BAC Information

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BAC

Clone NameB6Ng01-181P14
Chromosome6 (Build37)
Map Location 53,536,387 - 53,657,433
singlet/doubletdoublet
Overlap geneCreb5
Upstream geneHibadh, Tax1bp1, Jazf1, LOC666259, LOC666516, D430007I03
Downstream geneLOC384386, 1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926, Wipf3, Scrn1, Fkbp14, Plekha8, LOC100041292, 2410066E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181P14.bB6Ng01-181P14.g
ACCGA007992GA007993
length4541,108
definitionB6Ng01-181P14.b B6Ng01-181P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,656,974 - 53,657,433)(53,536,387 - 53,537,505)
sequence
tcctgccaagaaaggggctattcaaaagtgtgagaagttgcaattttata
aacacacacacacacacacacacacacacacacacacacacacacctttg
aaaatacccaatggataggagcgctatcttccttgatggagactggaggc
tgactttaggagagcaacatgactggatggaaggaaggtcggaggctcac
actggggagtcggtggcttcgaagggagctgaactggaaaccagcagtgg
atacagttttgctgaaggggtgaaacctggttctgcctcagtgagcgtct
gcggccttctcccacaccctgcttccacctctattactccatccacatga
ctaaggctctgaatcataaccacatgccagagaagctctctagctggggg
tgggcaggggcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgt
gaattcatttatgaagacaagcactggctgtggaccagtgaaccaaaggg
ggttgccagaagtttgtcctgggcagccattcttgaatgccagcggctct
ctggcacccctaagctgactccacgttaggaaaacaaattctctcatcca
tattggactttaagataattgcttttatttatttcacttaacacacacca
ccagcaccgtcaccacacgtggtagaagttatgtcatcttccttatgaag
cagacagtggctctgacaaccagttatgagcaatgaatgccttatttata
aaaaagattacccagcttatgggtttgatgcttgggaactgaaaataaaa
gttaattttttttgacctttctggagagtttaagcaactgaaatcactgg
caaaaaaaaaagaaaaaaaaaaaaaaagaaaagtggaaagcacttaattc
tcataagaacagttgagtggttggtttggcattaacctaaagggaaagtc
agaactcctggaacaaaccatttggtattttcccctttgtgctgtaagag
aaagagtcccagacttcaggaagctctgttaccaacagcagacaagcatc
ctggtgctgctctggtcgaatctctacaggtccataaaccttgcgactct
gtaggtattctcttgtctccttcttctacgtgaagcactatgaactgaca
gcaagcatgaactttcccaatggtcaaatcaatcagaataattatgtctg
acacacacatccccagttatcatgggctatgaatagaagatatgaggcag
gcgttgaacaattacacatatctacaggtacaacatggtatcaagcaggg
gctaccacaccacagactagacatacctcagacttaggactcgagaaagt
tttaagaaaataatgtttaagcaaaggtctaaaggatgatacaaatacaa
aagttgaagatgggataggcagtctaggcataggccacagatgagtcaag
cccttgcacaggagaagacttgtatatttcatgtaataatgaaaggtagt
actacctcagaggtagcacttagcaattaaagggatgctttctcttgggg
gggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_53656974_53657433
seq2: B6Ng01-181P14.b_48_507 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACACTGCCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACTGCCCCTG  50

seq1  CCCACCCCCAGCTAGAGAGCTTCTCTGGCATGTGGTTATGATTCAGAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCAGCTAGAGAGCTTCTCTGGCATGTGGTTATGATTCAGAGCC  100

seq1  TTAGTCATGTGGATGGAGTAATAGAGGTGGAAGCAGGGTGTGGGAGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCATGTGGATGGAGTAATAGAGGTGGAAGCAGGGTGTGGGAGAAGG  150

seq1  CCGCAGACGCTCACTGAGGCAGAACCAGGTTTCACCCCTTCAGCAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGACGCTCACTGAGGCAGAACCAGGTTTCACCCCTTCAGCAAAACT  200

seq1  GTATCCACTGCTGGTTTCCAGTTCAGCTCCCTTCGAAGCCACCGACTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCACTGCTGGTTTCCAGTTCAGCTCCCTTCGAAGCCACCGACTCCC  250

seq1  CAGTGTGAGCCTCCGACCTTCCTTCCATCCAGTCATGTTGCTCTCCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGAGCCTCCGACCTTCCTTCCATCCAGTCATGTTGCTCTCCTAAA  300

seq1  GTCAGCCTCCAGTCTCCATCAAGGAAGATAGCGCTCCTATCCATTGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCTCCAGTCTCCATCAAGGAAGATAGCGCTCCTATCCATTGGGTA  350

seq1  TTTTCAAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400

seq1  TGTTTATAAAATTGCAACTTCTCACACTTTTGAATAGCCCCTTTCTTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATAAAATTGCAACTTCTCACACTTTTGAATAGCCCCTTTCTTGGC  450

seq1  AGGAGAATTC  460
      ||||||||||
seq2  AGGAGAATTC  460

seq1: chr6_53536387_53537505
seq2: B6Ng01-181P14.g_70_1177

seq1  GAATTCATTTATGAAGACAAGCACTGGCTGTGGACCAGTGAACCAAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATGAAGACAAGCACTGGCTGTGGACCAGTGAACCAAAGGG  50

seq1  GGTTGCCAGAAGTTTGTCCTGGGCAGCCATTCTTGAATGCCAGCGGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCAGAAGTTTGTCCTGGGCAGCCATTCTTGAATGCCAGCGGCTCT  100

seq1  CTGGCACCCCTAAGCTGACTCCACGTTAGGAAAACAAATTCTCTCATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACCCCTAAGCTGACTCCACGTTAGGAAAACAAATTCTCTCATCCA  150

seq1  TATTGGACTTTAAGATAATTGCTTTTATTTATTTCACTTAACACACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGACTTTAAGATAATTGCTTTTATTTATTTCACTTAACACACACCA  200

seq1  CCAGCACCGTCACCACACGTGGTAGAAGTTATGTCATCTTCCTTATGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCGTCACCACACGTGGTAGAAGTTATGTCATCTTCCTTATGAAG  250

seq1  CAGACAGTGGCTCTGACAACCAGTTATGAGCAATGAATGCCTTATTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGTGGCTCTGACAACCAGTTATGAGCAATGAATGCCTTATTTATA  300

seq1  AAAAAGATTACCCAGCTTATGGGTTTGATGCTTGGGAACTGAAAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATTACCCAGCTTATGGGTTTGATGCTTGGGAACTGAAAATAAAA  350

seq1  GTTAATTTTTTTTGACCTTTCTGGAGAGTTTAAGCAACTGAAATCACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTTTTTTGACCTTTCTGGAGAGTTTAAGCAACTGAAATCACTGG  400

seq1  CAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAGTGGAAAGCACTTAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAGTGGAAAGCACTTAATTC  450

seq1  TCATAAGAACAGTTGAGTGGTTGGTTTGGCATTAACCTAAAGGGAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGAACAGTTGAGTGGTTGGTTTGGCATTAACCTAAAGGGAAAGTC  500

seq1  AGAACTCCTGGAACAAACCATTTGGTATTTTCCCCTTTGTGCTGTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCTGGAACAAACCATTTGGTATTTTCCCCTTTGTGCTGTAAGAG  550

seq1  AAAGAGTCCCAGACTTCAGGAAGCTCTGTTACCAACAGCAGACAAGCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTCCCAGACTTCAGGAAGCTCTGTTACCAACAGCAGACAAGCATC  600

seq1  CTGGTGCTGCTCTGGTCGAATCTCTACAGGTCCATAAACCTTGCGACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCTGCTCTGGTCGAATCTCTACAGGTCCATAAACCTTGCGACTCT  650

seq1  GTAGGTATTCTCTTGTCTCCTTCTTCTACGTGAAGCACTATGAACTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTATTCTCTTGTCTCCTTCTTCTACGTGAAGCACTATGAACTGACA  700

seq1  GCAAGCATGAACTTTCCCAATGGTCAAATCAATCAGAATAATTATGTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATGAACTTTCCCAATGGTCAAATCAATCAGAATAATTATGTCTG  750

seq1  ACACACACATCCCCAGTTATCATGGGCTATGAATAGAAGATATGAGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATCCCCAGTTATCATGGGCTATGAATAGAAGATATGAGGCAG  800

seq1  GCGTTGAACAATTACACATATCTACAGGTACAACATGGTATCAAGCAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTGAACAATTACACATATCTACAGGTACAACATGGTATCAAGCAGGG  850

seq1  GCTACCACACCACAGACTAGACATACCTCAGACTTAGGACTCGAAGAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCTACCACACCACAGACTAGACATACCTCAGACTTAGGACTCG-AGAAAG  899

seq1  TTTTAAGAAAATAATGTTTAAGCAAAGGTCTAAAGGATGAATAACAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||   |||||  
seq2  TTTTAAGAAAATAATGTTTAAGCAAAGGTCTAAAGGATGA--TACAAA--  945

seq1  AACAAAAG-TGAAGAT-GGATAGGCAGTCTAGGCATAGGCCACAGGATGA  998
       ||||||| ||||||| ||||||||||||||||||||||||||| |||||
seq2  TACAAAAGTTGAAGATGGGATAGGCAGTCTAGGCATAGGCCACA-GATGA  994

seq1  GTCAAGGCCCTGGAACAGGAGAGAACTTGTTATA-TTCATGGAAATTAAT  1047
      ||||| ||||| | ||||||||  ||||| |||| |||||| ||  ||||
seq2  GTCAA-GCCCTTGCACAGGAGAAGACTTG-TATATTTCATGTAA--TAAT  1040

seq1  GAAAAGTAGTACTACCTCCAAGAGGTGTAGCACTTTAGCATTTAAA-GGA  1096
      |||| |||||||||||||  ||||  ||||||| |||||| ||||| |||
seq2  GAAAGGTAGTACTACCTC--AGAG--GTAGCAC-TTAGCAATTAAAGGGA  1085

seq1  TGCTTTCTCTTGGGGGGGGGGGG  1119
      |||||||||||||||||||||||
seq2  TGCTTTCTCTTGGGGGGGGGGGG  1108