BAC Information

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BAC

Clone NameB6Ng01-189G01
Chromosome6 (Build37)
Map Location 16,059,515 - 16,060,241
singlet/doubletsinglet
Overlap genenone
Upstream geneFoxp2, Mdfic
Downstream geneLOC100041116, Tcfec, EG435881, Tes, EG232599
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189G01.bB6Ng01-189G01.g
ACCGA013418GA013419
length918729
definitionB6Ng01-189G01.b B6Ng01-189G01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccacattttttaatggggttatttgatt
ttctggagttcaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtagcct
ttttgtcttattgatggtgtcttttgccttacagaagctttgcagattca
tgaggtcccatttgtcaattctcgatcttacagcacaagtcattgctgtt
ctattcaggactttttcccctgtgcccatatcttcgaggcttttccccac
ttcctcctctataagtttcaatgtctctggttttatgtggaattcctgga
ttcacttagatttgaccttagtacaagcagatgggaatggatcaattcac
attcttctatatgataacaaccagttgtgccagcaccatttgttgaaaag
gatgtcttttttccaatggatggttttagctgccttgtcgaagatcaagt
gactataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctatttgtctgtcattataccagtaccatgcagtgtttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttcttgttattccagat
gaaattgcagattgctctttctaattcgttgaagaattgagttggaattt
tgggtggggattgcattgaatctatagattgcttttgccaaggtagccat
ttttacaatgttgatcctgccaattccatgagcatgggagatctttccat
ctttctgagatccttctttaattttttttcttcagagacttgaagttctt
tatcataacagatctttt

gaattccaaattccatctccagaaattatgattaagcatgatgtggaggg
gtaaagtacaacaggtgagaaagctaccagtttaagagacttgacttgtc
ctaacaatgagaaatcgataggttcttagattgcaatagctgtattacat
taaattcaagcattgaaaaggattggttgtggtttcagagaaatctattc
ctgtgcattgttcagttatctgtgtaactttcttaataatagagcatcct
ttaaagaaaggaggatgagaaaacagagtccagtaaatgcagagccaaca
tgaggcctagagagcaaagtgagagcctcagtgatttcttagagggtgac
taccagaccatcaagatcataaacacaacacatcggaaaaaccttccatg
agtttaatgtgatgtttcctggtaattaagaactttaatataagtttgta
gtgaaagcattttcccatattccaggaattcccatgacgactaggaaagg
ccgaagaggaatatgccactcaaaactattctgagaaataatcacctgtg
ggaattcataaaaaaatgtggatggattaaggtgtcaaatttgtactcaa
aggagcttggctaataactggcttaatggcaatgctgtgaagcaataaag
aaacagataaagaaatagctgatggattcttcactgtgtgatgtaaaagt
tcttagttaccatgggggggggggtggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_16059515_16060241
seq2: B6Ng01-189G01.g_62_790

seq1  GAATTCCAAATTCCATCTCCAGAAATTATGATTAAGCATGATGTGGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATTCCATCTCCAGAAATTATGATTAAGCATGATGTGGAGGG  50

seq1  GTAAAGTACAACAGGTGAGAAAGCTACCAGTTTAAGAGACTTGACTTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTACAACAGGTGAGAAAGCTACCAGTTTAAGAGACTTGACTTGTC  100

seq1  CTAACAATGAGAAATCGATAGGTTCTTAGATTGCAATAGCTGTATTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAATGAGAAATCGATAGGTTCTTAGATTGCAATAGCTGTATTACAT  150

seq1  TAAATTCAAGCATTGAAAAGGATTGGTTGTGGTTTCAGAGAAATCTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCAAGCATTGAAAAGGATTGGTTGTGGTTTCAGAGAAATCTATTC  200

seq1  CTGTGCATTGTTCAGTTATCTGTGTAACTTTCTTAATAATAGAGCATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATTGTTCAGTTATCTGTGTAACTTTCTTAATAATAGAGCATCCT  250

seq1  TTAAAGAAAGGAGGATGAGAAAACAGAGTCCAGTAAATGCAGAGCCAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAAGGAGGATGAGAAAACAGAGTCCAGTAAATGCAGAGCCAACA  300

seq1  TGAGGCCTAGAGAGCAAAGTGAGAGCCTCAGTGATTTCTTAGAGGGTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCTAGAGAGCAAAGTGAGAGCCTCAGTGATTTCTTAGAGGGTGAC  350

seq1  TACCAGACCATCAAGATCATAAACACAACACATCGGAAAAACCTTCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGACCATCAAGATCATAAACACAACACATCGGAAAAACCTTCCATG  400

seq1  AGTTTAATGTGATGTTTCCTGGTAATTAAGAACTTTAATATAAGTTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATGTGATGTTTCCTGGTAATTAAGAACTTTAATATAAGTTTGTA  450

seq1  GTGAAAGCATTTTCCCATATTCCAGGAATTCCCATGACGACTAGGAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGCATTTTCCCATATTCCAGGAATTCCCATGACGACTAGGAAAGG  500

seq1  CCGAAGAGGAATATGCCACTCAAAACTATTCTGAGAAATAATCACCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGAGGAATATGCCACTCAAAACTATTCTGAGAAATAATCACCTGTG  550

seq1  GGAATTCATAAAAAAATGTGGATGGATTAAGGTGTCAAATTTGTACTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCATAAAAAAATGTGGATGGATTAAGGTGTCAAATTTGTACTCAA  600

seq1  AGGAGCTTGGCTAATAACTGGCTTAATGGCAATGCTGTGAAGCAATAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTTGGCTAATAACTGGCTTAATGGCAATGCTGTGAAGCAATAAAG  650

seq1  AAACAGATAAAGAAATAGCTGATGGATTCTTCACTGTGTGATGTAAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATAAAGAAATAGCTGATGGATTCTTCACTGTGTGATGTAAAAGT  700

seq1  TCTTAGTTACCAT--GGGGGGGGGTGGTA  727
      |||||||||||||  ||||||||||||||
seq2  TCTTAGTTACCATGGGGGGGGGGGTGGTA  729


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