BAC Information

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BAC

Clone NameB6Ng01-185C23
Chromosome6 (Build37)
Map Location 120,602,896 - 120,769,151
singlet/doubletdoublet
Overlap geneCecr2, Slc25a18, Atp6v1e1
Upstream geneErc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik
Downstream geneBcl2l13, Bid, Mical3, LOC100043793, Minpp1-ps, Pex26, Tuba8, Usp18, Slc6a13, Slc6a12, Iqsec3, LOC100043486, A2m, EG640530
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185C23.bB6Ng01-185C23.g
ACCGA010366GA010367
length1,084681
definitionB6Ng01-185C23.b B6Ng01-185C23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,768,074 - 120,769,151)(120,602,896 - 120,603,576)
sequence
gaattcagggcagggactggaggccggggatgaacaactgtcttaagggt
ttgttcttcatggcttgctcagcatgcttttctgtgtatcccaggaccac
ctgcacagatgtggcaccacccgcaatgggctgagccctcccacatgaaa
tcactaagccagaaatgtcactcaggcttgggtaaagcacctcttggcaa
gcctgacagtctgagttcactccctgggatgcacatggtagaaggagagg
gctgacttctctgtggcgtatgcacactcgcaaacaaatggggaaagaga
atccaggggcttaggtgcttggtagaggaggtacaaagtaccctgggaac
acaacagtggggggttcaggaggtggcactaagctggggcctgaggtggt
gttagccaggtggagactggttcaggtggaagatggggcatatttaaaca
ccctcaggtgaggaggacctgacatgagaggccatgataacagctgcatc
tgtagaggcttccgttgttggtttgttccggatggtgcttcagagggagg
tagcagtcaggcttgtatcttctacagcctgcactggccacgggatcctg
attgccacggaaagtgccacgtagacaggcaggcctggaacttggtaatc
ctcttgtgactacctaatgactgtgaagttacgtgtcattgacttctctt
actgaattaaaacataatgtctcttctcttttagattaagcacatgatgg
ctttcattgaacaagaagccaatgagaaagcagaagaaatagatgcaaag
gtgagattgttgttgttgttgttgcttttctcaacacaagatttctctta
gtggcctttgactgtcctggaactggctttgtctgtagagcaggtggcgc
tcacaggggtgcctgcctccgcctcccgggtgctgggactagaggcatgt
ttcaccactgtccagatgtgtcttgcttttattatgtcatacaaaggaaa
cttagtttcattagatatttacactattatttttttaggctcaaaatgtt
gttttattgggaaggtttcccactcatcttgaat
gaattcagagaggaattctggagcagggagaagcttgaacagggactaca
taacccaggcggtcgaggctggctttcagatgcagcttgtggaagagaat
gtagcaggcaacaaaatctgacagggattctcttttattcttcttcgggg
ctgagtgtggggtacggggcttcatgcttgcagggaagcctttctgatga
ggatatcagtcttggatcaaggaggggcacatggaaaaaaatgacgtccg
aaacacatttttgtatcccatccatccagtacgaagttcagcaacctcta
aaataatctctcactatgtgtggtattaaagccatgtggggcagtggagg
agcccttgtctagcatcattgaagtcattaacactagtcctattagcatc
taaacaaaagaaactactgttgactgtcagatatgacccagtctgggcca
ggcatagtggtgcacacctttaatcccagcattctggagacagaggcagg
cagatctctgagtttgaggccagcctggtctacagagtgtgttccaggac
agccagcactacacagagaaatcctgtcttgaaaaaacaaaagcaaaaaa
agagagaccatgtttgaaagaaaaagtcttggggctgaagagataattca
gtggttaagaatactgttgctcagcgggtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_120768074_120769151
seq2: B6Ng01-185C23.b_46_1129 (reverse)

seq1  ATTCAAGATGAGTGGG-AACCTTCCCAATAAA--CACATTTTG-GACTAA  46
      |||||||||||||||| |||||||||||||||   |||||||| | ||||
seq2  ATTCAAGATGAGTGGGAAACCTTCCCAATAAAACAACATTTTGAGCCTAA  50

seq1  AAAAATAATAAGTGT-AATATCTAATGAAACT-AGTTT-CTTTGTATGAC  93
      ||||||||| ||||| |||||||||||||||| ||||| |||||||||||
seq2  AAAAATAAT-AGTGTAAATATCTAATGAAACTAAGTTTCCTTTGTATGAC  99

seq1  ATAATAAAAGCAAGACACATCCTGGACAGTGGTGAAACATGCCTCTAGTC  143
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATAATAAAAGCAAGACACAT-CTGGACAGTGGTGAAACATGCCTCTAGTC  148

seq1  CCAGCACCCGGGAGGCGGAGGCAGGCACCCCTGTGAGCGCCACCTGCTCT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCCGGGAGGCGGAGGCAGGCACCCCTGTGAGCGCCACCTGCTCT  198

seq1  ACAGACAAAGCCAGTTCCAGGACAGTC-AAGGCCACTAAGAGAAATCTTG  242
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACAGACAAAGCCAGTTCCAGGACAGTCAAAGGCCACTAAGAGAAATCTTG  248

seq1  TGTTGAGAAAAGCAACAACAACAACAACAATCTCACCTTTGCATCTATTT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGAAAAGCAACAACAACAACAACAATCTCACCTTTGCATCTATTT  298

seq1  CTTCTGCTTTCTCATTGGCTTCTTGTTCAATGAAAGCCATCATGTGCTTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTTTCTCATTGGCTTCTTGTTCAATGAAAGCCATCATGTGCTTA  348

seq1  ATCTAAAAGAGAAGAGACATTATGTTTTAATTCAGTAAGAGAAGTCAATG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGAGAAGAGACATTATGTTTTAATTCAGTAAGAGAAGTCAATG  398

seq1  ACACGTAACTTCACAGTCATTAGGTAGTCACAAGAGGATTACCAAGTTCC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTAACTTCACAGTCATTAGGTAGTCACAAGAGGATTACCAAGTTCC  448

seq1  AGGCCTGCCTGTCTACGTGGCACTTTCCGTGGCAATCAGGATCCCGTGGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGCCTGTCTACGTGGCACTTTCCGTGGCAATCAGGATCCCGTGGC  498

seq1  CAGTGCAGGCTGTAGAAGATACAAGCCTGACTGCTACCTCCCTCTGAAGC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCAGGCTGTAGAAGATACAAGCCTGACTGCTACCTCCCTCTGAAGC  548

seq1  ACCATCCGGAACAAACCAACAACGGAAGCCTCTACAGATGCAGCTGTTAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCGGAACAAACCAACAACGGAAGCCTCTACAGATGCAGCTGTTAT  598

seq1  CATGGCCTCTCATGTCAGGTCCTCCTCACCTGAGGGTGTTTAAATATGCC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCTCTCATGTCAGGTCCTCCTCACCTGAGGGTGTTTAAATATGCC  648

seq1  CCATCTTCCACCTGAACCAGTCTCCACCTGGCTAACACCACCTCAGGCCC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTCCACCTGAACCAGTCTCCACCTGGCTAACACCACCTCAGGCCC  698

seq1  CAGCTTAGTGCCACCTCCTGAACCCCCCACTGTTGTGTTCCCAGGGTACT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAGTGCCACCTCCTGAACCCCCCACTGTTGTGTTCCCAGGGTACT  748

seq1  TTGTACCTCCTCTACCAAGCACCTAAGCCCCTGGATTCTCTTTCCCCATT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCTCCTCTACCAAGCACCTAAGCCCCTGGATTCTCTTTCCCCATT  798

seq1  TGTTTGCGAGTGTGCATACGCCACAGAGAAGTCAGCCCTCTCCTTCTACC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCGAGTGTGCATACGCCACAGAGAAGTCAGCCCTCTCCTTCTACC  848

seq1  ATGTGCATCCCAGGGAGTGAACTCAGACTGTCAGGCTTGCCAAGAGGTGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATCCCAGGGAGTGAACTCAGACTGTCAGGCTTGCCAAGAGGTGC  898

seq1  TTTACCCAAGCCTGAGTGACATTTCTGGCTTAGTGATTTCATGTGGGAGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCAAGCCTGAGTGACATTTCTGGCTTAGTGATTTCATGTGGGAGG  948

seq1  GCTCAGCCCATTGCGGGTGGTGCCACATCTGTGCAGGTGGTCCTGGGATA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCCCATTGCGGGTGGTGCCACATCTGTGCAGGTGGTCCTGGGATA  998

seq1  CACAGAAAAGCATGCTGAGCAAGCCATGAAGAACAAACCCTTAAGACAGT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAAGCATGCTGAGCAAGCCATGAAGAACAAACCCTTAAGACAGT  1048

seq1  TGTTCATCCCCGGCCTCCAGTCCCTGCCCTGAATTC  1078
      ||||||||||||||||||||||||||||||||||||
seq2  TGTTCATCCCCGGCCTCCAGTCCCTGCCCTGAATTC  1084

seq1: chr6_120602896_120603576
seq2: B6Ng01-185C23.g_65_745

seq1  GAATTCAGAGAGGAATTCTGGAGCAGGGAGAAGCTTGAACAGGGACTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAGGAATTCTGGAGCAGGGAGAAGCTTGAACAGGGACTACA  50

seq1  TAACCCAGGCGGTCGAGGCTGGCTTTCAGATGCAGCTTGTGGAAGAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCAGGCGGTCGAGGCTGGCTTTCAGATGCAGCTTGTGGAAGAGAAT  100

seq1  GTAGCAGGCAACAAAATCTGACAGGGATTCTCTTTTATTCTTCTTCGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGGCAACAAAATCTGACAGGGATTCTCTTTTATTCTTCTTCGGGG  150

seq1  CTGAGTGTGGGGTACGGGGCTTCATGCTTGCAGGGAAGCCTTTCTGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGTGGGGTACGGGGCTTCATGCTTGCAGGGAAGCCTTTCTGATGA  200

seq1  GGATATCAGTCTTGGATCAAGGAGGGGCACATGGAAAAAAATGACGTCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCAGTCTTGGATCAAGGAGGGGCACATGGAAAAAAATGACGTCCG  250

seq1  AAACACATTTTTGTATCCCATCCATCCAGTACGAAGTTCAGCAACCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATTTTTGTATCCCATCCATCCAGTACGAAGTTCAGCAACCTCTA  300

seq1  AAATAATCTCTCACTATGTGTGGTATTAAAGCCATGTGGGGCAGTGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCTCTCACTATGTGTGGTATTAAAGCCATGTGGGGCAGTGGAGG  350

seq1  AGCCCTTGTCTAGCATCATTGAAGTCATTAACACTAGTCCTATTAGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGTCTAGCATCATTGAAGTCATTAACACTAGTCCTATTAGCATC  400

seq1  TAAACAAAAGAAACTACTGTTGACTGTCAGATATGACCCAGTCTGGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAAGAAACTACTGTTGACTGTCAGATATGACCCAGTCTGGGCCA  450

seq1  GGCATAGTGGTGCACACCTTTAATCCCAGCATTCTGGAGACAGAGGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGTGGTGCACACCTTTAATCCCAGCATTCTGGAGACAGAGGCAGG  500

seq1  CAGATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGTGTTCCAGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGTGTTCCAGGAC  550

seq1  AGCCAGCACTACACAGAGAAATCCTGTCTTGAAAAAACAAAAGCAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCACTACACAGAGAAATCCTGTCTTGAAAAAACAAAAGCAAAAAA  600

seq1  AGAGAGACCATGTTTGAAAGAAAAAGTCTTGGGGCTGAAGAGATAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACCATGTTTGAAAGAAAAAGTCTTGGGGCTGAAGAGATAATTCA  650

seq1  GTGGTTAAGAATACTGTTGCTCAGCGGGTAA  681
      |||||||||||||||||||||||||||||||
seq2  GTGGTTAAGAATACTGTTGCTCAGCGGGTAA  681