MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-193A02
Chromosome	6 (Build37)
Map Location	100,317,089 - 100,317,956
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Eif4e3, Gpr27, Prok2, LOC384466, LOC626503, LOC100043703, Rybp
Downstream gene	Shq1, LOC625221, BC049816, Ppp4r2, EG545870, LOC100043321, Pdzrn3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Eif4e3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66892 MGI:1914142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14761 MGI:1202299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prok2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50501 MGI:1354178
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC384466 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC626503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 41 ESTs, 7 Proteins pseudo : _no_value

name	LOC100043703 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 mRNAs, 2938 ESTs, 7 Proteins

name	Rybp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56353 MGI:1929059
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Shq1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72171 MGI:1919421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625221 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625221
definition	note : ubiquitin-conjugating enzyme E2 variant 2 pseudogene pseudo : _no_value

name	BC049816 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232313 MGI:2682940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp4r2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232314 MGI:3027896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG545870 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545870 MGI:3644643
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100043321 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043321
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Pdzrn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55983 MGI:1933157
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif4e3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802909 GeneID:66892 MGI:1914142
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 4E member 3 transcript_id : NM_025829.3

name	Gpr27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680072 GeneID:14761 MGI:1202299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 27 transcript_id : NM_008158.1

name	Prok2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82830394 GeneID:50501 MGI:1354178
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prokineticin 2 transcript_id : NM_001037539.1

name	Prok2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7656931 GeneID:50501 MGI:1354178
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prokineticin 2 transcript_id : NM_015768.1

name	LOC100043703 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255388 GeneID:100043703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 mRNAs, 2938 ESTs, 7 Proteins product : similar to tumor protein, translationally-controlled 1 transcript_id : XM_001480658.1

name	Rybp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893368 GeneID:56353 MGI:1929059
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RING1 and YY1 binding protein transcript_id : NM_019743.3

name	Shq1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802471 GeneID:72171 MGI:1919421
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SHQ1 homolog (S. cerevisiae) transcript_id : NM_181590.3

name	BC049816 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130855 GeneID:232313 MGI:2682940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC049816 transcript_id : NM_198612.2

name	Ppp4r2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349007 GeneID:232314 MGI:3027896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 4, regulatory subunit 2 transcript_id : NM_182939.2

name	EG545870 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255390 GeneID:545870 MGI:3644643
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG545870 transcript_id : XM_622395.4

name	Pdzrn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9256641 GeneID:55983 MGI:1933157
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PDZ domain containing RING finger 3 transcript_id : NM_018884.1

name	Eif4e3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385302 CCDS:CCDS20386.1 GeneID:66892 MGI:1914142
definition	codon_start : 1 note : eukaryotic translation initiation factor-3 product : eukaryotic translation initiation factor 4E member 3 protein_id : NP_080105.1

name	Gpr27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680073 CCDS:CCDS20387.1 GeneID:14761 MGI:1202299
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 27 protein_id : NP_032184.1

name	Prok2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82830395 CCDS:CCDS20388.1 GeneID:50501 MGI:1354178
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] GO_function : GO:0001664 - G-protein-coupled receptor binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0000187 - activation of MAPK activity [Evidence ISS]; GO:0001525 - angiogenesis [Evidence ISS]; GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0006935 - chemotaxis [Evidence ISS]; GO:0007623 - circadian rhythm [Evidence IDA]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence ISS]; GO:0006954 - inflammatory response [Evidence ISS]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0045987 - positive regulation of smooth muscle contraction [Evidence ISS]; GO:0048511 - rhythmic process [Evidence IEA]; GO:0019233 - sensory perception of pain [Evidence ISS]; GO:0007283 - spermatogenesis [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; Bv 8 homolog (Bombina variegata); Bombina variegata 8 kD protein; Bombina variegata 8kDa protein; prokineticin 1 product : prokineticin 2 isoform 2 protein_id : NP_001032628.1

name	Prok2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7656932 CCDS:CCDS20389.1 GeneID:50501 MGI:1354178
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] GO_function : GO:0001664 - G-protein-coupled receptor binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0000187 - activation of MAPK activity [Evidence ISS]; GO:0001525 - angiogenesis [Evidence ISS]; GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0006935 - chemotaxis [Evidence ISS]; GO:0007623 - circadian rhythm [Evidence IDA]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence ISS]; GO:0006954 - inflammatory response [Evidence ISS]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0045987 - positive regulation of smooth muscle contraction [Evidence ISS]; GO:0048511 - rhythmic process [Evidence IEA]; GO:0019233 - sensory perception of pain [Evidence ISS]; GO:0007283 - spermatogenesis [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Bv 8 homolog (Bombina variegata); Bombina variegata 8 kD protein; Bombina variegata 8kDa protein; prokineticin 1 product : prokineticin 2 isoform 1 protein_id : NP_056583.1

name	LOC100043703 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255389 GeneID:100043703
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480708.1

name	Rybp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348308 GeneID:56353 MGI:1929059
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003714 - transcription corepressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Ring1 interactor Rybp product : RING1 and YY1 binding protein protein_id : NP_062717.2

name	Shq1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31712010 GeneID:72171 MGI:1919421
definition	codon_start : 1 exception : mismatches in translation product : SHQ1 homolog protein_id : NP_853621.1

name	BC049816 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348470 CCDS:CCDS20390.1 GeneID:232313 MGI:2682940
definition	GO_function : GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence IEA] codon_start : 1 product : hypothetical protein LOC232313 protein_id : NP_941014.1

name	Ppp4r2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33636709 CCDS:CCDS20391.1 GeneID:232314 MGI:3027896
definition	GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA] codon_start : 1 product : protein phosphatase 4, regulatory subunit 2 protein_id : NP_891984.1

name	EG545870 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63545840 GeneID:545870 MGI:3644643
definition	codon_start : 1 product : hypothetical protein protein_id : XP_622395.1

name	Pdzrn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256642 CCDS:CCDS20392.1 GeneID:55983 MGI:1933157
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : semaphorin cytoplasmic domain-associated protein 3A product : PDZ domain containing RING finger 3 protein_id : NP_061372.1

name	LOC384466 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384466
definition	number : 1 pseudo : _no_value

name	LOC100043321 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043321
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:161814
definition	standard_name : RH124992

name	(CDS detail)
type	STS
link
xref	UniSTS:159548
definition	standard_name : AI451927

name	(CDS detail)
type	STS
link
xref	UniSTS:494131
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:487638
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:493241
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:186501
definition	standard_name : Bv8-pending

name	(CDS detail)
type	STS
link
xref	UniSTS:144688
definition	standard_name : Trt

name	(CDS detail)
type	STS
link
xref	UniSTS:130691
definition	standard_name : D6Mit147

name	(CDS detail)
type	STS
link
xref	UniSTS:130692
definition	standard_name : D6Mit147.2

name	(CDS detail)
type	STS
link
xref	UniSTS:123055
definition	standard_name : 10.MMHAP89FLD1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:122728
definition	standard_name : 03.MMHAP15FLA3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130933
definition	standard_name : D6Mit38

name	(CDS detail)
type	STS
link
xref	UniSTS:123958
definition	standard_name : 31.MMHAP7FRC10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:60275
definition	standard_name : A001W26

name	(CDS detail)
type	STS
link
xref	UniSTS:123111
definition	standard_name : 12.MMHAP29FRD9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159549
definition	standard_name : 13.MMHAP34FRE7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:122754
definition	standard_name : 03.MMHAP88FRA9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:210042
definition	standard_name : RH136047

name	(CDS detail)
type	STS
link
xref	UniSTS:208005
definition	standard_name : BE691708

name	(CDS detail)
type	STS
link
xref	UniSTS:130955
definition	standard_name : D6Mit53

name	(CDS detail)
type	STS
link
xref	UniSTS:474700
definition	standard_name : 1810006K21Rik

name	(CDS detail)
type	STS
link
xref	UniSTS:211735
definition	standard_name : RH128427

name	(CDS detail)
type	STS
link
xref	UniSTS:179426
definition	standard_name : AI429718

name	(CDS detail)
type	STS
link
xref	UniSTS:162238
definition	standard_name : RH125416

name	LOC626503 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255387 GeneID:626503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 41 ESTs, 7 Proteins product : similar to ribosomal protein S8 pseudo : _no_value transcript_id : XR_034789.1

clone name	MSMg01-409N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114P10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-341D04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-426B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196C17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-193A02.b
ACC	GA016096
length	868
definition	B6Ng01-193A02.b
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcatgaatactaggtcttaatttaatgaccatacaaacaatgatat tgtgattcttggggaggggggcggcatctggaataagtaacttcctgatt gggtcaaatgattctacgagttttgaaattgttaggcatggtagggcaca cattcaatcccagcacttgtgaagctgaagaatgaagaaggaccatgggt tccaagatggccctagatgagggggtggggcagtgagtccctctgggtaa gctgggccattttcaagaacttccctggcttcaacatgtagactgggaat caccacccactggccagccccccgggcatctacactgctgtccactgtcc atatgttcccccagagcctgcctagctcacaccctggcttcactggggtc ctcgctcaaaggctgttccagaaacctcctggttccctgacgaccctgct ctgattctcacacccgccgtgcctcacgttaccacccatgagcaatgctg tgtctccttggccccctgctgaaggaatcagagacatggctggatgtgct ccctggagggaaaggggtcccagcttcaagatggtacatggggtacagta gactctcaataactattctgtaagaagaaaaggtatggagtcttttcgga gtatatattacccagagccatgtgcacagtagaagtcttacaggttcccc acccccactcccggagggcacattactactttgcctcattgttgtgagtt tgtggtacagcttaccatgacagggaaggcatggcagcaggagcctgtgg gggctgggctcattgcattcagtcgggctacttgagagagatgaattttg ctgcttcagcttgctttc
quality values	Open. Hide. 58 31 28 32 58 22 17 47 62 62 56 62 62 62 62 47 56 54 62 62 62 62 62 62 62 62 47 56 62 59 62 62 62 44 44 49 56 59 56 49 49 59 59 62 62 62 59 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 42 59 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 56 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 56 56 56 56 56 62 62 62 62 62 62 62 62 62 62 56 51 62 56 62 62 62 56 56 56 56 56 56 62 51 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 62 62 62 62 62 62 56 62 62 62 62 54 62 62 62 62 62 62 49 47 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 52 24 47 62 50 46 62 54 50 62 43 62 54 47 62 62 52 52 54 58 58 42 46 54 51 54 54 54 54 58 47 54 54 51 54 22 58 58 52 52 52 34 31 17 30 52 52 52 48 46 37 52 54 47 54 25 36 30 45 48 58 58 42 39 49 52 40 54 52 47 47 34 40 50 35 35 35 40 30 58 52 53 52 50 37 42 27 52 35 47 43 35 42 39 58 58 51 46 19 49 50 37 51 48 32 49 58 58 40 15 51 23 50 50 49 28 48 27 52 49 33 33 33 44 51 27 58 44 21 33 40 33 39 45 41 33 17 31 50 40 50 31 16 43 12 16 9 10 41 35 35 28 32 39 31 24 37 17 33 29 33 46 24 31 51 44 31 35 49 25 34 54 44 29 21 51 35 40 29 28 40 40 37 18 19 45 52 53 39 40 35 26 44 18 40 37 24 31 52 31 28 34 45 37 32 33 31 27 47 32 37 37 41 35 41 21 41 19 46 23 33 47 21 22 35 19 37 45 29 33 18 40 22 14 29 39 13 31 41 52 12 14 28 53 27 20 53 21 16 18 18 30 23 14 27 8 22 18 32 36 33 31 16 21 7 34 26 13 29 28 23 31 20 25 26 27 21 37 29 32 19 7 32 16 24 7 14 6 7 28 15 42 31 21 27 14 29 32 31 13 23 29 18 24 11 12 9 9 12 9 31 16 26 6 24 10 31 19 41 25 15 28 30 30 37 31 19 8 13 11 21 11 12 6 11 25 21 13 17 6 16 13 11 39 12 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_100317089_100317956
seq2: B6Ng01-193A02.b_43_910 (reverse)

seq1  GAAAGCAAGCTG-AGCAGCAAAATTCATCTCTCTC-AGATGCCCGACTGA  48
      |||||||||||| |||||||||||||||||||||| ||  ||||||||||
seq2  GAAAGCAAGCTGAAGCAGCAAAATTCATCTCTCTCAAGTAGCCCGACTGA  50

seq1  ATGCAATG-GGCCAGCCCCCACAGGCTCCTGCTGCCATGCCTTCCCTGTC  97
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATGAGCCCAGCCCCCACAGGCTCCTGCTGCCATGCCTTCCCTGTC  100

seq1  ATGGTAAGCTGTACCCACAAACTCACAACAATGAGGCAAAGTAAGTAATG  147
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  ATGGTAAGCTGTA-CCACAAACTCACAACAATGAGGCAAAGT-AGTAATG  148

seq1  TGCCCTCCGGGAGTGGGGGTGGGGAAACCTGTAAGACTTCTACTGTGCAC  197
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCCCTCCGGGAGTGGGGGTGGGG-AACCTGTAAGACTTCTACTGTGCAC  197

seq1  ATGGCTCTGGGTAATATATACTCCGAAAAGACTCCATACCTTTTCTTCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTGGGTAATATATACTCCGAAAAGACTCCATACCTTTTCTTCTT  247

seq1  ACAGAATAGTTATTGAGAGTCTACTGTACCCCATGTACCATCTTGAAGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATAGTTATTGAGAGTCTACTGTACCCCATGTACCATCTTGAAGCT  297

seq1  GGGACCCCTTTCCCTCCAGGGAGCACATCCAGCCATGTCTCTGATTCCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCCTTTCCCTCCAGGGAGCACATCCAGCCATGTCTCTGATTCCTT  347

seq1  CAGCAGGGGGCCAAGGAGACACAGCATTGCTCATGGGTGGTAACGTGAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGGGCCAAGGAGACACAGCATTGCTCATGGGTGGTAACGTGAGG  397

seq1  CACGGCGGGTGTGAGAATCAGAGCAGGGTCGTCAGGGAACCAGGAGGTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCGGGTGTGAGAATCAGAGCAGGGTCGTCAGGGAACCAGGAGGTTT  447

seq1  CTGGAACAGCCTTTGAGCGAGGACCCCAGTGAAGCCAGGGTGTGAGCTAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACAGCCTTTGAGCGAGGACCCCAGTGAAGCCAGGGTGTGAGCTAG  497

seq1  GCAGGCTCTGGGGGAACATATGGACAGTGGACAGCAGTGTAGATGCCCGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTCTGGGGGAACATATGGACAGTGGACAGCAGTGTAGATGCCCGG  547

seq1  GGGGCTGGCCAGTGGGTGGTGATTCCCAGTCTACATGTTGAAGCCAGGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGGCCAGTGGGTGGTGATTCCCAGTCTACATGTTGAAGCCAGGGA  597

seq1  AGTTCTTGAAAATGGCCCAGCTTACCCAGAGGGACTCACTGCCCCACCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGAAAATGGCCCAGCTTACCCAGAGGGACTCACTGCCCCACCCC  647

seq1  CTCATCTAGGGCCATCTTGGAACCCATGGTCCTTCTTCATTCTTCAGCTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTAGGGCCATCTTGGAACCCATGGTCCTTCTTCATTCTTCAGCTT  697

seq1  CACAAGTGCTGGGATTGAATGTGTGCCCTACCATGCCTAACAATTTCAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTGCTGGGATTGAATGTGTGCCCTACCATGCCTAACAATTTCAAA  747

seq1  ACTCGTAGAATCATTTGACCCAATCAGGAAGTTACTTATTCCAGATGCCG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGTAGAATCATTTGACCCAATCAGGAAGTTACTTATTCCAGATGCCG  797

seq1  CCCCCCTCCCCAAGAATCACAATATCATTGTTTGTATGGTCATTAAATTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCCCCAAGAATCACAATATCATTGTTTGTATGGTCATTAAATTA  847

seq1  AGACCTAGTATTCATGAATTC  868
      |||||||||||||||||||||
seq2  AGACCTAGTATTCATGAATTC  868

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information