BAC Information

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BAC

Clone NameB6Ng01-190F04
Chromosome6 (Build37)
Map Location 133,522,156 - 133,523,244
singlet/doubletsinglet
Overlap genenone
Upstream genePrh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik, EG545884
Downstream geneEG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6, LOC100043660, Bcl2l14, Lrp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190F04.bB6Ng01-190F04.g
ACCGA014106GA014107
length1,1981,191
definitionB6Ng01-190F04.b B6Ng01-190F04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagagaactggaaaaaaaagacaatataatgaatcctgatgata
ttgggctataagcctagaacaatgcctacctccttcttcaacagagtttt
tccccatccgccgatgagagtagatacaaagaccaacgaccaaatattac
aagccattcaaagaggagacataggattttaggatactctggggtaaagg
acaccaggagatccaggcccccaggatcaacttagttagaatgattcata
gaggctcaaagacactgaaataacaatcatagagcctccatgagtattag
ctaggtcctcaacacaaaagttgaggttgtatagattagacttttcctga
gactcctaacagtgggaataggtgtgtttctgactcttctgtgtgctcat
gggactcttttcctcctactatattgcctagtcagccttaatttcagtgt
ctatgcctaaaattattgcattctgttgtgcttttcctcttgatatccct
tcaaggccttaattttactgaaggaaaacagaagagcagtaggactggaa
ggaattggagaagaggacatttagatgagggaaggaggtgagcctgtagt
ccagatggattatatgagacaaatataaagaaaacaaacagaaaaatatt
gaagattttccacagttacatagtaaccttaaggccagccagagcttcat
aaaaaccctatctcaaatgcaactaataaaagtcatatcattacaaaaat
aaatgttaacctatatcacacaggatatcagcagagactaaactgtagga
ataacttcagaaaattggtcaagagtttgttctcttttaaatgttttaac
tacaaaaaagagtgatgaaaagtctttgcaattaagagatttcaactaag
cttaatttctctcggtagactaaaattgagacttgtattacgatttgtgt
gacattataaagcattagtaattgagcagaaattaacttctgtagaggaa
aattagtttacaaaacatatggaatgatgtacacattattttaggtggct
atgggctatagttttggattatttatgagtttgttttgtttttttatttt
gatacgagagagcatttatgtatccactctagaactagagtatcactgtt
ggaacataaatgcatacggtcatctcaatactgctcttgggattacaa
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttgttcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
gattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaaa
taggattttgtccctgtgccctttagtgagtctagctaagggtttctcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgcagtctactcctcttgggtgaatttgcttcttttttttttttag
ggcttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttct
tcttggaggcactcagagctatgagtttccctcttagaaatgctttcatt
gtgttcccatagtttgggtacgtgtggctcattttcataaactctaaaaa
gtcttaatttctttctttttatttctctgacaggtatcatttgagagaga
gtgttattcaggttcacggcatgttgcttcatataagttgcaatgagata
cagcttaggccatcgtggtcctgaatggaagtacctgcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133522156_133523244
seq2: B6Ng01-190F04.b_172_1246

seq1  ATACAAAGACCAACGACCAAATATTACAAGCCATTCAAAGAGGAGACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGACCAACGACCAAATATTACAAGCCATTCAAAGAGGAGACATA  50

seq1  GGATTTTAGGATACTCTGGGGTAAAGGACACCAGGAGATCCAGGCCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTAGGATACTCTGGGGTAAAGGACACCAGGAGATCCAGGCCCCCA  100

seq1  GGATCAACTTAGTTAGAATGATTCATAGAGGCTCAAAGACACTGAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAACTTAGTTAGAATGATTCATAGAGGCTCAAAGACACTGAAATAA  150

seq1  CAATCATAGAGCCTCCATGAGTATTAGCTAGGTCCTCAACACAAAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATAGAGCCTCCATGAGTATTAGCTAGGTCCTCAACACAAAAGTTG  200

seq1  AGGTTGTATAGATTAGACTTTTCCTGAGACTCCTAACAGTGGGAATAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTATAGATTAGACTTTTCCTGAGACTCCTAACAGTGGGAATAGGT  250

seq1  GTGTTTCTGACTCTTCTGTGTGCTCATGGGACTCTTTTCCTCCTACTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTGACTCTTCTGTGTGCTCATGGGACTCTTTTCCTCCTACTATA  300

seq1  TTGCCTAGTCAGCCTTAATTTCAGTGTCTATGCCTAAAATTATTGCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGTCAGCCTTAATTTCAGTGTCTATGCCTAAAATTATTGCATTC  350

seq1  TGTTGTGCTTTTCCTCTTGATATCCCTTCAAGGCCTTAATTTTACTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGCTTTTCCTCTTGATATCCCTTCAAGGCCTTAATTTTACTGAAG  400

seq1  GAAAACAGAAGAGCAGTAGGACTGGAAGGAATTGGAGAAGGGGACATTTA  450
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAAACAGAAGAGCAGTAGGACTGGAAGGAATTGGAGAAGAGGACATTTA  450

seq1  GATGAGGGAAGGAGGTGAGCCTGTAGTCCAGATGGATTATATGAGACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGGAAGGAGGTGAGCCTGTAGTCCAGATGGATTATATGAGACAAA  500

seq1  TATAAAGAAAACAAACAGAAAAATATTGAAGATTTTCCACAGTTACATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGAAAACAAACAGAAAAATATTGAAGATTTTCCACAGTTACATAG  550

seq1  TAACCTTAAGGCCAGCCAGAGCTTCATAAAAACCCTATCTCAAATGCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTAAGGCCAGCCAGAGCTTCATAAAAACCCTATCTCAAATGCAAC  600

seq1  TAATAAAAGTCATATCATTACAAAAATAAATGTTAACCTATATCACACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAGTCATATCATTACAAAAATAAATGTTAACCTATATCACACAG  650

seq1  GATATCAGCAGAGACTAAACTGTAGGAATAACTTCAGAAAATTGGTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAGCAGAGACTAAACTGTAGGAATAACTTCAGAAAATTGGTCAAG  700

seq1  AGTTTGTTCTCTTTTAAATGTTTTAACTACAAAAAAGAGTGATGAAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTCTCTTTTAAATGTTTTAACTACAAAAAAGAGTGATGAAAAGT  750

seq1  CTTTGCAATTAAGAGATTTCAACTAAGCTTAATTTCTCTCGGTAGACTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAATTAAGAGATTTCAACTAAGCTTAATTTCTCTCGGTAGACTAA  800

seq1  AATTGAGACTTGTATTACGATTTGTGTGACATTATAAAGCATTAGTAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGACTTGTATTACGATTTGTGTGACATTATAAAGCATTAGTAATT  850

seq1  GAGCAGAAATTAACTTCTGTAGAGGAAAATTAGTTTACAAAACATATGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAAATTAACTTCTGTAGAGGAAAATTAGTTTACAAAACATATGGA  900

seq1  ATGATGTACACATTATTTTAGGTGGCTAATGGGCTATAGTTTTGGAATTA  950
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  ATGATGTACACATTATTTTAGGTGGCT-ATGGGCTATAGTTTTGG-ATTA  948

seq1  TTTAATGAGTTTGTTTTTGTTTTTTTATTTTGATACAGAGAGGAAGGCAT  1000
      ||| ||||||||| |||||||||||||||||||||| |||||    ||||
seq2  TTT-ATGAGTTTG-TTTTGTTTTTTTATTTTGATAC-GAGAG---AGCAT  992

seq1  TTATGTAT-CACTCTAAGACTAGAGTATCACTGTTGGGACATAAATATGC  1049
      |||||||| |||||||  ||||||||||||||||||| ||||||  ||||
seq2  TTATGTATCCACTCTAGAACTAGAGTATCACTGTTGGAACATAA--ATGC  1040

seq1  ATACAGTTCTATCTCCAATTACATGCTCTTGGAGTTACAA  1089
      |||| ||   |||||  | ||| |||||||||  ||||||
seq2  ATACGGT--CATCTC--AATAC-TGCTCTTGGGATTACAA  1075