BAC Information

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BAC

Clone NameB6Ng01-191C22
Chromosome6 (Build37)
Map Location 46,402,144 - 46,403,297
singlet/doubletsinglet
Overlap geneCntnap2
Upstream genenone
Downstream geneRbpsuh-rs3, LOC622745, LOC100041064, LOC100041078, A930035D04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191C22.bB6Ng01-191C22.g
ACCGA014744GA014745
length1,1631,186
definitionB6Ng01-191C22.b B6Ng01-191C22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactttaatgaaattttgctctctaattgtattttacacacaga
attagccctatcatcaaataacccttgatgtgtgctgtactctttgttca
tcaataacaaatcaaactttttaacaacaatatcgaaaaggcttgtgatc
ttgtcctctcccaaaggagctaaaactttggcagctatttgctaagcaca
tgaccctctgtgtttccctccccactcaaaagtagcctaaaacctgaatt
ctgtcttttctttttctttttttttttgtcttaattttttttatttgata
tgaatataagtggtacacagtcttttttttaattaggtattttcttcatt
tacatttccaatgctatcccaaaagtcgcccataccctcccccccactca
cctacccacccactcccacttcttggccctggcattcccctgtactgagg
catataaagtttgcaagaccaagaggcctctctttccaatgatggccgac
taagtcatcttctgatacatatgccttttcttaatgtatttttctatctt
actgttacatggaaatatactctttgagcagggcacttagatctttttct
taagcttcaaaagatatggatgatataatacataatacaatactatactg
caaagcctcactagtatatttgtgtgtgcctggaccacagatttgcagtc
tcccaataatgggcttttagactgtcagtttcttcatagtgtgaatactc
tttctgtgcatggaactctttaccaggtcatatacttagtaagaattgct
acataagaaaatatgtaactgctctgctttgggaaatagtaacaagatat
ctctttaaagatagagcagcagcagctcagagaggagggctgtcaaccaa
gtgccaactatgcaagcaagaggacctgagttcaaacaccagcacccata
taaaaaaaagcagatgggtttatcaccctgtgaattgtagttcttcagta
tcagagctcagatataggttgattcttaaagtccatggctagtcagtcta
tcaaatggagagagacaagataccagtgagattacttgctttaggaaaaa
aaaacaagccagcctgatctgaggattgacacagaagcttcacatggtta
tagccatttctgc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggaccttgagggcatcatcctgagtgaggtaacacattacaaaa
aaactcacacaatatgtattcactgataagtggatattagccccaaacct
aggatacccaagatataagatataatttgttaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagatttgggaac
aaaacacccatggaaggagttacagagccaaagtttggagctgagatgaa
aaggatggaccatgtagagactgccatatccaggggatccaccccaaaat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggcaggagctagagaagtagccaggagctaaagggatctgcaacctc
taatagtggacatcattatgactaccagtaccctcgagctcttgactcta
gctgcataattaatcaaagaatggcttagttcggcaatcactgaaggaga
gttcatgaacttggcaaacttatatgtccagtcaggtacctaggttcaat
agggaagtgacttggctgagcggaatgctgccgcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_46402144_46403297
seq2: B6Ng01-191C22.b_41_1203

seq1  GAATTCAACTTTAATGAAATTTTGCTCTCTAATTGTATTTTACACACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTAATGAAATTTTGCTCTCTAATTGTATTTTACACACAGA  50

seq1  ATTAGCCCTATCATCAAATAACCCTTGATGTGTGCTGTACTCTTTGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCCTATCATCAAATAACCCTTGATGTGTGCTGTACTCTTTGTTCA  100

seq1  TCAATAACAAATCAAACTTTTTAACAACAATATCGAAAAGGCTTGTGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAACAAATCAAACTTTTTAACAACAATATCGAAAAGGCTTGTGATC  150

seq1  TTGTCCTCTCCCAAAGGAGCTAAAACTTTGGCAGCTATTTGCTAAGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCTCCCAAAGGAGCTAAAACTTTGGCAGCTATTTGCTAAGCACA  200

seq1  TGACCCTCTGTGTTTCCCTCCCCACTCAAAAGTAGCCTAAAACCTGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTCTGTGTTTCCCTCCCCACTCAAAAGTAGCCTAAAACCTGAATT  250

seq1  CTGTCTTTTCTTTTTCTTTTTTTTTTTGTCTTAATTTTTTTTATTTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTTCTTTTTCTTTTTTTTTTTGTCTTAATTTTTTTTATTTGATA  300

seq1  TGAATATAAGTGGTACACAGTCTTTTTTTTAATTAGGTATTTTCTTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATAAGTGGTACACAGTCTTTTTTTTAATTAGGTATTTTCTTCATT  350

seq1  TACATTTCCAATGCTATCCCAAAAGTCGCCCATACCCTCCCCCCCACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCCAATGCTATCCCAAAAGTCGCCCATACCCTCCCCCCCACTCA  400

seq1  CCTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGG  450

seq1  CATATAAAGTTTGCAAGACCAAGAGGCCTCTCTTTCCAATGATGGCCGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAGTTTGCAAGACCAAGAGGCCTCTCTTTCCAATGATGGCCGAC  500

seq1  TAAGTCATCTTCTGATACATATGCCTTTTCTTAATGTATTTTTCTATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCATCTTCTGATACATATGCCTTTTCTTAATGTATTTTTCTATCTT  550

seq1  ACTGTTACATGGAAATATACTCTTTGAGCAGGGCACTTAGATCTTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTACATGGAAATATACTCTTTGAGCAGGGCACTTAGATCTTTTTCT  600

seq1  TAAGCTTCAAAAGATATGGATGATATAATACATAATACAATACTATACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTCAAAAGATATGGATGATATAATACATAATACAATACTATACTG  650

seq1  CAAAGCCTCACTAGTATATTTGTGTGTGCCTGGACCACAGATTTGCAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCTCACTAGTATATTTGTGTGTGCCTGGACCACAGATTTGCAGTC  700

seq1  TCCCAATAATGGGCTTTTAGACTGTCAGTTTCTTCATAGTGTGAATACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATAATGGGCTTTTAGACTGTCAGTTTCTTCATAGTGTGAATACTC  750

seq1  TTTCTGTGCATGGAACTCTTTACCAGGTCATATACTTAGTAAGAATTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGCATGGAACTCTTTACCAGGTCATATACTTAGTAAGAATTGCT  800

seq1  ACATAAGAAAATATGTAACTGCTCTGCTTTGGGAAATAGTAACAAGATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGAAAATATGTAACTGCTCTGCTTTGGGAAATAGTAACAAGATAT  850

seq1  CTC-TTAAAGATAGAGCAGCAGCAGCTCAGAGAGGAGGGCTGTCAACCAA  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAAAGATAGAGCAGCAGCAGCTCAGAGAGGAGGGCTGTCAACCAA  900

seq1  GTGCCAACTATGCAAGCAAGAGGACCTGAGTTCAAACACCAGCACCCATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAACTATGCAAGCAAGAGGACCTGAGTTCAAACACCAGCACCCATA  950

seq1  TAAAAAAAAGCAGAT-GGTTTATCACCCTGTG-ATTGTAGT--CTCAGTA  995
      ||||||||||||||| |||||||||||||||| ||||||||   ||||||
seq2  TAAAAAAAAGCAGATGGGTTTATCACCCTGTGAATTGTAGTTCTTCAGTA  1000

seq1  TCAAGAGCTCAGATATAGGTTGATTCCTAAAGTCCATTGGCTAGTCAGTC  1045
      || ||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  TC-AGAGCTCAGATATAGGTTGATTCTTAAAGTCCA-TGGCTAGTCAGTC  1048

seq1  TATCCAAATGAGAGAGACAAGATACCAGTGAGA-TACTTGCTTAAG--AA  1092
      |||| ||  |||||||||||||||||||||||| ||||||||| ||  ||
seq2  TATCAAATGGAGAGAGACAAGATACCAGTGAGATTACTTGCTTTAGGAAA  1098

seq1  AAAAAACAAG-CAG-CTGAGTCTGAGGAATGACACAGGAGC-TCACATGG  1139
      |||||||||| ||| |||| |||||||| |||||||| ||| ||||||||
seq2  AAAAAACAAGCCAGCCTGA-TCTGAGGATTGACACAGAAGCTTCACATGG  1147

seq1  TTATAG-CATTTCTGC  1154
      |||||| |||||||||
seq2  TTATAGCCATTTCTGC  1163