BAC Information

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BAC

Clone NameB6Ng01-181G08
Chromosome6 (Build37)
Map Location 131,769,927 - 131,771,083
singlet/doubletsinglet
Overlap genenone
Upstream geneEG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
Downstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181G08.bB6Ng01-181G08.g
ACCGA007568GA007569
length1,2341,154
definitionB6Ng01-181G08.b B6Ng01-181G08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctcacctaatacccaaacttttaggtaagcagaacttaatgtt
gcaaagttgggaaagaataatcgctaataggtcactcatgtcaatgagtg
aaaatatttttctttttacccattgattcctgagtctgtgaatcaggact
gtgggagaaaccataccatatatttcacattgatacaaagcatatattat
atttggagaatcttgtcccaggtctctagccctctgtcatctaattaatt
ctgtaacggtgtcttaaaaggtcatttcatcttttatcaggctggttgct
tccagactgtgagaaaaaaggtaagaccagtggatttactgactattggc
ccactgttacacttctctgtctttgaagtgaattctttgttcagaagcag
tactgcatgaaatatcatgtcatggatgaaacattttgtaggcccacaga
acattctttaacatattattgaatctatgcatatttcccgtctcttccac
tatggtgactttgttcatgggcccactggacaatggcaggagaaagaggc
tgactgtcaatacaatggatcactatatgtatttgagtattttactttct
cctcaaatgaagtcaccatttgataaaagtttagatgggacacaagtatc
tttgcatcattttcccactggaaaaaatcaactacacttttcttcccaga
tatttctctcatcacttttccattcgtgttctttacaaacccctgatcat
ctagacaatccattggccacagcccatgaattagtgaacaatgacatgtc
tgactcttctcctagtcaatatgcacgacaatatatactgcctgaaattc
tgtccactgtacatattttcctttacttgtgtattttagggttattccag
aaaatggttgaaatgctacagctgtacatatctggttggtgcctgcataa
catactgaaccatcagtaaactaggccctaatttactcttttcttactca
aatgattatagggcatgccacaataagtggatagtttatggttggcagaa
agcagtatggtaatagggagtgaaaccatagtatttttgtcactccttta
tatattcttgttgtgctttcagacattcctcaggacatcactcatatttt
atgtccattgaatatattactacggtaatttcccctcttggactggaatt
ggagcaaataacacacctaggtgcaagtagaaat
gaattctcacttttaatttgttatcaggagattcctgcaagtggcctgac
accaaagagaaggtgattcccaagaacaaaaatattttctgtctctttta
aagtccttatgtccagggaaaactacaaagcattttacaactggaacaga
ttttgccaatttctagcatatactctctagaatttgcactgattaaagca
tcaggcaaagtatattgtcactgtcagtctgtaaaaatctttgcaccttt
atattttcataggcagagttcaagactcagtaatctacaatggttgagga
gaggtttagaaatttttaccaactagtgcctagatgccttacccccattc
ctgatgttattcctactttgtattaaatttaacatcatgcaattcttcag
agaatattgaatgatgtcctataaaacaatgtgatttccataatcaaact
ttaggacacaggtaagcttgtcagtcagtctcagaagcaattttggaaaa
gatctgggatgtaagagcatgtaggagaaccctaagaagttaccctccag
ctctattataaaatattttgttttgtatcttccttgaaaaactggaaaat
ttacagcttctttctctaagtatggtatacatttcaaagtcatgtttaga
aaatgtctcaccagtatgtttattctttaattctcaacacattcaagaag
aaagtccaacagtacacatcataaaatgccacatttgttgcttccaacat
actgaaattctgagtgtggattgagcaaaatatacagattttgctctgat
acttgtatatcaccacctgtattattaaatttattctgtaattctctgat
tttgaattaatcctaacgagttatttgtatcatttgtttggtatctactg
tgcagtaaagctggatttccactctgattatgaaaatgtgctaatttcat
gcctcttttcagatttgagagcacttttctaaacatagtactgttcattt
ttgttcctctgctcagcatttttatgtctttcagattaatattaaagaaa
atttcatgcagtatattgtgagcctttaatcatggtttatttgaggacat
tagcagtcatgtgatcctcggactggacagtgttctcctctcctcagtct
ggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131769927_131771083
seq2: B6Ng01-181G08.g_66_1219

seq1  GAATTCTCACTTTTAATTTGTTATCAGGAGATTCCTGCAAGTGGCCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTTTTAATTTGTTATCAGGAGATTCCTGCAAGTGGCCTGAC  50

seq1  ACCAAAGAGAAGGTGATTCCCAAGAACAAAAATATTTTCTGTCTCTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGAGAAGGTGATTCCCAAGAACAAAAATATTTTCTGTCTCTTTTA  100

seq1  AAGTCCTTATGTCCAGGGAAAACTACAAAGCATTTTACAACTGGAACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTTATGTCCAGGGAAAACTACAAAGCATTTTACAACTGGAACAGA  150

seq1  TTTTGCCAATTTCTAGCATATACTCTCTAGAATTTGCACTGATTAAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCAATTTCTAGCATATACTCTCTAGAATTTGCACTGATTAAAGCA  200

seq1  TCAGGCAAAGTATATTGTCACTGTCAGTCTGTAAAAATCTTTGCACCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAAAGTATATTGTCACTGTCAGTCTGTAAAAATCTTTGCACCTTT  250

seq1  ATATTTTCATAGGCAGAGTTCAAGACTCAGTAATCTACAATGGTTGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCATAGGCAGAGTTCAAGACTCAGTAATCTACAATGGTTGAGGA  300

seq1  GAGGTTTAGAAATTTTTACCAACTAGTGCCTAGATGCCTTACCCCCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTAGAAATTTTTACCAACTAGTGCCTAGATGCCTTACCCCCATTC  350

seq1  CTGATGTTATTCCTACTTTGTATTAAATTTAACATCATGCAATTCTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTTATTCCTACTTTGTATTAAATTTAACATCATGCAATTCTTCAG  400

seq1  AGAATATTGAATGATGTCCTATAAAACAATGTGATTTCCATAATCAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTGAATGATGTCCTATAAAACAATGTGATTTCCATAATCAAACT  450

seq1  TTAGGACACAGGTAAGCTTGTCAGTCAGTCTCAGAAGCAATTTTGGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACACAGGTAAGCTTGTCAGTCAGTCTCAGAAGCAATTTTGGAAAA  500

seq1  GATCTGGGATGTAAGAGCATGTAGGAGAACCCTAAGAAGTTACCCTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGGATGTAAGAGCATGTAGGAGAACCCTAAGAAGTTACCCTCCAG  550

seq1  CTCTATTATAAAATATTTTGTTTTGTATCTTCCTTGAAAAACTGGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTATAAAATATTTTGTTTTGTATCTTCCTTGAAAAACTGGAAAAT  600

seq1  TTACAGCTTCTTTCTCTAAGTATGGTATACATTTCAAAGTCATGTTTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTTCTTTCTCTAAGTATGGTATACATTTCAAAGTCATGTTTAGA  650

seq1  AAATGTCTCACCAGTATGTTTATTCTTTAATTCTCAACACATTCAAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTCACCAGTATGTTTATTCTTTAATTCTCAACACATTCAAGAAG  700

seq1  AAAGTCCAACAGTACACATCATAAAATGCCACATTTGTTGCTTCCAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCAACAGTACACATCATAAAATGCCACATTTGTTGCTTCCAACAT  750

seq1  ACTGAAATTCTGAGTGTGGATTGAGCAAAATATACAGATTTTGCTCTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATTCTGAGTGTGGATTGAGCAAAATATACAGATTTTGCTCTGAT  800

seq1  ACTTGTATATCACCACCTGTATTATTAAATTTATTCTGTAATTCTCTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTATATCACCACCTGTATTATTAAATTTATTCTGTAATTCTCTGAT  850

seq1  TTTGAATTAATCCTAACGAGTTATTTGTATCATTTGTTTGGTATCTACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTAATCCTAACGAGTTATTTGTATCATTTGTTTGGTATCTACTG  900

seq1  TGCAGTAAAGCTGGATTTCCACTCTGATTATGAAAATGTGCTAATTTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAAAGCTGGATTTCCACTCTGATTATGAAAATGTGCTAATTTCAT  950

seq1  GCCTCTTTTCAGAATTGAGAGCACTTTCTTAAACATAGTACTGTTCA-TT  999
      ||||||||||||| |||||||||||||  |||||||||||||||||| ||
seq2  GCCTCTTTTCAGATTTGAGAGCACTTTTCTAAACATAGTACTGTTCATTT  1000

seq1  TTGTTCCTCTGCTCAGCA-TTTTATGTCTTTCAGATTAAATATTAAAGAA  1048
      |||||||||||||||||| |||||||||||||||||| |||||||||| |
seq2  TTGTTCCTCTGCTCAGCATTTTTATGTCTTTCAGATT-AATATTAAAG-A  1048

seq1  AAATTTCATGCAGTATATTGTGAGCCTTTAATTCATGGTTTAATTTGAGG  1098
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  AAATTTCATGCAGTATATTGTGAGCCTTTAA-TCATGGTTT-ATTTGAGG  1096

seq1  ACATTAGCAGTCATGTGAT-CTCGGACTTGGGACCAGGTGTT---CTCTT  1144
      ||||||||||||||||||| ||||||||  ||||   |||||   |||| 
seq2  ACATTAGCAGTCATGTGATCCTCGGACT--GGAC--AGTGTTCTCCTCTC  1142

seq1  CTCAGTCTTGGAT  1157
      ||||||| |||||
seq2  CTCAGTC-TGGAT  1154