BAC Information

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BAC

Clone NameB6Ng01-190I10
Chromosome6 (Build37)
Map Location 91,280,501 - 91,406,906
singlet/doubletdoublet
Overlap geneWnt7a, LOC100043659, LOC625420
Upstream geneUroc1, Zxdc, Ccdc37, Klf15, Aldh1l1, Slc41a3, Iqsec1, LOC100043646, EG665685, Nup210, Hdac11, Fbln2, LOC665716
Downstream geneChchd4, Tmem43, Xpc, Lsm3, Slc6a6, Grip2, C130022K22Rik, 4930590J08Rik, Fgd5, Nr2c2, Mrps25, Zfyve20, Trh, LOC665805, Prickle2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190I10.bB6Ng01-190I10.g
ACCGA014260GA014261
length1,127563
definitionB6Ng01-190I10.b B6Ng01-190I10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,405,791 - 91,406,906)(91,280,501 - 91,281,069)
sequence
gaattcctcccccaggagtagctagaacgtctcttgtgactcagacactg
cctggtcatctgcttcagtggcagacctgacttacaatgtctaccctagt
acatttttgtggatagaagatctttctgtccccccattgcacactggaga
agctctgggtaccgagtgtggggaacccatggacagtaccataaggctcc
ctgctgagccactatgcattgtggggtcagagctcctgtccctccttggt
gactgggaatccctgctgtggttttgttggacaggcccaggtgactgctt
gccatccaaagccatcggtggaatgtctgtgggattctttgccaaaaccc
caaggcaaaatccaaggtccaaggccattgccagcagcttcccagttccc
tttcccataggaacttttttgttgaaacctagctcccaacatgcttccaa
aggccatgttctgtctttcctggatcactacagtgaagtatgacagttgt
acagttttccaatctggccttggcttgctcgggtaaagctttgttatgta
ttttgtaaggcatagattctatattgtaatgtcctatgcaaaagaaaaaa
aaattaatgaaattgtaaattttattgctttgacatgtatgcatgtttag
tgatgtttacattttgaaagaaaatttatgattcatttaaaaaaattact
cagaacagggtcatgctgaccatataccctgttatgttctgtatgagggt
tttttaatcttaagaaattccacaaccataagcttcatgtaggatagggt
tagggctagacccagggttagggttaggtcaatatgagctgttatgtcag
aagtgaccactgggcagcactgatagcacctatgtataagcttattgtgg
gttttgtggttttagccctttaataagctggccctgggaaatgtccagtg
cacagctttcagctgttgccctggtaaatcagtctttaagtggtgtgttt
aattaaaccattcctgttgactgagatcagtgtttcgtggtggtttgttg
gggtgactcctgaaccaaacaagcctagacactgaaagatcctgaaccga
atgtagaagtcacagagctcttgaagt
ctaggtcgtctgtgttttcatatattcttggctttatgatgatcttagaa
gataatcttttgggacggtttttgttcacatatagtatactgctagtgtt
tatattcagcatgttgtcagtaatttttctcatttcttgtgttgagttta
gtaatgtatctgtaagcattttattttattttgttttgttttatttgtat
ccccagaggggattcaaccaagggttaaaattcctctgattctatgaatt
tgaaggcagggagaaggaagagggcgaaaggaaataccagttaagtaaga
tgcctgcccgcctgtgagataattctgcactctgatccccaggttctcgc
tgtggcctggaacaccctcttctgtgtctgctgaccttcatctgcagggt
ggagtttagtggctaccaaagcttgtcttcactgggcagaggtgggactg
tagagtgctaggcagcaggcatgctgcaagaccctcatttctcccagtaa
cagttgtgggggacacctactgcagtgagctgctatcatgcactgttgga
ggggggtgggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_91405791_91406906
seq2: B6Ng01-190I10.b_47_1170 (reverse)

seq1  ACTTCAAGGCTTCTGTGACCTTCTACATTCTG-TCAGGATCTTTCAGTGT  49
      ||||||||   ||||||| ||||||||||| | |||||||||||||||||
seq2  ACTTCAAGAGCTCTGTGA-CTTCTACATTCGGTTCAGGATCTTTCAGTGT  49

seq1  CTA-GCTTGTTTTGTTCAGGAGTCACCCC-ACAAACCA-CACG-AACACC  95
      ||| |||||||| |||||||||||||||| |||||||| |||| ||||| 
seq2  CTAGGCTTGTTTGGTTCAGGAGTCACCCCAACAAACCACCACGAAACACT  99

seq1  GATCTCAGTCAACAGGAATGGTTT-ATTAAACACA-CACTTAAAGACTGA  143
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  GATCTCAGTCAACAGGAATGGTTTAATTAAACACACCACTTAAAGACTGA  149

seq1  TTTACCAGGGCAACAGCTGAAAGCTGTGCACTGGACATTTCCCAGGGCCA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAGGGCAACAGCTGAAAGCTGTGCACTGGACATTTCCCAGGGCCA  199

seq1  GCTTAT--AAGGGCTAAAACCACAAAACCCACAATAAGCTTATACATAGG  241
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTAAAGGGCTAAAACCACAAAACCCACAATAAGCTTATACATAGG  249

seq1  TGCTATCAGTGCTGCCCAGTGGTCACTTCTGACATAACAGCTCATATTGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCAGTGCTGCCCAGTGGTCACTTCTGACATAACAGCTCATATTGA  299

seq1  CCTAACCCTAACCCTGGGTCTAGCCCTAACCCTATCCTACATGAAGCTTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACCCTAACCCTGGGTCTAGCCCTAACCCTATCCTACATGAAGCTTA  349

seq1  TGGTTGTGGAATTTCTTAAGATTAAAAAACCCTCATACAGAACATAACAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGGAATTTCTTAAGATTAAAAAACCCTCATACAGAACATAACAG  399

seq1  GGTATATGGTCAGCATGACCCTGTTCTGAGTAATTTTTTTAAATGAATCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATGGTCAGCATGACCCTGTTCTGAGTAATTTTTTTAAATGAATCA  449

seq1  TAAATTTTCTTTCAAAATGTAAACATCACTAAACATGCATACATGTCAAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTCTTTCAAAATGTAAACATCACTAAACATGCATACATGTCAAA  499

seq1  GCAATAAAATTTACAATTTCATTAATTTTTTTTTCTTTTGCATAGGACAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAAATTTACAATTTCATTAATTTTTTTTTCTTTTGCATAGGACAT  549

seq1  TACAATATAGAATCTATGCCTTACAAAATACATAACAAAGCTTTACCCGA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATAGAATCTATGCCTTACAAAATACATAACAAAGCTTTACCCGA  599

seq1  GCAAGCCAAGGCCAGATTGGAAAACTGTACAACTGTCATACTTCACTGTA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCAAGGCCAGATTGGAAAACTGTACAACTGTCATACTTCACTGTA  649

seq1  GTGATCCAGGAAAGACAGAACATGGCCTTTGGAAGCATGTTGGGAGCTAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCAGGAAAGACAGAACATGGCCTTTGGAAGCATGTTGGGAGCTAG  699

seq1  GTTTCAACAAAAAAGTTCCTATGGGAAAGGGAACTGGGAAGCTGCTGGCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAACAAAAAAGTTCCTATGGGAAAGGGAACTGGGAAGCTGCTGGCA  749

seq1  ATGGCCTTGGACCTTGGATTTTGCCTTGGGGTTTTGGCAAAGAATCCCAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTTGGACCTTGGATTTTGCCTTGGGGTTTTGGCAAAGAATCCCAC  799

seq1  AGACATTCCACCGATGGCTTTGGATGGCAAGCAGTCACCTGGGCCTGTCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTCCACCGATGGCTTTGGATGGCAAGCAGTCACCTGGGCCTGTCC  849

seq1  AACAAAACCACAGCAGGGATTCCCAGTCACCAAGGAGGGACAGGAGCTCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCACAGCAGGGATTCCCAGTCACCAAGGAGGGACAGGAGCTCT  899

seq1  GACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGTACTGTCCAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCACAATGCATAGTGGCTCAGCAGGGAGCCTTATGGTACTGTCCAT  949

seq1  GGGTTCCCCACACTCGGTACCCAGAGCTTCTCCAGTGTGCAATGGGGGGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCCCACACTCGGTACCCAGAGCTTCTCCAGTGTGCAATGGGGGGA  999

seq1  CAGAAAGATCTTCTATCCACAAAAATGTACTAGGGTAGACATTGTAAGTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGATCTTCTATCCACAAAAATGTACTAGGGTAGACATTGTAAGTC  1049

seq1  AGGTCTGCCACTGAAGCAGATGACCAGGCAGTGTCTGAGTCACAAGAGAC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGCCACTGAAGCAGATGACCAGGCAGTGTCTGAGTCACAAGAGAC  1099

seq1  GTTCTAGCTACTCCTGGGGGAGGAA  1116
      |||||||||||||||||||||||||
seq2  GTTCTAGCTACTCCTGGGGGAGGAA  1124

seq1: chr6_91280501_91281069
seq2: B6Ng01-190I10.g_68_636

seq1  GAATTCCTAGGTCGTCTGTGTTTTCATATATTCTTGGCTTTATGATGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGGTCGTCTGTGTTTTCATATATTCTTGGCTTTATGATGATC  50

seq1  TTAGAAGATAATCTTTTGGGACGGTTTTTGTTCACATATAGTATACTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGATAATCTTTTGGGACGGTTTTTGTTCACATATAGTATACTGCT  100

seq1  AGTGTTTATATTCAGCATGTTGTCAGTAATTTTTCTCATTTCTTGTGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTATATTCAGCATGTTGTCAGTAATTTTTCTCATTTCTTGTGTTG  150

seq1  AGTTTAGTAATGTATCTGTAAGCATTTTATTTTATTTTGTTTTGTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGTAATGTATCTGTAAGCATTTTATTTTATTTTGTTTTGTTTTAT  200

seq1  TTGTATCCCCAGAGGGGATTCAACCAAGGGTTAAAATTCCTCTGATTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCCCCAGAGGGGATTCAACCAAGGGTTAAAATTCCTCTGATTCTA  250

seq1  TGAATTTGAAGGCAGGGAGAAGGAAGAGGGCGAAAGGAAATACCAGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGAAGGCAGGGAGAAGGAAGAGGGCGAAAGGAAATACCAGTTAA  300

seq1  GTAAGATGCCTGCCCGCCTGTGAGATAATTCTGCACTCTGATCCCCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATGCCTGCCCGCCTGTGAGATAATTCTGCACTCTGATCCCCAGGT  350

seq1  TCTCGCTGTGGCCTGGAACACCCTCTTCTGTGTCTGCTGACCTTCATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGCTGTGGCCTGGAACACCCTCTTCTGTGTCTGCTGACCTTCATCTG  400

seq1  CAGGGTGGAGTTTAGTGGCTACCAAAGCTTGTCTTCACTGGGCAGAGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGGAGTTTAGTGGCTACCAAAGCTTGTCTTCACTGGGCAGAGGTG  450

seq1  GGACTGTAGAGTGCTAGGCAGCAGGCATGCTGCAAGACCCTCATTTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTAGAGTGCTAGGCAGCAGGCATGCTGCAAGACCCTCATTTCTCC  500

seq1  CAGTAACAGTTGTGGGGGACACCTACTGCAGTGAGCTGCTATCATGCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACAGTTGTGGGGGACACCTACTGCAGTGAGCTGCTATCATGCACT  550

seq1  GTTGGAGGGGGGTGGGTTT  569
      |||||||||||||||||||
seq2  GTTGGAGGGGGGTGGGTTT  569