BAC Information

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BAC

Clone NameB6Ng01-191H22
Chromosome6 (Build37)
Map Location 41,533,024 - 41,693,028
singlet/doubletdoublet
Overlap geneEphb6, Trpv6, Trpv5, 1700034O15Rik, Kel
Upstream geneClec5a, Tas2r138, Mgam, EG638904, Moxd2, LOC621968, BC048599, 1700074P13Rik, LOC194360, 1810009J06Rik, LOC100040208, 2210010C04Rik, LOC100039790, Tcrb-V8.2, LOC100040359, LOC100040333, Try4, 1810049H19Rik, Try10, Prss3, EG436523, EG386551, LOC100040233, Prss1, Prss2, Tcrb-V13
Downstream geneOlfr459, Pip, Sval2, Sval1, Sval3, Sva, Tas2r139, Tas2r144, Gstk1, Tmem139, Casp2, Clcn1, 6330503C03Rik, Zyx, Epha1, Tas2r143, Tas2r135, Tas2r126, Olfr458, Olfr457, Olfr456, LOC232745, EG546896, Eapa2, BC011487, 3321401G04Rik, LOC100039918, GA_x5J8B7W6337-801345-802245
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191H22.bB6Ng01-191H22.g
ACCGA014971GA014972
length1,1611,076
definitionB6Ng01-191H22.b B6Ng01-191H22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,691,888 - 41,693,028)(41,533,024 - 41,534,098)
sequence
gaattcagtaccgtataagagactagcaaagaaaatgacagggggtggat
acatccaaaaaaattcaatactaaaagtgtaaaatttaatatgaagctcc
acagcttcggttctgaatgcctatttaaactatataaaattcacagagtt
gtatagatttaaggtctagtgaatttgggtgtgtggtggttttatttatt
tgcaaatacattttataataaaataccaatattaaaaaactgaaaagaaa
taaaggagagacactttcagacatagaacaattagtataaaatgtcagaa
aagaaaaaatggataattcatatttcctatttaattataaacataaatga
atacattttcatgattttcattgtagaattgaattaaataaagtcatctt
caaccattttaggagaacatgtaattcaatctaggtatgaaagggtacac
ctgtcagtgaaacagtatctgccaatggaagttaactaactagagtataa
tttacctttaaatattatttctttaatacaatttcacaaaagtcagccat
taggcctagtatactgtccttaaagtacatactcgagagagtgagatcac
ctgttcaatacttgcctgggttacacagtgagttctaatccagcctaggt
catttagtaaggtcctgtctcaaaagtaaataataataataataatttta
aaataattttaaaagccacctaaagtagtcttgttttatatttaggacca
aaacaaaataatgaaggcctaaatttaaataaacaaatagaatataggaa
tacaaagaaaaaaataaatgatatttcaaagtaatagatgtaagtctcta
aaattattaaacatgataggtactgcctaaatgatgtgatatcataagtt
acaataaaaaatacacttcttctaatgcattctattcattgtaatatcta
ggccactaacaaaaatcttgttacatagaacataagcaggtaccaataag
aagtcctatttacagatgtcccaagctcacaggaactatatgaagaagcc
tttccagcttggatttggaatctaatcactgttggacttggaccacaccc
atttcggctcccaagggtcctcatccaaagcattccctggaaagaacatg
gggatgactta
gaattcagtttatgcagtcagtgcagtaagtgcatgtagttcagttcata
gaattcagaggtactttttctgagcatagtgattcagtgagaagccaaga
gaaaccagtttgactcagtcaacttggaaaggagttttgaatcagaacag
ctaaggtgaaccaggcagagttcagaaagaactagaaagagggagattat
tcagaaataagcctctgagatgacaactgcatctggtcaataaaagttac
cttttcaatgatgagtattaaaatgtccaaaatttacaaaaggtctgttg
tttgatgaaagaagaaaacttcaaagaaagcttcctggagagtaaaaaat
aaataaataaataaataaaaatcggagtttagatcttgggaatacttcta
tagagaagaagacaatttaaaaagtggtctacaaagtgagttccaggaca
gccagggctatacagagaaaccctgtctcgaaaaaaaacaaaaaacaaaa
aacaaaacaaacaaacaaacaaaaaggtgatagcatcttgaaggtttttg
gtggctagttaaagattcctctacacacacctgactgacatcatcatagg
tctagctataattcatgttttttcttccttggtagttttgtttttccttt
cctagaaaaagtccatctatctctcatggtctagtcaagttcaaataaaa
ggttgctatgtgatctgtatgactgtatctagattttcctgattcatcca
gttgaggaagaggaattctccagcatcaaggaatagtaatccatgtatct
aattaattatatagtcctccatgctttattgttgtttgtttgtgttgttt
gcaacaggctctcatgtagtctaaggtgactttaactctttcccacatac
tgggaatatatatttataccaccttgcccactgtatgcctttttatacat
ccacaccaatcgtaattgcaattccttaactctctctcagtgtacatatg
ttgtcttcctccatgcccacaactatattgaacacttaggatgctgcctc
attgggaggtgggtcaagaagcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_41691888_41693028
seq2: B6Ng01-191H22.b_45_1205 (reverse)

seq1  TAAGTCATCCC--TTGTCTTTCCAGGAATTGCTTGTGGGTTGAGACCCTT  48
      |||||||||||  |  |||||||||| | ||||| ||| |   |||||||
seq2  TAAGTCATCCCCATGTTCTTTCCAGGGAATGCTT-TGGATGAGGACCCTT  49

seq1  GGGAGCAG-AATGGGTGTGGTCCAGTTCCAACAGTGA-TGGATTCCAAAA  96
      |||||| | |||||||||||||||  ||||||||||| | ||||||||| 
seq2  GGGAGCCGAAATGGGTGTGGTCCAAGTCCAACAGTGATTAGATTCCAAAT  99

seq1  CC-AGCTGG-AAGGCTTC-TCAATTAGTT-CTGTGAACTT-GGACATCTG  141
      || |||||| |||||||| |||  ||||| |||||| ||| |||||||||
seq2  CCAAGCTGGAAAGGCTTCTTCATATAGTTCCTGTGAGCTTGGGACATCTG  149

seq1  T-AATA-GACTTCTTA-TGGTACCTGCTTATG-TCTATTGTAACAAGATT  187
      | |||| ||||||||| ||||||||||||||| |||| ||||||||||||
seq2  TAAATAGGACTTCTTATTGGTACCTGCTTATGTTCTA-TGTAACAAGATT  198

seq1  TTTGTTAGTG--CTAGATATTACAATG-ATAGAATGCA-TAG-AGAAGTG  232
      ||||||||||  ||||||||||||||| |||||||||| ||| |||||||
seq2  TTTGTTAGTGGCCTAGATATTACAATGAATAGAATGCATTAGAAGAAGTG  248

seq1  TATTTTTTATTGT-ACTTATGATATCACATCA-TTAGGCAGTACCTATCA  280
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  TATTTTTTATTGTAACTTATGATATCACATCATTTAGGCAGTACCTATCA  298

seq1  TGTTTAATAA-TTTAGAGACTTACATCTATTACTTTG-AATATCATTTAT  328
      |||||||||| |||||||||||||||||||||||||| ||||||||||||
seq2  TGTTTAATAATTTTAGAGACTTACATCTATTACTTTGAAATATCATTTAT  348

seq1  TTTTTTCTTTGTATTTCTATATTCTATTTGTTTATTTAAATTTAGGCCTT  378
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTGTATTCCTATATTCTATTTGTTTATTTAAATTTAGGCCTT  398

seq1  CATTATTTTGTTTTGGTCCTAAATATAAAACAAGACTACTTTAGGTGGCT  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTGTTTTGGTCCTAAATATAAAACAAGACTACTTTAGGTGGCT  448

seq1  TTTAAAATTATTTTAAAATTATTATTATTATTATTTACTTTTGAGACAGG  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTATTTTAAAATTATTATTATTATTATTTACTTTTGAGACAGG  498

seq1  ACCTTACTAAATGACCTAGGCTGGATTAGAACTCACTGTGTAACCCAGGC  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACTAAATGACCTAGGCTGGATTAGAACTCACTGTGTAACCCAGGC  548

seq1  AAGTATTGAACAGGTGATCTCACTCTCTCGAGTATGTACTTTAAGGACAG  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTGAACAGGTGATCTCACTCTCTCGAGTATGTACTTTAAGGACAG  598

seq1  TATACTAGGCCTAATGGCTGACTTTTGTGAAATTGTATTAAAGAAATAAT  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAGGCCTAATGGCTGACTTTTGTGAAATTGTATTAAAGAAATAAT  648

seq1  ATTTAAAGGTAAATTATACTCTAGTTAGTTAACTTCCATTGGCAGATACT  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGTAAATTATACTCTAGTTAGTTAACTTCCATTGGCAGATACT  698

seq1  GTTTCACTGACAGGTGTACCCTTTCATACCTAGATTGAATTACATGTTCT  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACTGACAGGTGTACCCTTTCATACCTAGATTGAATTACATGTTCT  748

seq1  CCTAAAATGGTTGAAGATGACTTTATTTAATTCAATTCTACAATGAAAAT  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATGGTTGAAGATGACTTTATTTAATTCAATTCTACAATGAAAAT  798

seq1  CATGAAAATGTATTCATTTATGTTTATAATTAAATAGGAAATATGAATTA  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAATGTATTCATTTATGTTTATAATTAAATAGGAAATATGAATTA  848

seq1  TCCATTTTTTCTTTTCTGACATTTTATACTAATTGTTCTATGTCTGAAAG  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTTTCTTTTCTGACATTTTATACTAATTGTTCTATGTCTGAAAG  898

seq1  TGTCTCTCCTTTATTTCTTTTCAGTTTTTTAATATTGGTATTTTATTATA  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCCTTTATTTCTTTTCAGTTTTTTAATATTGGTATTTTATTATA  948

seq1  AAATGTATTTGCAAATAAATAAAACCACCACACACCCAAATTCACTAGAC  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATTTGCAAATAAATAAAACCACCACACACCCAAATTCACTAGAC  998

seq1  CTTAAATCTATACAACTCTGTGAATTTTATATAGTTTAAATAGGCATTCA  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATCTATACAACTCTGTGAATTTTATATAGTTTAAATAGGCATTCA  1048

seq1  GAACCGAAGCTGTGGAGCTTCATATTAAATTTTACACTTTTAGTATTGAA  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCGAAGCTGTGGAGCTTCATATTAAATTTTACACTTTTAGTATTGAA  1098

seq1  TTTTTTTGGATGTATCCACCACCTGTCATTTTCTTTGCTAGTCTCTTATA  1128
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTTTTTGGATGTATCCACCCCCTGTCATTTTCTTTGCTAGTCTCTTATA  1148

seq1  CGGTACTGAATTC  1141
      |||||||||||||
seq2  CGGTACTGAATTC  1161

seq1: chr6_41533024_41534098
seq2: B6Ng01-191H22.g_66_1141

seq1  GAATTCAGTTTATGCAGTCAGTGCAGTAAGTGCATGTAGTTCAGTTCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTATGCAGTCAGTGCAGTAAGTGCATGTAGTTCAGTTCATA  50

seq1  GAATTCAGAGGTACTTTTTCTGAGCATAGTGATTCAGTGAGAAGCCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGTACTTTTTCTGAGCATAGTGATTCAGTGAGAAGCCAAGA  100

seq1  GAAACCAGTTTGACTCAGTCAACTTGGAAAGGAGTTTTGAATCAGAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAGTTTGACTCAGTCAACTTGGAAAGGAGTTTTGAATCAGAACAG  150

seq1  CTAAGGTGAACCAGGCAGAGTTCAGAAAGAACTAGAAAGAGGGAGATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTGAACCAGGCAGAGTTCAGAAAGAACTAGAAAGAGGGAGATTAT  200

seq1  TCAGAAATAAGCCTCTGAGATGACAACTGCATCTGGTCAATAAAAGTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATAAGCCTCTGAGATGACAACTGCATCTGGTCAATAAAAGTTAC  250

seq1  CTTTTCAATGATGAGTATTAAAATGTCCAAAATTTACAAAAGGTCTGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAATGATGAGTATTAAAATGTCCAAAATTTACAAAAGGTCTGTTG  300

seq1  TTTGATGAAAGAAGAAAACTTCAAAGAAAGCTTCCTGGAGAGTAAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGAAAGAAGAAAACTTCAAAGAAAGCTTCCTGGAGAGTAAAAAAT  350

seq1  AAATAAATAAATAAATAAAAATCGGAGTTTAGATCTTGGGAATACTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATAAATAAAAATCGGAGTTTAGATCTTGGGAATACTTCTA  400

seq1  TAGAGAAGAAGACAATTTAAAAAGTGGTCTACAAAGTGAGTTCCAGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGAAGACAATTTAAAAAGTGGTCTACAAAGTGAGTTCCAGGACA  450

seq1  GCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAAAACAAAAAACAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAAAACAAAAAACAAAA  500

seq1  AACAAAACAAACAAACAAACAAAAAGGTGATAGCATCTTGAAGGTTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAACAAACAAACAAAAAGGTGATAGCATCTTGAAGGTTTTTG  550

seq1  GTGGCTAGTTAAAGATTCCTCTACACACACCTGACTGACATCATCATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTAGTTAAAGATTCCTCTACACACACCTGACTGACATCATCATAGG  600

seq1  TCTAGCTATAATTCATGTTTTTTCTTCCTTGGTAGTTTTGTTTTTCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTATAATTCATGTTTTTTCTTCCTTGGTAGTTTTGTTTTTCCTTT  650

seq1  CCTAGAAAAAGTCCATCTATCTCTCATGGTCTAGTCAAGTTCAAATAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAAAAGTCCATCTATCTCTCATGGTCTAGTCAAGTTCAAATAAAA  700

seq1  GGTTGCTATGTGATCTGTATGACTGTATCTAGATTTTCCTGATTCATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTATGTGATCTGTATGACTGTATCTAGATTTTCCTGATTCATCCA  750

seq1  GTTGAGGAAGAGGAATTCTCCAGCATCAAGGAATAGTAATCCATGTATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGAAGAGGAATTCTCCAGCATCAAGGAATAGTAATCCATGTATCT  800

seq1  AATTAATTATATAGTCCTCCATGCTTTATTGTTGTTTGTTTGTGTTGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTATATAGTCCTCCATGCTTTATTGTTGTTTGTTTGTGTTGTTT  850

seq1  GCAACAGGCTCTCATGTAGTCTAAGGTGACTTTAAACTCTTTCCCACATA  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCAACAGGCTCTCATGTAGTCTAAGGTGACTTT-AACTCTTTCCCACATA  899

seq1  CTGGGAATATATATTTATACCACC-TGCCCACTGTATGCCTTTTTATACA  949
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  CTGGGAATATATATTTATACCACCTTGCCCACTGTATGCCTTTTTATAC-  948

seq1  ATCCACACCAATCGTAATTGCAATTCCTTAACTCTCTCTCAGTGTACATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACACCAATCGTAATTGCAATTCCTTAACTCTCTCTCAGTGTACATA  998

seq1  TG-TGTCTT-CTCCATGCCCACAACTATATTGAACAC-TAAGATGCTGCC  1046
      || |||||| ||||||||||||||||||||||||||| || |||||||||
seq2  TGTTGTCTTCCTCCATGCCCACAACTATATTGAACACTTAGGATGCTGCC  1048

seq1  TCATTGGGAAGGTGGGTCCAAGAGCAGTG  1075
      |||||||| ||||||||| |  |||||||
seq2  TCATTGGG-AGGTGGGTCAAGAAGCAGTG  1076