagaggccacaacaggtggtttgatggaaaacagggaatga
acctggggatttgacttagaagaatggaagtattacctgtagttagcttc
ccagcttccctggttagttttatctgaaggtgcctgctgagataaagggg
tgcacactgaggagaaatgtcaaagggaaagatttgtatgatccaccaga
gaagaagacaggagttatggcagggcacttcatgtggtcagctacagaac
ttgaagtaagactacggattgcaggattggatttcgagggacagaaggag
aggtaaagttttcatctaccttatctgcctttctggccacatcatagtta
tgagatagaaattagtaagcattgtattagtccatggtatcagaattgac
ttggagaaggtaaatttataaactcacatatcagcctcagggacaaaaat
gttctaatatgaacaatggagtctgaagaataaacctcttttgtttcctt
gtgcattgttttgttttaaaatcagattccatcatatcaatgggtagagt
gaacagaaaggacctggctaagcgtccttaagtccttccctaactaacag
actttcttctctgaggctccactttccaaatgttccacaaccttctacat
aggaacatcagtaaggagccaaatgtcaagtacacgagtctaagagagac
atctcaaattcaaaacatagtagtcacataatatgctacttcttagtgag
aataaatatatgcacaagctgagctattctaaatttttaaaagcctcatc
aaatataatggaaacaatagaaggacttcatagagttgggccagtgttat
tcattttcttgcttgattagtggatttccatatttgacaaatgatttata
aagttaaaataggggactagtaagatcccttgctttgaaatacatcagca
gaataaacttttttagttatggttaaacattataattatttttgagtttt
ttcatttaatgtaaggtaaatcggtattttatatttcatcctatttttat
atggagaattattgaagttgagtacatttatccaatcctatattcttttt
atcttggattttcattattacatt
gaattccatccaaagtattttcttcatttctgtttacatctgcgtggttc
tgcttgtgtgagagcagagctcagaggacaactttcaggtttcaattctt
accttaatttttactgaggaagggtttctcttagttgtggcttcatgtac
attaggctagatagctcaggagcttctgggtgattttcattttcctcaat
acatcttattgcagaagtctttggattaccattgaacaccaatgtatctg
aggtttctgtgcgttctagagatcaaacagatcatcagagctctgatacg
caaacagcattatgccctgaatcatttcctggccctctaagtttatttga
ttttggaaacaataaaattcttaaacaattattttaaagagactatctaa
ggaatagcatatgaatgaatgtgtgatgtccttcaaaatgagaagagcaa
agaagaaacagagaaaaaggaagagcatagggaaggaaggaagaaaaaga
gaagaaaagaaataaagaaaagagaaaagaagaaataatgagagacagac
acagacagacagacagacagacagatctgggtgtggtgacatgttcatgt
aattccagggctagggagtcaaaagtaagtggaactctgaatttgagacc
agtgtggtctgcagagccagttccaagataccagggcattcttcccagct
acacagagaaaacattttcttaaacaaccaaaaggaaaataacaagacta
ttttattttcctgtctgaataaaattcaagaatcgctccttgggccctcc
atttcattagatagtttgagtctgtgcgttgtagcgtggttaccctatac
tttatggttaataaccacttataagtaagtacataccattcatgtctttt
tatatctaggttctttcactcaggaggatattttctagtttcatctattt
gcctgaaatttttcatgatcttttaaaaatagctgagtattaatcccatt
ctgtaaataaactacatttttctatattcagtcttcggtttgagtgacat
ctgattgtttctaggtttctagctattatggataagccatatgagcatag
tggaacagtggcctgtagtatgatgggaacaccagtttaggtgtaagcta
aggagtgggaatagcctatggttccttgggaggtgggagagctattctcc
caacacatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75416495_75417668
seq2: B6Ng01-180K03.b_31_1204

seq1  GAATTCCAGGTGTTTAACTAGAATTTTCTTAGTCCCCTGTGAATGAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTGTTTAACTAGAATTTTCTTAGTCCCCTGTGAATGAGGCA  50

seq1  GAAATTAAGGAGAGGCCACAACAGGTGGTTTGATGGAAAACAGGGAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAGGAGAGGCCACAACAGGTGGTTTGATGGAAAACAGGGAATGA  100

seq1  ACCTGGGGATTTGACTTAGAAGAATGGAAGTATTACCTGTAGTTAGCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGGATTTGACTTAGAAGAATGGAAGTATTACCTGTAGTTAGCTTC  150

seq1  CCAGCTTCCCTGGTTAGTTTTATCTGAAGGTGCCTGCTGAGATAAAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTCCCTGGTTAGTTTTATCTGAAGGTGCCTGCTGAGATAAAGGGG  200

seq1  TGCACACTGAGGAGAAATGTCAAAGGGAAAGATTTGTATGATCCACCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACTGAGGAGAAATGTCAAAGGGAAAGATTTGTATGATCCACCAGA  250

seq1  GAAGAAGACAGGAGTTATGGCAGGGCACTTCATGTGGTCAGCTACAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGACAGGAGTTATGGCAGGGCACTTCATGTGGTCAGCTACAGAAC  300

seq1  TTGAAGTAAGACTACGGATTGCAGGATTGGATTTCGAGGGACAGAAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTAAGACTACGGATTGCAGGATTGGATTTCGAGGGACAGAAGGAG  350

seq1  AGGTAAAGTTTTCATCTACCTTATCTGCCTTTCTGGCCACATCATAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAGTTTTCATCTACCTTATCTGCCTTTCTGGCCACATCATAGTTA  400

seq1  TGAGATAGAAATTAGTAAGCATTGTATTAGTCCATGGTATCAGAATTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAGAAATTAGTAAGCATTGTATTAGTCCATGGTATCAGAATTGAC  450

seq1  TTGGAGAAGGTAAATTTATAAACTCACATATCAGCCTCAGGGACAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAAGGTAAATTTATAAACTCACATATCAGCCTCAGGGACAAAAAT  500

seq1  GTTCTAATATGAACAATGGAGTCTGAAGAATAAACCTCTTTTGTTTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAATATGAACAATGGAGTCTGAAGAATAAACCTCTTTTGTTTCCTT  550

seq1  GTGCATTGTTTTGTTTTAAAATCAGATTCCATCATATCAATGGGTAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTGTTTTGTTTTAAAATCAGATTCCATCATATCAATGGGTAGAGT  600

seq1  GAACAGAAAGGACCTGGCTAAGCGTCCTTAAGTCCTTCCCTAACTAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAAAGGACCTGGCTAAGCGTCCTTAAGTCCTTCCCTAACTAACAG  650

seq1  ACTTTCTTCTCTGAGGCTCCACTTTCCAAATGTTCCACAACCTTCTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTCTCTGAGGCTCCACTTTCCAAATGTTCCACAACCTTCTACAT  700

seq1  AGGAACATCAGTAAGGAGCCAAATGTCAAGTACACGAGTCTAAGAGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATCAGTAAGGAGCCAAATGTCAAGTACACGAGTCTAAGAGAGAC  750

seq1  ATCTCAAATTCAAAACATAGTAGTCACATAATATGCTACTTCTTAGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAATTCAAAACATAGTAGTCACATAATATGCTACTTCTTAGTGAG  800

seq1  AATAAATATATGCACAAGCTGAGCTATTCTAAATTTTTAAAAGCCTCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATATATGCACAAGCTGAGCTATTCTAAATTTTTAAAAGCCTCATC  850

seq1  AAATATAATGGAAACAATAGAAGGACTTCATAGAGTTGGGCCAGTGTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATGGAAACAATAGAAGGACTTCATAGAGTTGGGCCAGTGTTAT  900

seq1  TCATTTTCTTGCTTGATTAGTGGATTTCCATATTTGACAAATGATTTATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCTTGCTTGATTAGTGGATTTCCATATTTGACAAATGATTTATA  950

seq1  AAGTTAAAATAGGGGACTAGTAAGATCCCTTGCTTTGAAATACATCAGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAAATAGGGGACTAGTAAGATCCCTTGCTTTGAAATACATCAGCA  1000

seq1  GAATAAACTTTTTTAGTTATGGTTAAACAATATAATTATTTTTGAG-TTT  1049
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  GAATAAACTTTTTTAGTTATGGTTAAACATTATAATTATTTTTGAGTTTT  1050

seq1  TTCATTTAATGTAAAGTAAATC-GTA-TTTATATTTCATCCTA--TTTAT  1095
      |||||||||||||| ||||||| ||| ||||||||||||||||  |||||
seq2  TTCATTTAATGTAAGGTAAATCGGTATTTTATATTTCATCCTATTTTTAT  1100

seq1  ATGGAGAATTATTAAAGTGGAGTAATATTTTAATCATAT-CTATATTCTT  1144
      ||||||||||||| |||| |||| | ||||  |||  || ||||||||||
seq2  ATGGAGAATTATTGAAGTTGAGT-ACATTT--ATCCAATCCTATATTCTT  1147

seq1  TTTATCTTGGATATTTTCATTATTTACATT  1174
      ||||||||||  |||||||||| |||||||
seq2  TTTATCTTGG--ATTTTCATTA-TTACATT  1174