BAC Information

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BAC

Clone NameB6Ng01-188O07
Chromosome6 (Build37)
Map Location 11,825,122 - 11,825,228
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667650, AA545190
Downstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879, Thsd7a, LOC667735
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188O07.bB6Ng01-188O07.g
ACCGA013065GA013066
length1,243589
definitionB6Ng01-188O07.b B6Ng01-188O07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatattgaatggccaagaagcacctaaagaaaag
ttcagcatccttagtcatcaggaaaatgcaagtcacactgaaagatccca
agaggagcccctcactcaagcctccggactatagcagacctcctagaact
caggagagaccaagctcggtgtaaaccacatgtggcttttttttctggga
aagcagagctcgggggatgactcatatcccatgtagggtagacgagtcaa
ccacaaggggaaaggggtcccagtttttataggcagtcagggtagaaagg
agaaggggggaatcggggatttccagatgtaaacaatgtctattctcaag
aaatgtgtatgggagtggtacaaggaaagagtctggtgcaggtgtagcac
tccagattggcccagctatgtttgctagggagatttttcgactcattccc
agcaaccaatatcacaaacacctggcagtgaggtgcaacagtgggctcat
acctgggttcatggataggtcaaaacattggcagacaaagggttcaagga
gtggccagagcattgtgcacctctatttttctaaatcagtgaagctactt
ctgctaacaatgaaatctattttgccaatttcagggtttctgtgacattt
tacattctctcaggatcattcaaatccacctcacaccagtcagaatggct
aaaataaaaaaggtcaggtgacagcagatgcagactgtgctgtaaagaat
aaataagtgttgctgaggatgggtccaaacaccacactctgccctctccc
acacaaatatgcctgtttggacatatcacccttatggaaaatggggacag
agatttttataagtgaaggaaggtaaatgaaaaaaatctatacattaact
tgtaggccatctcagctctttattcttcctgccctttgacaaccatgaaa
aggtaacctctccgaaggagagatgctcctactttctaggaggaggtgcc
cagctaaacatctcaccaggtgaatattggatattttcttacatccacca
ctaggagatcttggacggccactgctatcatctaatgagatggtccggtt
ccctttatgttgcccatgcccacggaaccttcctcaggtgactatcagga
accatgaagatgtttttacggaggtgatgaagaactaatcctaggattac
aggaacgagcttctaggtggagcataagaatattgatcactct
gaattctcttcagtttctcctccccctactcctcctcctccccatcctct
cctcctccttcttctcctcttcatcctctttctcctcctccccctcccct
cctcccccttctccttctcctacttctcctcctctccttcttctccttct
tctcctccttctcctcctcttcctcctccttcaactcctccctctcctcc
tcctgctttgtctcctcctccccccgcttcttctcctcctcttccttctc
ctcctcctccttctactcctccctctcctcctcccccttcttctcctcct
ccttctcctcctccccttatcctcctcctctttctcctcctccccttctc
ctcttccttctcctcctcttcctcctccttctactcctccctctcctcct
cctgcttcgtctcctcctccctccccctcttcttctcctcctcttccttc
tactcctccctctcctcctcccattcttctccttctcgtcctcccccttc
tcctcgtccttctcctcctctaccgtcctacgcctcgcccttctcctcct
cccccttctcatcttcctccttctcctcctccttctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11825122_11825228
seq2: B6Ng01-188O07.g_299_658 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  AGGAGAAGGAGGAGGAGAAGGAGGAAGATGAGAAGGGGGAGGAGGAGAAG  50

seq1  --------------------------------------------------  0
                                                        
seq2  GGCGAGGCGTAGGACGGTAGAGGAGGAGAAGGACGAGGAGAAGGGGGAGG  100

seq1  --------------------------------------------------  0
                                                        
seq2  ACGAGAAGGAGAAGAATGGGAGGAGGAGAGGGAGGAGTAGAAGGAAGAGG  150

seq1  --------------------------------------------------  0
                                                        
seq2  AGGAGAAGAAGAGGGGGAGGGAGGAGGAGACGAAGCAGGAGGAGGAGAGG  200

seq1  --------------------------------------------------  0
                                                        
seq2  GAGGAGTAGAAGGAGGAGGAAGAGGAGGAGAAGGAAGAGGAGAAGGGGAG  250

seq1  -AGGAGAAAAAGGAGGAGGAGAAGGAGGAGGAAGAGGAGAAGGAGGAGGA  49
       |||||||| |||||||||| ||||    ||| |||||||||||||||||
seq2  GAGGAGAAAGAGGAGGAGGATAAGG----GGAGGAGGAGAAGGAGGAGGA  296

seq1  GGAGGAGAAGGAGGAGGAGAAGGAGG------AGGAGGAGGAGGAGAAGG  93
      | || ||  ||||||||||| |||||      ||||||||||||||||||
seq2  GAAGAAGGGGGAGGAGGAGAGGGAGGAGTAGAAGGAGGAGGAGGAGAAGG  346

seq1  AAGAGGAGGAGAAG  107
      ||||||||||||||
seq2  AAGAGGAGGAGAAG  360