BAC Information

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BAC

Clone NameB6Ng01-193O13
Chromosome6 (Build37)
Map Location 73,203,112 - 73,378,882
singlet/doubletdoublet
Overlap geneSuclg1, Olfr210-ps1
Upstream geneSftpb, Usp39, 0610030E20Rik, Tmem150, 2500002L14Rik, Vamp5, Vamp8, Ggcx, Mat2a, Sh2d6, Capg, Rbed1, Retsat, Tgoln1, LOC100038890, Tcf3, Kcmf1, Tmsb10, Dnahc6
Downstream gene4931417E11Rik, LOC100043338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193O13.bB6Ng01-193O13.g
ACCGA016746GA016747
length1,1301,101
definitionB6Ng01-193O13.b B6Ng01-193O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,203,112 - 73,204,249)(73,377,773 - 73,378,882)
sequence
gaattcatgaacacatgcacaccagtaaaagaggaacaggaacacagttc
tcagggttgagtgagaagtgttttcatgacttgagtcaggctaacagtct
cacctgggaggtgctctttggctctgtatttccgcattaacagcacagcc
atcttagaagtggtatagttgttacctagaggagataggactgcctgaca
aacctgtgtgctctgtggaaaacatctttctcagtacctaggccctttcc
ttgagcatcttatgtccgtttgtccttctatggttctgtgattccttggt
aacatggttgtgttacagaccaggaggcttctgtgggtactcttgtcagg
tactcactcatgagcctgtcatagaggccactgatttcccacagttgttt
gctctgctcagtctgcagcagtgataacgatagtaaggtagtaattggtg
atatcccacataccgtatcctctcacatcagccagcgaggtgcataatat
tatctgtattctcacagtgagattatctcagacaaatattcctgtgtgaa
aagattcccaatttatttgtgattgctgcacagtatgtgtctgcagaggt
tagactatttgtgtatagaaggtgtgtgaggacagaccaatgagatggct
cagtggggaaaaacacttcccacgcaagtcagatggcctgaatcccagcc
acaaaacacacataaaggtgtgaggagagaaccgactctacaaactgatc
tctgacctcccatgctggcgatgaaccaacctacctgccttctttcctcc
ctctctccctcccttcattctttccttcctgtctctctttctttctttct
ttctgcacatgggaaagcgtatctggctggacttacttgattttaacgtg
tgaactttatactttctctttgagggcaatggttttcaaccttcctattg
ctgtgaccctttaacatagttcctcatgtcgtgtgaccccaaccataaat
tatttttcatactacttcattaactgtatttgctacttatgaattgtatg
taatatttgtgatacatgtcctaggcttgccttgttaaggttcacttgcc
ccttccttcccctcaaaaagaaggttgtga
gaattctcctgcatctctccagaagcaaagcaaaccggagcagatggagc
ttgctgccctgctcaggatcacatggggaattgcacagactttgggttaa
atactgtttaaaggagtaggtttaatgaatcacctccgagctcttcagaa
gccacccatcagacttgctctgggccttgaacttccagccttcaaagctt
gttggttctactctgttaacaccaaatcactgacagcttgtaagtagggg
caatagcaaacggaaggagcaacattcctgacctctactgactatttaca
gagcaaagctccacgccgctctttaaaacagtaatatgtgctaataatga
tttttccctctccctcctttcttcctcctgcccctcctcattttcttcct
ctccctccttaccagtgttcacctcctcctctctctcctccgcgattcct
catccccctcccccacctcacctgtactaaaaagaggaagaacaaaacat
ctcttgcagcagacacttgccctctctcctagctctgattttctatgggc
aaagtcgtcaccagcccctccccgaaactataaaatgacaagaaaatgta
aaccagcctcctcttccttcttagtcctgccttccagggattagattcct
ctcctacagagagatgtcactaattgatctgcagatccaagcagtgtgcc
cagatcactgcttctgtatcttgtggcttctctggttcttgtgaatgtag
tcacataactcctgtcagatttcttggaccgagtttcagcaagacaagta
agtgagtatggcacctgcctggggtgtctgctgctttctatgggtattcg
agaaatttaagagtgtttgatatgcttacagctggctttaggatagtagt
cattttatacttttctgatgtcagccctagatacactcatacacacttgg
taatcctctgagcctgtataacagttagaatctaagacgatatgatcaca
accaggagtctcagtcgtccagccctaaactgaacagagcagtaaagtta
ccttctcaagtttctaaaagagagttgggtggtacagaagaaatatgaag
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_73203112_73204249
seq2: B6Ng01-193O13.b_49_1178

seq1  GAATTCATGAACACATGCACACCAGTAAAAGAGGAACAGGAACACAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAACACATGCACACCAGTAAAAGAGGAACAGGAACACAGTTC  50

seq1  TCAGGGTTGAGTGAGAAGTGTTTTCATGACTTGAGTCAGGCTAACAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTGAGTGAGAAGTGTTTTCATGACTTGAGTCAGGCTAACAGTCT  100

seq1  CACCTGGGAGGTGCTCTTTGGCTCTGTATTTCCGCATTAACAGCACAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGAGGTGCTCTTTGGCTCTGTATTTCCGCATTAACAGCACAGCC  150

seq1  ATCTTAGAAGTGGTATAGTTGTTACCTAGAGGAGATAGGACTGCCTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGAAGTGGTATAGTTGTTACCTAGAGGAGATAGGACTGCCTGACA  200

seq1  AACCTGTGTGCTCTGTGGAAAACATCTTTCTCAGTACCTAGGCCCTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGTGCTCTGTGGAAAACATCTTTCTCAGTACCTAGGCCCTTTCC  250

seq1  TTGAGCATCTTATGTCCGTTTGTCCTTCTATGGTTCTGTGATTCCTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCATCTTATGTCCGTTTGTCCTTCTATGGTTCTGTGATTCCTTGGT  300

seq1  AACATGGTTGTGTTACAGACCAGGAGGCTTCTGTGGGTACTCTTGTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTTGTGTTACAGACCAGGAGGCTTCTGTGGGTACTCTTGTCAGG  350

seq1  TACTCACTCATGAGCCTGTCATAGAGGCCACTGATTTCCCACAGTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACTCATGAGCCTGTCATAGAGGCCACTGATTTCCCACAGTTGTTT  400

seq1  GCTCTGCTCAGTCTGCAGCAGTGATAACGATAGTAAGGTAGTAATTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTCAGTCTGCAGCAGTGATAACGATAGTAAGGTAGTAATTGGTG  450

seq1  ATATCCCACATACCGTATCCTCTCACATCAGCCAGCGAGGTGCATAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCACATACCGTATCCTCTCACATCAGCCAGCGAGGTGCATAATAT  500

seq1  TATCTGTATTCTCACAGTGAGATTATCTCAGACAAATATTCCTGTGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTATTCTCACAGTGAGATTATCTCAGACAAATATTCCTGTGTGAA  550

seq1  AAGATTCCCAATTTATTTGTGATTGCTGCACAGTATGTGTCTGCAGAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCCCAATTTATTTGTGATTGCTGCACAGTATGTGTCTGCAGAGGT  600

seq1  TAGACTATTTGTGTATAGAAGGTGTGTGAGGACAGACCAATGAGATGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTATTTGTGTATAGAAGGTGTGTGAGGACAGACCAATGAGATGGCT  650

seq1  CAGTGGGGAAAAACACTTCCCACGCAAGTCAGATGGCCTGAATCCCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGGAAAAACACTTCCCACGCAAGTCAGATGGCCTGAATCCCAGCC  700

seq1  ACAAAACACACATAAAGGTGTGAGGAGAGAACCGACTCTACAAACTGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACACACATAAAGGTGTGAGGAGAGAACCGACTCTACAAACTGATC  750

seq1  TCTGACCTCCCATGCTGGCGATGAACCAACCTACCTGCCTTCTTTCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTCCCATGCTGGCGATGAACCAACCTACCTGCCTTCTTTCCTCC  800

seq1  CTCTCTCCCTCCCTTCATTCTTTCCTTCCTGTCTCTCTTTCTTTCTTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCCTCCCTTCATTCTTTCCTTCCTGTCTCTCTTTCTTTCTTTCT  850

seq1  TTCTGCACAT-GGAAAGCGTATCTGGCTGGACTTACTTGATTTTAACGTG  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCACATGGGAAAGCGTATCTGGCTGGACTTACTTGATTTTAACGTG  900

seq1  TGAACTTTATACTTTCTCTTTGAGGGCAATGGTTTTCAACCTTCCTATTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTATACTTTCTCTTTGAGGGCAATGGTTTTCAACCTTCCTATTG  950

seq1  CTGTGACCCTTTAACATAGTTCCTCATGTCGTGGTGACCCCCAACCATAA  999
      |||||||||||||||||||||||||||||||| |||| |||||||||| |
seq2  CTGTGACCCTTTAACATAGTTCCTCATGTCGT-GTGA-CCCCAACCAT-A  997

seq1  AATTATTTTCATTACTACTTCA-TAACTGTATTTTGCTACTTTTATGAAT  1048
      |||||||||   |||||||||| |||||||| ||||||||  ||||||||
seq2  AATTATTTTTCATACTACTTCATTAACTGTA-TTTGCTAC--TTATGAAT  1044

seq1  TGTAATGTAAATATTTGTGATTACCAGTGGTCTTAGGCTGCCCTTGTAAA  1098
      ||| |||| ||||||||||||    |   ||| ||||||  |||||| ||
seq2  TGT-ATGT-AATATTTGTGAT----ACATGTCCTAGGCTTGCCTTGTTAA  1088

seq1  GGGGTCACTTGCCCCTTCC-TCCCCCCAAAA--GAGGTTGTGA  1138
       || ||||||||||||||| ||||| |||||   |||||||||
seq2  -GGTTCACTTGCCCCTTCCTTCCCCTCAAAAAGAAGGTTGTGA  1130

seq1: chr6_73377773_73378882
seq2: B6Ng01-193O13.g_63_1163 (reverse)

seq1  ACTTCATATT--CTCTGTCCCACCCCACTCCTCTTTTTAGAAACTTGAGA  48
      ||||||||||   ||||| |||||| ||| ||| ||||||||||||||||
seq2  ACTTCATATTTCTTCTGTACCACCCAACT-CTC-TTTTAGAAACTTGAGA  48

seq1  AGGTAACTTTACTGCCTTCTGTTCAGTTAAGGGCTTGGACGACTGAGACT  98
      |||||||||||||||  ||||||||||| ||||| |||||||||||||| 
seq2  AGGTAACTTTACTGC--TCTGTTCAGTTTAGGGC-TGGACGACTGAGAC-  94

seq1  TCCTGGTTGGTGATCATTATCCTTCTAGATTCTAACTGTTAATACAGGCT  148
      |||||||| ||||||| |||| |  ||||||||||||||| |||||||||
seq2  TCCTGGTT-GTGATCA-TATCGTCTTAGATTCTAACTGTT-ATACAGGCT  141

seq1  CAGA-GATTACCAAGTGTGTATTGAGTGTATTCTAGGGCTGACATCAGAA  197
      |||| |||||||||||||||| |||||||| |||||||||||||||||||
seq2  CAGAGGATTACCAAGTGTGTA-TGAGTGTA-TCTAGGGCTGACATCAGAA  189

seq1  AAGTTATAAAATGACTACTATCCTAAAGCCAGCTGTAAGCATATCAAACA  247
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAG-TATAAAATGACTACTATCCTAAAGCCAGCTGTAAGCATATCAAACA  238

seq1  CTCTTAAATTTCTCGAATACCCATAGAAAGCAGCAGACACCCCAGGCAGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAATTTCTCGAATACCCATAGAAAGCAGCAGACACCCCAGGCAGG  288

seq1  TGCCATACTCACTTACTTGTCTTGCTGAAACTCGGTCCAAGAAATCTGAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATACTCACTTACTTGTCTTGCTGAAACTCGGTCCAAGAAATCTGAC  338

seq1  AGGAGTTATGTGACTACATTCACAAGAACCAGAGAAGCCACAAGATACAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTATGTGACTACATTCACAAGAACCAGAGAAGCCACAAGATACAG  388

seq1  AAGCAGTGATCTGGGCACACTGCTTGGATCTGCAGATCAATTAGTGACAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGATCTGGGCACACTGCTTGGATCTGCAGATCAATTAGTGACAT  438

seq1  CTCTCTGTAGGAGAGGAATCTAATCCCTGGAAGGCAGGACTAAGAAGGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTAGGAGAGGAATCTAATCCCTGGAAGGCAGGACTAAGAAGGAA  488

seq1  GAGGAGGCTGGTTTACATTTTCTTGTCATTTTATAGTTTCGGGGAGGGGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGCTGGTTTACATTTTCTTGTCATTTTATAGTTTCGGGGAGGGGC  538

seq1  TGGTGACGACTTTGCCCATAGAAAATCAGAGCTAGGAGAGAGGGCAAGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACGACTTTGCCCATAGAAAATCAGAGCTAGGAGAGAGGGCAAGTG  588

seq1  TCTGCTGCAAGAGATGTTTTGTTCTTCCTCTTTTTAGTACAGGTGAGGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCAAGAGATGTTTTGTTCTTCCTCTTTTTAGTACAGGTGAGGTG  638

seq1  GGGGAGGGGGATGAGGAATCGCGGAGGAGAGAGAGGAGGAGGTGAACACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGGGATGAGGAATCGCGGAGGAGAGAGAGGAGGAGGTGAACACT  688

seq1  GGTAAGGAGGGAGAGGAAGAAAATGAGGAGGGGCAGGAGGAAGAAAGGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGAGGGAGAGGAAGAAAATGAGGAGGGGCAGGAGGAAGAAAGGAG  738

seq1  GGAGAGGGAAAAATCATTATTAGCACATATTACTGTTTTAAAGAGCGGCG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGAAAAATCATTATTAGCACATATTACTGTTTTAAAGAGCGGCG  788

seq1  TGGAGCTTTGCTCTGTAAATAGTCAGTAGAGGTCAGGAATGTTGCTCCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTTTGCTCTGTAAATAGTCAGTAGAGGTCAGGAATGTTGCTCCTT  838

seq1  CCGTTTGCTATTGCCCCTACTTACAAGCTGTCAGTGATTTGGTGTTAACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTGCTATTGCCCCTACTTACAAGCTGTCAGTGATTTGGTGTTAACA  888

seq1  GAGTAGAACCAACAAGCTTTGAAGGCTGGAAGTTCAAGGCCCAGAGCAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAACCAACAAGCTTTGAAGGCTGGAAGTTCAAGGCCCAGAGCAAG  938

seq1  TCTGATGGGTGGCTTCTGAAGAGCTCGGAGGTGATTCATTAAACCTACTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGGGTGGCTTCTGAAGAGCTCGGAGGTGATTCATTAAACCTACTC  988

seq1  CTTTAAACAGTATTTAACCCAAAGTCTGTGCAATTCCCCATGTGATCCTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAACAGTATTTAACCCAAAGTCTGTGCAATTCCCCATGTGATCCTG  1038

seq1  AGCAGGGCAGCAAGCTCCATCTGCTCCGGTTTGCTTTGCTTCTGGAGAGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGCAGCAAGCTCCATCTGCTCCGGTTTGCTTTGCTTCTGGAGAGA  1088

seq1  TGCAGGAGAATTC  1110
      |||||||||||||
seq2  TGCAGGAGAATTC  1101