BAC Information

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BAC

Clone NameB6Ng01-182L17
Chromosome6 (Build37)
Map Location 34,652,946 - 34,653,566
singlet/doubletsinglet
Overlap genenone
Upstream geneExoc4, Lrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184
Downstream geneCald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182L17.bB6Ng01-182L17.g
ACCGA008545GA008546
length946658
definitionB6Ng01-182L17.b B6Ng01-182L17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcgtttttaatagctcagtagtactccattgtgtaaatgtacc
acattttctgtatctattcctctgttgatggacatctgggttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttattacatgttggaacatcttctgggtatattcccaggagtggtatag
ctgggtcctcaggtagtactatgtccaattttctgaggaactgccaaact
gatttccagagtggttgtaccagcttgcaatcccaccagcaatggaggag
tgttcctctttctccatatccttgccagcatctgctgtcacctgagtttt
tgatcttagccattctgactggtgtgaggtggaatctcagggttgttttg
atttgcatttccctgatgactaaggatgttgaacatttctttaggttctt
ctcagccattcaatattcctgggttgataattctttgtttggctctctac
tccatttttttccatttttattaggtatttagctcatttacatttccaat
gctataccaaaagtcccccatatccacccacccccactcccctgcccacc
cactccccctttttggccctggtgttcccctgtactggggcatataaagt
tctactccattttttaatagagttatttggttctctggagtctaacttct
tgagttttttatataaaattagatattagccctctatcggatggagggtt
ggtaaagatcttttcccaatctgttggttgccgtttagtcctattgacag
tgtcctttgccttacataagctttgcagttttatgaggtcccatttatca
attctttatccttaaagcataagctattgatgatcctgatcaagaaattt
ttccctgtgcccacgtgctcgaagggtcttccctgctttttttcct
gaattcaagaactcacccaccacctctgcagagtcactgcataaggactt
ggttgagtaacagtgggcccactcccaaataactatgctccagtatgtat
tgtgggagggttgggaaggataacttggagacatgccaggaggagacatg
agacctgctacaggaactgagtcaacttggatacagagtgtctgctaaga
aggcccagctttttcaacttgaggttacctatctggggtacatattcaag
ggagccaactcattctgtcagactcccggaggcaaaccatccttagcatc
ccagtcccatcaacccaaaggcaggtatggaaatttctgagatctgccag
gttctgtagacgtcagatgccagggttcactggaaaggccaaactgttat
atgaggccattaggagccaagaagagaatggacccctgagatgggcatgg
ttgttaagactctaggaagagccttattggaggcaccagccttggctctt
ccagacgttcacaaacctttccacctgtatgttcaacataattttctctt
tggctttccctttccttttctcattccttacctcttggaagagaaaaatt
tctatctaagactactactggtcaggacagatggctcatttggataaagt
tgcctaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_34652946_34653566
seq2: B6Ng01-182L17.g_98_722 (reverse)

seq1  GTTAGGC-ACTTTATCC-ACTGAGCCATCTGTCCTGACCAGTAGTAGTCT  48
      ||||||| ||||||||| | ||||||||||||||||||||||||||||||
seq2  GTTAGGCAACTTTATCCAAATGAGCCATCTGTCCTGACCAGTAGTAGTCT  50

seq1  TAGATAGAAA-TTTTCTCTTCCAAGAGGTAAGGAATGAGAAAAGGAAAGG  97
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGAAATTTTTCTCTTCCAAGAGGTAAGGAATGAGAAAAGGAAAGG  100

seq1  GAAAGCCAAAGAG-AAATTATGTTGAACATACAGGTGGAAAGGTTTGTGA  146
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCAAAGAGAAAATTATGTTGAACATACAGGTGGAAAGGTTTGTGA  150

seq1  ACGTCTGGAAGAGCCAAGGCTGGTGCCTCCAATAAGGCTCTTCCTAGAGT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTGGAAGAGCCAAGGCTGGTGCCTCCAATAAGGCTCTTCCTAGAGT  200

seq1  CTTAACAACCATGCCCATCTCAGGGGTCCATTCTCTTCTTGGCTCCTAAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAACCATGCCCATCTCAGGGGTCCATTCTCTTCTTGGCTCCTAAT  250

seq1  GGCCTCATATAACAGTTTGGCCTTTCCAGTGAACCCTGGCATCTGACGTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCATATAACAGTTTGGCCTTTCCAGTGAACCCTGGCATCTGACGTC  300

seq1  TACAGAACCTGGCAGATCTCAGAAATTTCCATACCTGCCTTTGGGTTGAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAACCTGGCAGATCTCAGAAATTTCCATACCTGCCTTTGGGTTGAT  350

seq1  GGGACTGGGATGCTAAGGATGGTTTGCCTCCGGGAGTCTGACAGAATGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGGATGCTAAGGATGGTTTGCCTCCGGGAGTCTGACAGAATGAG  400

seq1  TTGGCTCCCTTGAATATGTACCCCAGATAGGTAACCTCAAGTTGAAAAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCCCTTGAATATGTACCCCAGATAGGTAACCTCAAGTTGAAAAAG  450

seq1  CTGGGCCTTCTTAGCAGACACTCTGTATCCAAGTTGACTCAGTTCCTGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCTTCTTAGCAGACACTCTGTATCCAAGTTGACTCAGTTCCTGTA  500

seq1  GCAGGTCTCATGTCTCCTCCTGGCATGTCTCCAAGTTATCCTTCCCAACC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCTCATGTCTCCTCCTGGCATGTCTCCAAGTTATCCTTCCCAACC  550

seq1  CTCCCACAATACATACTGGAGCATAGTTATTTGGGAGTGGGCCCACTGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACAATACATACTGGAGCATAGTTATTTGGGAGTGGGCCCACTGTT  600

seq1  ACTCAACCAAGTCCTTATGCAGTGA  621
      |||||||||||||||||||||||||
seq2  ACTCAACCAAGTCCTTATGCAGTGA  625