BAC Information

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BAC

Clone NameB6Ng01-182N05
Chromosome6 (Build37)
Map Location 101,949,591 - 101,950,686
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545870, LOC100043321, Pdzrn3
Downstream geneEG666084, Cntn3, EG666123
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182N05.bB6Ng01-182N05.g
ACCGA008613GA008614
length1,0281,093
definitionB6Ng01-182N05.b B6Ng01-182N05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaatactcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataactttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatgtgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctctcttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactggtctgtctctgtaccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgctattccagatg
aatttgcaaattgctccttctaactccttgaagaagtgagttggaatttt
gatggggattgcattgaatctgtagatttgcttttggccaagatagccat
ttttacaatgttgatcctacccaatccatgagcatgggagatctttccat
cttctgagatcttctttaatttctttcttcaaagatttgaaggtttatca
tatagatctttcacttccttagttagaagtcacgcccagatattttacat
atatgtgactattgagaagggtgttgttgccactaattctttctcgaccc
gtttattctctgataatgaggataaagg

gaattccaaactagatctttattaaatattttcacttacaatcagtcaga
aaaatgacaagttgctttatatttgaaaaaagaaagagcaaagtgcgctg
gacctaaataataagtgactggctacagatcagcttcttccgtctgaatg
tggcaacagctaaagcaagggatggagctgtgtatggctcagtgttcaag
agtggcttcaaatatttggaactcagtgctaggggatctaatatctgctt
ctcgcttctgcaggcacatgcacgcacatgccatacactcacacaggcaa
acatacacatgaaaacaaaaaaataaataataactacagtggatccttgg
atattggtgatatacttttttacctaaaagtaacacaaacagcttgaatt
tgccttgggaccacaatttcatatatctccaatttttcttcatgctctcc
tatgagagctttgaaagataaattaatgcaaccttcttctaaaaaagaaa
agaaattagttaaaatccaggattttacaaagtaaggctttaaaaaaaat
cttgaaagtacttaagattagcatttgagtttgtgcaaggaggtacacac
tcagttcctaaggaaagctttaggtcaaggcaagtgaacattatgtaaaa
ttctcaggagaaatacatcctgccattcccaaaagaaagcagattttcac
cagatgagaacttttcttcttctagataacatgaaggaccattctgattt
tgaagtatagagtcaggcatactttcagaagcacatcttcatctctggtg
acatttgcatttacctgtaagtagctttacttcattatgaaactatgtag
agtcatccttcatgcacaggattatagaaagtgagactcttgctttgatc
agaaagtttaatgggacacttctgctatcagaaccaagacaaatctgata
gaattattgaaaaatcagaataaaacaaagtttattagtggatcaattat
aactttttaaagcaaaatccctgttgatctcaatttatcgtagcaattgg
cagtaccatttgcctccccctgctcaagggggtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_101949591_101950686
seq2: B6Ng01-182N05.g_64_1156

seq1  GAATTCCAAACTAGATCTTTATTAAATATTTTCACTTACAATCAGTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACTAGATCTTTATTAAATATTTTCACTTACAATCAGTCAGA  50

seq1  AAAATGACAAGTTGCTTTATATTTGAAAAAAGAAAGAGCAAAGTGCGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACAAGTTGCTTTATATTTGAAAAAAGAAAGAGCAAAGTGCGCTG  100

seq1  GACCTAAATAATAAGTGACTGGCTACAGATCAGCTTCTTCCGTCTGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAATAATAAGTGACTGGCTACAGATCAGCTTCTTCCGTCTGAATG  150

seq1  TGGCAACAGCTAAAGCAAGGGATGGAGCTGTGTATGGCTCAGTGTTCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACAGCTAAAGCAAGGGATGGAGCTGTGTATGGCTCAGTGTTCAAG  200

seq1  AGTGGCTTCAAATATTTGGAACTCAGTGCTAGGGGATCTAATATCTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTTCAAATATTTGGAACTCAGTGCTAGGGGATCTAATATCTGCTT  250

seq1  CTCGCTTCTGCAGGCACATGCACGCACATGCCATACACTCACACAGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTTCTGCAGGCACATGCACGCACATGCCATACACTCACACAGGCAA  300

seq1  ACATACACATGAAAACAAAAAAATAAATAATAACTACAGTGGATCCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACATGAAAACAAAAAAATAAATAATAACTACAGTGGATCCTTGG  350

seq1  ATATTGGTGATATACTTTTTTACCTAAAAGTAACACAAACAGCTTGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGTGATATACTTTTTTACCTAAAAGTAACACAAACAGCTTGAATT  400

seq1  TGCCTTGGGACCACAATTTCATATATCTCCAATTTTTCTTCATGCTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGGGACCACAATTTCATATATCTCCAATTTTTCTTCATGCTCTCC  450

seq1  TATGAGAGCTTTGAAAGATAAATTAATGCAACCTTCTTCTAAAAAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGAGCTTTGAAAGATAAATTAATGCAACCTTCTTCTAAAAAAGAAA  500

seq1  AGAAATTAGTTAAAATCCAGGATTTTACAAAGTAAGGCTTTAAAAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAGTTAAAATCCAGGATTTTACAAAGTAAGGCTTTAAAAAAAAT  550

seq1  CTTGAAAGTACTTAAGATTAGCATTTGAGTTTGTGCAAGGAGGTACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGTACTTAAGATTAGCATTTGAGTTTGTGCAAGGAGGTACACAC  600

seq1  TCAGTTCCTAAGGAAAGCTTTAGGTCAAGGCAAGTGAACATTATGTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCCTAAGGAAAGCTTTAGGTCAAGGCAAGTGAACATTATGTAAAA  650

seq1  TTCTCAGGAGAAATACATCCTGCCATTCCCAAAAGAAAGCAGATTTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGAGAAATACATCCTGCCATTCCCAAAAGAAAGCAGATTTTCAC  700

seq1  CAGATGAGAACTTTTCTTCTTCTAGATAACATGAAGGACCATTCTGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAGAACTTTTCTTCTTCTAGATAACATGAAGGACCATTCTGATTT  750

seq1  TGAAGTATAGAGTCAGGCATACTTTCAGAAGCACATCTTCATCTCTGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTATAGAGTCAGGCATACTTTCAGAAGCACATCTTCATCTCTGGTG  800

seq1  ACATTTGCATTTACCTGTAAGTAGCTTTACTTCATTATGAAACTATGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGCATTTACCTGTAAGTAGCTTTACTTCATTATGAAACTATGTAG  850

seq1  AGTCATCCTTCATGCACAGGA-TATAGAAGGTGAGACTCTTGCTTTGATC  899
      ||||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  AGTCATCCTTCATGCACAGGATTATAGAAAGTGAGACTCTTGCTTTGATC  900

seq1  AGAAAGTTTAATGGGACACTTCTGCTATCAAGAACCAAGACAAATCTGAT  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGAAAGTTTAATGGGACACTTCTGCTATC-AGAACCAAGACAAATCTGAT  949

seq1  AGAA-TATTGAAAAATCAGAATAAAAAACAAAGTTTA-TAGTGGATCAAA  997
      |||| |||||||||||||||||  ||||||||||||| ||||||||||| 
seq2  AGAATTATTGAAAAATCAGAAT--AAAACAAAGTTTATTAGTGGATCAAT  997

seq1  TATTAAACTTTTTAAAAGGCAAAAAATCCCTGTTGATCTCAATTTATTCG  1047
      |||  |||||||||||  ||  |||||||||||||||||||||||| |||
seq2  TAT--AACTTTTTAAA--GC--AAAATCCCTGTTGATCTCAATTTA-TCG  1040

seq1  TAGCAATTGGCAGTAACCATTTGC--TCCCCTG-TCA--GGGGTGTGTGT  1092
      |||||||||||||| |||||||||   |||||| |||  |||||||||||
seq2  TAGCAATTGGCAGT-ACCATTTGCCTCCCCCTGCTCAAGGGGGTGTGTGT  1089

seq1  GTGT  1096
      ||||
seq2  GTGT  1093


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