BAC Information

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BAC

Clone NameB6Ng01-190G21
Chromosome6 (Build37)
Map Location 82,107,056 - 82,108,193
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042991, LOC232143, 1700009C05Rik, AW146020, Mrpl19, Tmem166
Downstream geneEG622198, Tacr1, Pole4, LOC100043412, Hk2, EG622318, Sema4f, D6Mm5e, Dok1, Loxl3, Htra2, Aup1, Dqx1, Tlx2, Pcgf1, Lbx2, A230058J24Rik, Mrpl53, Gcs1, Wbp1, Znhit4, Rtkn, Wdr54, 1700003E16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190G21.bB6Ng01-190G21.g
ACCGA014186GA014187
length6941,128
definitionB6Ng01-190G21.b B6Ng01-190G21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgttat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
aaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcactaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagaag
gaattcttcgtcagaaacacacagcacaggagagaagtttatgaaaggga
caagaaatgaaactgatttgaggctgaaaagaaatagctctcgccagggc
tccatataccacctgaatttttaaaagaaaaaaaaaaaaagagcctctcg
caagtcctgactaatctatgcaattataatattctacattctaaatgaaa
tttcacagccctccatccaaaagaaataagaattggtataatttcaatca
ccagaccctaaataacataaaatccaattcacagagtcggattattaccc
gaagaatcgataattttttttcaataaacaagtttaacaaaaagatttaa
tttactccccaagtttacgagggcaattttcacttgtttcctgccgttgt
caccatagtcatgtcatgttaactgtctgaataatatcactaaacacttc
ctaatgattgatctgtgtaataaaaaaaaaatcctgtatacaccattcct
tggaagaaattaaagagcctcgctggcattagtcaaagtcccatgatcgt
actgtgaaatttgcttggagcagttagttctgggtccctgtgtgaggctg
ccaagcaggacgggtttgccttgaatcatctcctccctcctttcccatcc
tgcaggcctcagtctctggctctccctgccagctcgggcccttctcattt
ttctcctctccttggctcctctgcctccttccctgatctccctctcatcc
agtatcacatttgtagtatgcttgttataatatgcctttctcttctgagc
acaacatcatcactgccttgacccagtagctataacaacagttagagcaa
aacaatccagaaggagctaggcttatgggttatggaaacagagctattga
ccctcctagtctaggaggaaggagaggtccctggaccctcacttggaatt
gcagccactacactctcttgcctatctcacccgctagctgcaaatgacag
taagaaaacagagtatataggagtaagtggataatgaaacttggggctgt
caccatgacgaagtgagacttgcagtgaggtctcccagctccttatgatg
atcttgctctacagttaaggtcactggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_82107056_82108193
seq2: B6Ng01-190G21.g_63_1190 (reverse)

seq1  ACCAGTGACTTTACTTGTAGAGCACAGATCATTCAT-AGGAGCCTGGGAG  49
      ||||||||| |||  ||||||||| |||||| |||| ||||| |||||||
seq2  ACCAGTGACCTTAACTGTAGAGCA-AGATCA-TCATAAGGAG-CTGGGAG  47

seq1  ACCTCACTGCCAAGTCTCACTTCGTCATGGTGGACAACCCCAAGGTTTTC  99
      ||||||||| ||||||||||||||||||||| |||| |||||||  ||||
seq2  ACCTCACTG-CAAGTCTCACTTCGTCATGGT-GACAGCCCCAAG--TTTC  93

seq1  ATTAACCACTTACTTCCTATATACTCTTGTTTTTCTTACTGTCATTTGCA  149
      |||| |||||||| |||||||||||||   ||||||||||||||||||||
seq2  ATTATCCACTTAC-TCCTATATACTCT--GTTTTCTTACTGTCATTTGCA  140

seq1  GCTAGCGGGTGGAGATAGGCAAGAGAGTGTAGTGGCTGCAATTCCAAGTG  199
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCGGGT-GAGATAGGCAAGAGAGTGTAGTGGCTGCAATTCCAAGTG  189

seq1  AGGGTCCAGGGACCTCTCCTTCCTCCTAGACTAGGGAGGGCCAATAGCTC  249
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  AGGGTCCAGGGACCTCTCCTTCCTCCTAGACTA-GGAGGGTCAATAGCTC  238

seq1  TGTTTCCATAA-CCATAAGCCTAGCTCCTTCTGGATTGTTTTGCTCTAAC  298
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCATAACCCATAAGCCTAGCTCCTTCTGGATTGTTTTGCTCTAAC  288

seq1  TGTTGTTATAGCTACTGGGTCAAGGCAGTGATGATGTTGTGCTCAGAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTATAGCTACTGGGTCAAGGCAGTGATGATGTTGTGCTCAGAAGA  338

seq1  GAAAGGCATATTATAACAAGCATACTACAAATGTGATACTGGATGAGAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCATATTATAACAAGCATACTACAAATGTGATACTGGATGAGAGG  388

seq1  GAGATCAGGGAAGGAGGCAGAGGAGCCAAGGAGAGGAGAAAAATGAGAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAGGGAAGGAGGCAGAGGAGCCAAGGAGAGGAGAAAAATGAGAAG  438

seq1  GGCCCGAGCTGGCAGGGAGAGCCAGAGACTGAGGCCTGCAGGATGGGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGAGCTGGCAGGGAGAGCCAGAGACTGAGGCCTGCAGGATGGGAAA  488

seq1  GGAGGGAGGAGATGATTCAAGGCAAACCCGTCCTGCTTGGCAGCCTCACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGAGATGATTCAAGGCAAACCCGTCCTGCTTGGCAGCCTCACA  538

seq1  CAGGGACCCAGAACTAACTGCTCCAAGCAAATTTCACAGTACGATCATGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACCCAGAACTAACTGCTCCAAGCAAATTTCACAGTACGATCATGG  588

seq1  GACTTTGACTAATGCCAGCGAGGCTCTTTAATTTCTTCCAAGGAATGGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGACTAATGCCAGCGAGGCTCTTTAATTTCTTCCAAGGAATGGTG  638

seq1  TATACAGGATTTTTTTTTTATTACACAGATCAATCATTAGGAAGTGTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGGATTTTTTTTTTATTACACAGATCAATCATTAGGAAGTGTTTA  688

seq1  GTGATATTATTCAGACAGTTAACATGACATGACTATGGTGACAACGGCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATTATTCAGACAGTTAACATGACATGACTATGGTGACAACGGCAG  738

seq1  GAAACAAGTGAAAATTGCCCTCGTAAACTTGGGGAGTAAATTAAATCTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAGTGAAAATTGCCCTCGTAAACTTGGGGAGTAAATTAAATCTTT  788

seq1  TTGTTAAACTTGTTTATTGAAAAAAAATTATCGATTCTTCGGGTAATAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAACTTGTTTATTGAAAAAAAATTATCGATTCTTCGGGTAATAAT  838

seq1  ACGACTCTGTGAATTGGATTTTATGTTATTTAGGGTCTGGTGATTGAAAT  898
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTCTGTGAATTGGATTTTATGTTATTTAGGGTCTGGTGATTGAAAT  888

seq1  TATACCAATGCTTATTTCTTTTGGATGGAGGGCTGTGAAATTTCATTTAG  948
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAATTCTTATTTCTTTTGGATGGAGGGCTGTGAAATTTCATTTAG  938

seq1  AATGTAGAATATTATAATTGCATAGATTAGTCAGGACTTGCGAGAGGCTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGAATATTATAATTGCATAGATTAGTCAGGACTTGCGAGAGGCTC  988

seq1  TTTTTTTTTTTTTCTTTTAAAAATTCAGGTGGTATATGGAGCCCTGGCGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTCTTTTAAAAATTCAGGTGGTATATGGAGCCCTGGCGA  1038

seq1  GAGCTATTTCTTTTCAGCCTCAAATCAGCTTCATTTCTTGTCCCTTTCAT  1098
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAGCTATTTCTTTTCAGCCTCAAATCAGTTTCATTTCTTGTCCCTTTCAT  1088

seq1  AAACTTCTCTCCTGTGCTGTGTGTTTCTGATGAAGAATTC  1138
      |||||||||||||||||||||||||||||| |||||||||
seq2  AAACTTCTCTCCTGTGCTGTGTGTTTCTGACGAAGAATTC  1128