BAC Information

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BAC

Clone NameB6Ng01-192E13
Chromosome6 (Build37)
Map Location 126,329,266 - 126,330,338
singlet/doubletsinglet
Overlap genenone
Upstream genePlekhg6, Cd9, Vwf, Tmem16b, Ntf3, LOC100043565, LOC667427
Downstream geneLOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2, Tpi-rs11, EG243642, LOC100043578, EG640703
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192E13.bB6Ng01-192E13.g
ACCGA015561GA015562
length1,2381,098
definitionB6Ng01-192E13.b B6Ng01-192E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaatacttttatcatgaatgggtgttggattttg
tcaaatgctttctcagcatctaacgacatgatcatgtggtttttgtcttt
gagtttgtttatatactggattacgttgatggatttccatatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatggatgcttgtt
ttgatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttttgtggtttaggtattagagtaattgtggcttcatagaatgagttg
ggtagagtaccttccgtttctattttgtggaatagtttgtgaagaactgg
aattaggtcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttgtttgggagactattaattgctgcttctatttct
ttaggggatataggactgtttagatcattaacctgatcttgatttagctt
tggtatctggtatctgtctagaaacttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaagatctgttgttatgtctcccttttcatttctgattttgttaat
taggatgctttccctgtgccctttagtgagtctggctaagggtttaatct
atcttgttgattttctcaaagaaccggctccttgattggttgattctttg
aatagttcttcttgtttccacttggttgatttcacccctgagttttatta
tttcctgccttctgctcctcttgggtgaatttgcttccttttgttctaga
gcttttaagtgtgttgtcaaactgctaatgtgtgctctctctagtttctt
tttggaggcactcagagctatgagtttcctcttagaaatgctttcaattg
tgtcccataagtttgggtatgttgtgacttcgttttcattaactcaaaag
gtccttaattctttcttatccctccctgaccaagtcattggagaagaaat
gtgtccagttcacactgaatgttggccttcataatatacttgctatgaga
tcgagctagtccctatggaatctgtaagagtccatgcacattctaattgg
tatgttgaagcttgcgttttgttgaagcacttcacatg
gaattcagttgtttccctccaaaactatgttgtgactctataatttttcg
tgatgttttggctataatttttgtgaagccatgatttcattttgatgata
ttgtggtaatatatttgatggtattacaactatatttttgatgaatgtta
tagctatatttttgatgatgttttggctatattttgggtgatctttcttc
tgttcctggtgtctgcctttaaatggctggttaagcctccctctatactt
tgtcaaggtgttcagaccctgagtagccaagccaccaatactccatatct
tttgttgccttccctgactctcctccttttctttcttccttttccttcct
tttctgtctcttcccttgtttctcctatcagcccaataggtttgtcttgg
tgtttttaaggtcagtcagggcacaatctctttccactcagataattatg
ttggtctttagcccaaagtcatagtgaagaatagagttctaaggaagcta
acattccttattcaagattattaaatgaagatcaggaacagaattccaaa
aatctgaattaaccattacaccctacattgtgtccttatttgggaacact
ggggttcaaagtttatattagacaaagatctgactacaacatttagatga
aatggcatcaccagttctatggaaggctttcgactgcattttccatacca
catcttcaacatgatgtaggagcatgtccttcatgggaaaaaaaaaaaaa
aacaactggcatcacctccactcatccccttcatttatagctgtagaatc
aactcatattagaggaagggatacttaggaaaaaagttgccaacagcttg
gaatgaagaagaggttatttagagagacttccatgtcctgtgaacctatt
gattttctggttcttccttgagtcccatgagcattctgggttagttacag
gttgaggatgaaggagctaggtgagatgggcttggaagatgttcacagaa
gtaagacagaagaagtgctttcaaccatattggcctttactttaggatcg
tacgcttgaatttttcagaaggcccatggttgtttccctattcctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_126329266_126330338
seq2: B6Ng01-192E13.g_69_1166 (reverse)

seq1  TAGAG--ATAGGG-AACAACCATGG--CCTCTG-AAAATTC-AGCGTACG  43
      |||||  |||||| |||||||||||  | |||| ||||||| ||||||||
seq2  TAGAGGAATAGGGAAACAACCATGGGCCTTCTGAAAAATTCAAGCGTACG  50

seq1  ATCCT-AAGT-AAGGCC-ATAT-GTTGGAGGCAC-TCTTCTGTC-TAC-T  86
      ||||| |||| |||||| |||| |||| | |||| ||||||||| ||| |
seq2  ATCCTAAAGTAAAGGCCAATATGGTTGAAAGCACTTCTTCTGTCTTACTT  100

seq1  CTGTG-ACATCTTACAAG-CCATCTCACCTAGCTCCTTCATCCTC-ACCT  133
      ||||| ||||||| |||| |||||||||||||||||||||||||| ||||
seq2  CTGTGAACATCTTCCAAGCCCATCTCACCTAGCTCCTTCATCCTCAACCT  150

seq1  GTAACT-ACCCAG-ATGCTCATGGGACTCAA-GAAGAA-CAG-AAATCAA  178
      |||||| |||||| ||||||||||||||||| |||||| ||| |||||||
seq2  GTAACTAACCCAGAATGCTCATGGGACTCAAGGAAGAACCAGAAAATCAA  200

seq1  TAGGTTCACA-GACATGG-AGTCTCTCTAAAT-ACCTCTTCTTCATTCCA  225
      |||||||||| ||||||| ||||||||||||| |||||||||||||||||
seq2  TAGGTTCACAGGACATGGAAGTCTCTCTAAATAACCTCTTCTTCATTCCA  250

seq1  AGCTGTTGGCAACTTTTTTTCCTAAGTATCCCTTCCTCTAATATGAGTTG  275
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGGCAAC-TTTTTTCCTAAGTATCCCTTCCTCTAATATGAGTTG  299

seq1  ATTCTACAGCTATAAATGAAGGGGATGAGTGGAGGTGATGCCAGTTG-TT  324
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTCTACAGCTATAAATGAAGGGGATGAGTGGAGGTGATGCCAGTTGTTT  349

seq1  TTTTTTTTTTTTCCCATGAAGGACATGCTCCTACATCATGTTGAAGATGT  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTCCCATGAAGGACATGCTCCTACATCATGTTGAAGATGT  399

seq1  GGTATGGAAAATGCAGTCGAAAGCCTTCCATAGAACTGGTGATGCCATTT  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGAAAATGCAGTCGAAAGCCTTCCATAGAACTGGTGATGCCATTT  449

seq1  CATCTAAATGTTGTAGTCAGATCTTTGTCTAATATAAACTTTGAACCCCA  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAATGTTGTAGTCAGATCTTTGTCTAATATAAACTTTGAACCCCA  499

seq1  GTGTTCCCAAATAAGGACACAATGTAGGGTGTAATGGTTAATTCAGATTT  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCCAAATAAGGACACAATGTAGGGTGTAATGGTTAATTCAGATTT  549

seq1  TTGGAATTCTGTTCCTGATCTTCATTTAATAATCTTGAATAAGGAATGTT  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTCTGTTCCTGATCTTCATTTAATAATCTTGAATAAGGAATGTT  599

seq1  AGCTTCCTTAGAACTCTATTCTTCACTATGACTTTGGGCTAAAGACCAAC  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTTAGAACTCTATTCTTCACTATGACTTTGGGCTAAAGACCAAC  649

seq1  ATAATTATCTGAGTGGAAAGAGATTGTGCCCTGACTGACCTTAAAAACAC  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATCTGAGTGGAAAGAGATTGTGCCCTGACTGACCTTAAAAACAC  699

seq1  CAAGACAAACCTATTGGGCTGATAGGAGAAACAAGGGAAGAGACAGAAAA  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAAACCTATTGGGCTGATAGGAGAAACAAGGGAAGAGACAGAAAA  749

seq1  GGAAGGAAAAGGAAGAAAGAAAAGGAGGAGAGTCAGGGAAGGCAACAAAA  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAAAGGAAGAAAGAAAAGGAGGAGAGTCAGGGAAGGCAACAAAA  799

seq1  GATATGGAGTATTGGTGGCTTGGCTACTCAGGGTCTGAACACCTTGACAA  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGAGTATTGGTGGCTTGGCTACTCAGGGTCTGAACACCTTGACAA  849

seq1  AGTATAGAGGGAGGCTTAACCAGCCATTTAAAGGCAGACACCAGGAACAG  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGAGGGAGGCTTAACCAGCCATTTAAAGGCAGACACCAGGAACAG  899

seq1  AAGAAAGATCACCCAAAATATAGCCAAAACATCATCAAAAATATAGCTAT  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGATCACCCAAAATATAGCCAAAACATCATCAAAAATATAGCTAT  949

seq1  AACATTCATCAAAAATATAGTTGTAATACCATCAAATATATTACCACAAT  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCATCAAAAATATAGTTGTAATACCATCAAATATATTACCACAAT  999

seq1  ATCATCAAAATGAAATCATGGCTTCACAAAAATTATAGCCAAAACATCAC  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAAAATGAAATCATGGCTTCACAAAAATTATAGCCAAAACATCAC  1049

seq1  GAAAAATTATAGAGTCACAACATAGTTTTGGAGGGAAACAACTGAATTC  1073
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTATAGAGTCACAACATAGTTTTGGAGGGAAACAACTGAATTC  1098