BAC Information

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BAC

Clone NameB6Ng01-185L19
Chromosome6 (Build37)
Map Location 3,645,379 - 3,645,938
singlet/doubletsinglet
Overlap geneCalcr
Upstream geneLOC100039885, LOC100039896, LOC100040185, EG667335, Samd9l, AI987662, Ccdc132
Downstream geneLOC100039942, Tfpi2, Gngt1, Gng11, 4930528H21Rik, Bet1, LOC667381, LOC100039965, Col1a2, Casd1, Sgce
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185L19.bB6Ng01-185L19.g
ACCGA010768GA010769
length5541,197
definitionB6Ng01-185L19.b B6Ng01-185L19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cattccggtttggatcctggatttggaaacatgttttttaacccagatgc
tcttcatgttccccaaagactagttagtgcccagaaattagctttggggg
catgctttctgcgtcctaactttgaggagtattttcaaaatatcagttgt
gcattattttattgatattgtaaagtctaaaacccacattaccattttat
attttcaacatgaaaccatatattgccaacagaaagtttttctgttctat
tacatcttttaacatctctttgaaacattttttcttgaaaagttctttga
ggatacctttacttgtgttcctcccacacaaagacaatgttatttcaagt
tctaagtgaaggctattattttaaaacctgctactccaatggtctcaatt
gtttcaggggagttgtatttggcattctgagtttgtttgttttttaatgg
taaggagtgtggtggattttagttttctccccccacccccttccttcttt
tcttctgtgtgtgcgagagcaatcatgtgtttgagtgtgtgtgtgggtag
aagt
gaattcacaaaggcctagtgaataggtgggtttaccatgaaagaattagg
gaatcctcctgagacaggtttcttcactaggcccaaagaaacagtataaa
ccaggcatttactaagaatccctggtggtgggcttaacaatagactagca
ttacacctgactcccttcttagtggtgttgtatgccagcctgcggcctac
atgaactgggtacacctgggagtcaggctggggctgaaagagacattctg
ttcaaggcctgcgagtttactaagagaccgtgcttataagggggaaggac
catccccaccaagccccaccagtccactcttggtgcctggagccattctg
tcagcactcggttgccaggttgtttgcttattcagaaatctctcaggaag
acaggttcagcctcttggcaggtagcagaatctcagggcagttgtcactt
caaaaaggagccagccaagtcagaaatctgcaccacaggtggccccacct
cagtggcgacaaggtttgtaccagcctgcttcaggctggaggaggctaca
attcctccctaaatatataatgaaaatagctggactgagacataagattt
atttgtgctccatagtcctgcctgggagttatggtggctggtggccacgc
ctattttaggatctcagattttcccaaggcattcttatccatcaaggaga
atatatgcagcttgtttgtgtttattttgcacaaacatggctctgtggtg
tattattaacaaaccacagcacctcaacatatacctctgtcttaaattga
tatggcttcaaaatctgggttgcccttcattgactaaccagcccttcata
gcacacccttattccccaatcagacccaagcaacaatatatactgaatat
gcttcttcatattgatgaattttctgcccaccctgcacttgcctggagga
cgctgcacacttgctgggaatcagactgtggaggtggtggcctgactgac
ctgcttgaaaaaccacagggataaaaggcttcctttgttggaagcccagg
tacttttattcagttgcaattagcaacaaattccaggctcaagaactcct
ggaacctcccagtgtggggggggaagcctgggcatggagaattagcgaaa
ctggttcaaggaaattctctctcgtaaaagagcgtgtaagaggcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_3645379_3645938
seq2: B6Ng01-185L19.b_45_604

seq1  GAATTCCATTCCGGTTTGGATCCTGGATTTGGAAACATGTTTTTTAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCCGGTTTGGATCCTGGATTTGGAAACATGTTTTTTAACCC  50

seq1  AGATGCTCTTCATGTTCCCCAAAGACTAGTTAGTGCCCAGAAATTAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCTTCATGTTCCCCAAAGACTAGTTAGTGCCCAGAAATTAGCTT  100

seq1  TGGGGGCATGCTTTCTGCGTCCTAACTTTGAGGAGTATTTTCAAAATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCATGCTTTCTGCGTCCTAACTTTGAGGAGTATTTTCAAAATATC  150

seq1  AGTTGTGCATTATTTTATTGATATTGTAAAGTCTAAAACCCACATTACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGCATTATTTTATTGATATTGTAAAGTCTAAAACCCACATTACCA  200

seq1  TTTTATATTTTCAACATGAAACCATATATTGCCAACAGAAAGTTTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATTTTCAACATGAAACCATATATTGCCAACAGAAAGTTTTTCTG  250

seq1  TTCTATTACATCTTTTAACATCTCTTTGAAACATTTTTTCTTGAAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTACATCTTTTAACATCTCTTTGAAACATTTTTTCTTGAAAAGTT  300

seq1  CTTTGAGGATACCTTTACTTGTGTTCCTCCCACACAAAGACAATGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGATACCTTTACTTGTGTTCCTCCCACACAAAGACAATGTTATT  350

seq1  TCAAGTTCTAAGTGAAGGCTATTATTTTAAAACCTGCTACTCCAATGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTCTAAGTGAAGGCTATTATTTTAAAACCTGCTACTCCAATGGTC  400

seq1  TCAATTGTTTCAGGGGAGTTGTATTTGGCATTCTGAGTTTGTTTGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGTTTCAGGGGAGTTGTATTTGGCATTCTGAGTTTGTTTGTTTTT  450

seq1  TAATGGTAAGGAGTGTGGTGGATTTTAGTTTTCTCCCCCCACCCCCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTAAGGAGTGTGGTGGATTTTAGTTTTCTCCCCCCACCCCCTTCC  500

seq1  TTCTTTTCTTCTGTGTGTGCGAGAGCAATCATGTGTTTGAGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTCTGTGTGTGCGAGAGCAATCATGTGTTTGAGTGTGTGTGT  550

seq1  GGGTAGAAGT  560
      ||||||||||
seq2  GGGTAGAAGT  560