BAC Information

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BAC

Clone NameB6Ng01-192A16
Chromosome6 (Build37)
Map Location 47,439,920 - 47,440,988
singlet/doubletsinglet
Overlap geneCul1
Upstream geneCntnap2, Rbpsuh-rs3, LOC622745, LOC100041064, LOC100041078, A930035D04Rik
Downstream geneEzh2, Rn4.5s, EG384379, Pdia4, LOC100041154, Zfp786, Zfp398, Zfp282, Zfp212, A230106D06Rik, AI894139, LOC623601, Zfp777, Zfp746, LOC665990, Krba1, Zfp467, Sspo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192A16.bB6Ng01-192A16.g
ACCGA015383GA015384
length1,071489
definitionB6Ng01-192A16.b B6Ng01-192A16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttattctgtagataatttattgctattttgatatctgaaaag
ttttagctttgggcccttgttttcaccttgagtgtcatgtgtgtgtgtgt
gtattcacaatagtcacaatggagtacttttttatagaaaactatgaagt
cttttctaggtagtgagtaaataatacttattacataatgtaatcttggt
tctcttcttagggttatttcatataatgccctatactgggctgaagaaat
ttttagttttaaaaaatcctaatgtaaagaatttaaaaagcattcaaagt
ttattttccaacaaagaacatcagcaggcactgggcttataaaagtgctt
atccatagaacatattcccagaaggagccactgctctgtacttggctgct
tcaggttgaacagatactgttgtgtacactttccattctagaagaaagag
ggtagcttagcaaagagttgtttttaatactagagtcaggtggaacaatc
aagaagcttgagtaacatccacatttcaagaaagtcctttgatagagagg
agaaagatccctcactcatgagttgggcctttcttcatgagaccctcagc
aacatttcattgtctacttaatactacatgtacaaaaggtaattaaaata
aaggaatcaaaagaacatcttgactatctgctgtttctgtcagcccagca
actcttaggtttcagactggcctggggcttggtagagtgcttgcttgtct
aggtgcacacacttctgattttgaggtgcacacgctgctttttttgaggc
agggtttttctgtgtagccctggctgtcctggaactcactgttgtttttg
tttttttaaaaaaaacagttgtcttcctttctttgtatgttttcagtata
aacatgcactttaaagatatatatatatatatatatatatatatatatat
atatatatatatttgggtatcagtatactccacagaaattactgacatgt
aaatgattaattgagtggttcagtttgttagttcttattagtatatgtat
ggctagagttctactttcttt
tcacttgaggaataccgaatggctgagaagcacctgataaaatgttcagc
atccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacc
tcacaccagtcagaatggctaagatcaaaaattcaggtgacagcagatgc
tggcgaggatgtggagaaagaggaacactcctccattgttggtgggattg
caagcttgtacaaccactctggaaatcagtctggccgttcctcagaaaat
tggacatagtactacaggaggatcccacaatacctctcctgggcatatat
ccagaagatgttccaaccggtaagaaggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgcccct
caacagaggaatggatacataaaatgtggtacatttacacaatggagtac
tactcagctattaaaaagaatgaatttatgaaattccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_47439920_47440988
seq2: B6Ng01-192A16.b_48_1118

seq1  GAATTCTCTTATTCTGTAGATAATTTATTGCTATTTTGATATCTGAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTATTCTGTAGATAATTTATTGCTATTTTGATATCTGAAAAG  50

seq1  TTTTAGCTTTGGGCCCTTGTTTTCACCTTGAGTGTCATGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCTTTGGGCCCTTGTTTTCACCTTGAGTGTCATGTGTGTGTGTGT  100

seq1  GTATTCACAATAGTCACAATGGAGTACTTTTTTATAGAAAACTATGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCACAATAGTCACAATGGAGTACTTTTTTATAGAAAACTATGAAGT  150

seq1  CTTTTCTAGGTAGTGAGTAAATAATACTTATTACATAATGTAATCTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTAGGTAGTGAGTAAATAATACTTATTACATAATGTAATCTTGGT  200

seq1  TCTCTTCTTAGGGTTATTTCATATAATGCCCTATACTGGGCTGAAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTTAGGGTTATTTCATATAATGCCCTATACTGGGCTGAAGAAAT  250

seq1  TTTTAGTTTTAAAAAATCCTAATGTAAAGAATTTAAAAAGCATTCAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTTAAAAAATCCTAATGTAAAGAATTTAAAAAGCATTCAAAGT  300

seq1  TTATTTTCCAACAAAGAACATCAGCAGGCACTGGGCTTATAAAAGTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCAACAAAGAACATCAGCAGGCACTGGGCTTATAAAAGTGCTT  350

seq1  ATCCATAGAACATATTCCCAGAAGGAGCCACTGCTCTGTACTTGGCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATAGAACATATTCCCAGAAGGAGCCACTGCTCTGTACTTGGCTGCT  400

seq1  TCAGGTTGAACAGATACTGTTGTGTACACTTTCCATTCTAGAAGAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTGAACAGATACTGTTGTGTACACTTTCCATTCTAGAAGAAAGAG  450

seq1  GGTAGCTTAGCAAAGAGTTGTTTTTAATACTAGAGTCAGGTGGAACAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTTAGCAAAGAGTTGTTTTTAATACTAGAGTCAGGTGGAACAATC  500

seq1  AAGAAGCTTGAGTAACATCCACATTTCAAGAAAGTCCTTTGATAGAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTTGAGTAACATCCACATTTCAAGAAAGTCCTTTGATAGAGAGG  550

seq1  AGAAAGATCCCTCACTCATGAGTTGGGCCTTTCTTCATGAGACCCTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATCCCTCACTCATGAGTTGGGCCTTTCTTCATGAGACCCTCAGC  600

seq1  AACATTTCATTGTCTACTTAATACTACATGTACAAAAGGTAATTAAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCATTGTCTACTTAATACTACATGTACAAAAGGTAATTAAAATA  650

seq1  AAGGAATCAAAAGAACATCTTGACTATCTGCTGTTTCTGTCAGCCCAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCAAAAGAACATCTTGACTATCTGCTGTTTCTGTCAGCCCAGCA  700

seq1  ACTCTTAGGTTTCAGACTGGCCTGGGGCTTGGTAGAGTGCTTGCTTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGGTTTCAGACTGGCCTGGGGCTTGGTAGAGTGCTTGCTTGTCT  750

seq1  AGGTGCACACACTTCTGATTTTGAGGTGCACACGCTGCTTTTTTTGAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCACACACTTCTGATTTTGAGGTGCACACGCTGCTTTTTTTGAGGC  800

seq1  AGGGTTTTTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTGTTGTTTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTGTTGTTTTTG  850

seq1  TTTTTTTAAAAAAAACAGTTGTCTTCCTTTCTTTGTATGTTTTCAGTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAAAAAACAGTTGTCTTCCTTTCTTTGTATGTTTTCAGTATA  900

seq1  AACATGCAC-TTAAAGATATATATATATATATATATATATATATATATAT  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCACTTTAAAGATATATATATATATATATATATATATATATATAT  950

seq1  ATATATATATATTT-GGTATCAGTATACTCCACAGAAATTACTGACATGT  998
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATATATATATATTTGGGTATCAGTATACTCCACAGAAATTACTGACATGT  1000

seq1  AAATGATTAATTGAGTGGTTCAGTTTGTTTGTTCTTTATTAGTATATGTA  1048
      ||||||||||||||||||||||||||||| |||| |||||||||||||||
seq2  AAATGATTAATTGAGTGGTTCAGTTTGTTAGTTC-TTATTAGTATATGTA  1049

seq1  TGG-TATATTTCTACTTTCTTT  1069
      ||| || | |||||||||||||
seq2  TGGCTAGAGTTCTACTTTCTTT  1071