BAC Information

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BAC

Clone NameB6Ng01-182I14
Chromosome6 (Build37)
Map Location 3,122,226 - 3,123,399
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039885, LOC100039896
Downstream geneLOC100040185, EG667335, Samd9l, AI987662, Ccdc132, Calcr, LOC100039942, Tfpi2, Gngt1, Gng11, 4930528H21Rik, Bet1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182I14.bB6Ng01-182I14.g
ACCGA008398GA008399
length1,168735
definitionB6Ng01-182I14.b B6Ng01-182I14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctacctggctctgtgctcttctggtctggtctgtatcttcagca
cactgctctccactctggtatcatcctccagggaccacagtgcctacaag
agcactggaaacacacaaaaggaaaggccctgttaggagaaatctacagg
acccatgctggtctgtgctggcacaggccttcaggctgattctgccagag
taatccattgctccattcacacacccttttctagcacccttgcccagcct
caggacactgtcttctgctgtcagcatgtagtccaactttgaaggactcc
acttaggagggaagacaggattggatttttctctaagacagtagctacat
tgccaccaaacccctgagcatggatagtaatttgttgaggtaagggggca
gtcttaaaagtacaaaataactatgggctttcccacctacacaccatttc
ctgaataattacttggaggcttattattaatgtaaaaggcctaggccaca
acttaggcttgtttcctgtctagcttgtaacatatttaacccacttaaac
tataatatgtctgacaagaggcaaattacctctccttgatttcctgtgtc
aatcttccttggagtttgtccagagtaaatctcccacctctgactatctc
ctgtagttacaatccctctactggaacccccccccccactcgatttcctg
gcctttgctgataagtttaactcctggtacacagggtgactcacaacagc
tctaatttcagctccatgtatacatcacctctgtcctccatggctacttt
tactcacatgcatttgaaaaagttgcatctccgacatttatggtaacacc
acctttggctgtctatagaattccacaaaggaatctgatggagagtacaa
gccatgagactcagaagacaaacccataccctaatagcaataattgtaac
caagtacatttctttatggtgtgctctagagataatctcttgtgtactgt
ctggaggtaataatatgtcaattaaaagatgctgctgtgagtctcatcag
ccattgcctaactctgtgatgagggtagacagttttcacaatcatagaag
ataacaactgtattcatcaataattcttaatttttcatgccagaaggtgc
atgaccacttatttttgg

gaattcaaggatgatcctgttattcttactcctgaggattgagacaggga
taaatatacctttgtgggccgtagtgagatcatggccagtacctttactg
gtacattccaattcttctaccttacctttattttttgcaacggaatgtta
tttggatgcgccttgtgcacgacaaactcctcaagagccacgggtgtata
atagtctagttttcatttgaattataaactatgctttgtgcataatgtgg
ataaaccttttacaccctgtatatttttaaagaaaaagattatctctaat
tgggcagatccccttagccaaaataaggtgagctccggagtgttatttaa
tgctttaacgtgaattgctcaaggagtgcaatcacctcaattaatgttgg
aaataacttcacctataaacatcaccactattatgataaaaggaaatgtg
actattcccaaaagatcacgattgcctgttggcaatgctactgctatatg
cagcatagcctggtaccatccagatcttgcatttcatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatctatatatatgtatataagagagatacct
atctatatatagctcgctctctctttacactccccgcgcccccataaaaa
aaaaaaaaaaatatataattatataaaaaaaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_3122226_3123399
seq2: B6Ng01-182I14.b_42_1209 (reverse)

seq1  CCAAAAATAA-TTGTCTATCACCTTCTGACATTGGAAAAATTAAGAATTT  49
      |||||||||| | |||   ||||||||| |||  ||||||||||||||| 
seq2  CCAAAAATAAGTGGTCATGCACCTTCTGGCAT--GAAAAATTAAGAATT-  47

seq1  ATTTAATTGATACAGTTGTTATCTTTCTATGATTGTGAAAACTTGGTCTA  99
        || ||  |||||||||||||| |||||||||||||||||||  |||||
seq2  -ATTGATGAATACAGTTGTTATC-TTCTATGATTGTGAAAACT--GTCTA  93

seq1  CCCTCATCACAGAGTTAGGCAATGGCTGATGAGACTCACAGCAGCATCTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATCACAGAGTTAGGCAATGGCTGATGAGACTCACAGCAGCATCTT  143

seq1  TTAATTGACATA-TATTACCTCCAGACAGTACACAAGAGATTATCTCTAG  198
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTAATTGACATATTATTACCTCCAGACAGTACACAAGAGATTATCTCTAG  193

seq1  AGCACACCATAAAGAAATGTACTTGGTTACAATTATTGCTATTAGGGTAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACCATAAAGAAATGTACTTGGTTACAATTATTGCTATTAGGGTAT  243

seq1  GGGTTTTGTCTTCTGAGTCTCATGGCTTGTACTCTCCATCAGATTCCTTT  298
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGG-TTTGTCTTCTGAGTCTCATGGCTTGTACTCTCCATCAGATTCCTTT  292

seq1  GTGGAATTCTATAGACAGCCAAAGGTGGTGTTACCATAAATGTCGGAGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATTCTATAGACAGCCAAAGGTGGTGTTACCATAAATGTCGGAGAT  342

seq1  GCAACTTTTTCAAATGCATGTGAGTAAAAGTAGCCATGGAGGACAGAGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTTTTCAAATGCATGTGAGTAAAAGTAGCCATGGAGGACAGAGGT  392

seq1  GATGTATACATGGAGCTGAAATTAGAGCTGTTGTGAGTCACCCTGTGTAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATACATGGAGCTGAAATTAGAGCTGTTGTGAGTCACCCTGTGTAC  442

seq1  CAGGAGTTAAACTTATCAGCAAAGGCCAGGAAATCGAGTGGGGGGGGGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTTAAACTTATCAGCAAAGGCCAGGAAATCGAGTGGGGGGGGGGG  492

seq1  TTCCAGTAGAGGGATTGTAACTACAGGAGATAGTCAGAGGTGGGAGATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTAGAGGGATTGTAACTACAGGAGATAGTCAGAGGTGGGAGATTT  542

seq1  ACTCTGGACAAACTCCAAGGAAGATTGACACAGGAAATCAAGGAGAGGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGACAAACTCCAAGGAAGATTGACACAGGAAATCAAGGAGAGGTA  592

seq1  ATTTGCCTCTTGTCAGACATATTATAGTTTAAGTGGGTTAAATATGTTAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTCTTGTCAGACATATTATAGTTTAAGTGGGTTAAATATGTTAC  642

seq1  AAGCTAGACAGGAAACAAGCCTAAGTTGTGGCCTAGGCCTTTTACATTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGACAGGAAACAAGCCTAAGTTGTGGCCTAGGCCTTTTACATTAA  692

seq1  TAATAAGCCTCCAAGTAATTATTCAGGAAATGGTGTGTAGGTGGGAAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGCCTCCAAGTAATTATTCAGGAAATGGTGTGTAGGTGGGAAAGC  742

seq1  CCATAGTTATTTTGTACTTTTAAGACTGCCCCCTTACCTCAACAAATTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTTATTTTGTACTTTTAAGACTGCCCCCTTACCTCAACAAATTAC  792

seq1  TATCCATGCTCAGGGGTTTGGTGGCAATGTAGCTACTGTCTTAGAGAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATGCTCAGGGGTTTGGTGGCAATGTAGCTACTGTCTTAGAGAAAA  842

seq1  ATCCAATCCTGTCTTCCCTCCTAAGTGGAGTCCTTCAAAGTTGGACTACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATCCTGTCTTCCCTCCTAAGTGGAGTCCTTCAAAGTTGGACTACA  892

seq1  TGCTGACAGCAGAAGACAGTGTCCTGAGGCTGGGCAAGGGTGCTAGAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACAGCAGAAGACAGTGTCCTGAGGCTGGGCAAGGGTGCTAGAAAA  942

seq1  GGGTGTGTGAATGGAGCAATGGATTACTCTGGCAGAATCAGCCTGAAGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGTGAATGGAGCAATGGATTACTCTGGCAGAATCAGCCTGAAGGC  992

seq1  CTGTGCCAGCACAGACCAGCATGGGTCCTGTAGATTTCTCCTAACAGGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCAGCACAGACCAGCATGGGTCCTGTAGATTTCTCCTAACAGGGC  1042

seq1  CTTTCCTTTTGTGTGTTTCCAGTGCTCTTGTAGGCACTGTGGTCCCTGGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTTGTGTGTTTCCAGTGCTCTTGTAGGCACTGTGGTCCCTGGA  1092

seq1  GGATGATACCAGAGTGGAGAGCAGTGTGCTGAAGATACAGACCAGACCAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATACCAGAGTGGAGAGCAGTGTGCTGAAGATACAGACCAGACCAG  1142

seq1  AAGAGCACAGAGCCAGGTAGGAATTC  1174
      ||||||||||||||||||||||||||
seq2  AAGAGCACAGAGCCAGGTAGGAATTC  1168


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