BAC Information

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BAC

Clone NameB6Ng01-194E08
Chromosome6 (Build37)
Map Location 63,267,061 - 63,267,774
singlet/doubletsinglet
Overlap geneGrid2
Upstream geneC130092O11Rik, GA_x5J8B7W6GG0-4757855-4757501, LOC667099
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194E08.bB6Ng01-194E08.g
ACCGA017013GA017014
length7201,187
definitionB6Ng01-194E08.b B6Ng01-194E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttactctaaatgtcataccatttcatgaactgagtccctggact
gaatgaggaggaaaaatagagctgaacatgagtatcaaccttattctact
tcctttgtactaacaaagtgaccagattatgtctcaagcttctgttgcca
tgcttttagtgccatcatagcctgtacactaaaacttctatcagaaagaa
aaccatccatccacccatctttttctttcttttctttctttctttctttc
tttctttctttctttctttctttctttctttctttctttctttcgttcat
tctttctttcgttctttcgttcccttccttccttccttccttccttcctt
ccatccttacttccttccttccttccttcctttctttcctttttttcctc
cttccttccctccctccttctctcctttccttccttccaacctccttttt
cctccgtctttccaatttgcttagttgttattgtcaggtataatatctca
gaaattacatgtcactaattactaaggtaggcagagaagcaccagatatg
attaaggtaaaataggcctgactgagcactaagaggatgagagataatgg
agttcggttttcttcttgaaagtcatttaaggattttttttttcaagaca
gggtttttcggtgtagccctggctgtcctggaactcacttagtagaccag
gctgggcatcgaactcagaa
gaattccaataattttggaatatttaatgtaacttttaataaattacatg
tttgaatatagattttagttttcacgtgatttttaaatgagtataaacat
gcaatgttatatcttataataataaatatataaggcagaaatattattct
aaaaatagactattctctattgttgtgatttagagtggtcctgatagtct
catacatttggttgcttgtttcccagttctagattattgggaaggattag
aaagtatggccttgttgtgaaaggtacatccctgcggttgggttttatgg
ctctacagagcccatgaaagaccctatctcccaccaccctggcctctctt
tctctgttgcccacagatcattatctaaagctattagcttctgcagtaat
gtcatgactgccttcttgccacagggatgataatgcactaacactctgaa
actgtaagcaaaccctcagttaaatagtttcttttataaaagttgcttta
gtcatggtgtttcttcacatcaatagaaaccttaatagaggagataaggc
atgatttaggaactgtcattgaagcttgtctttgaggttccaaaagccca
tacctgatccattctccttctcccatctctctttctctctgtgtgggtat
ctctatcttcatatctccctctctctctgtctttgtgtttgtctctgtgt
atgtctatttctgtctctctctatacgcctctaggttgtataccataaag
taaacttgtgaatttaattttttcaaaacctatttttaatgattgttctt
aaatgctttaacctcccttttagaccaccactcacgaaaggtggtggaaa
agcaaggacatggtggaagtagaagtggttctatttaaaaatggttcctt
ggagcaactcctgtctgtattatctggaaatcagcaagttagttcacagc
cacaccatcagcgcagattcttttgcaacattttacagatacactctcag
ttctgtaggttcggatagcaatcatgatcagcagctattgtcactatcta
gcagacagcagctcagtcttgggaccattagcagagacagccagatacca
gaaagtcctagctgtgcactctcagagagttgatgcagctatgatgagac
atggacacaagcatttcaacctagtcttctaaaacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_63267061_63267774
seq2: B6Ng01-194E08.b_49_768

seq1  GAATTCTTACTCTAAATGTCATACCATTTCATGAACTGAGTCCCTGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTCTAAATGTCATACCATTTCATGAACTGAGTCCCTGGACT  50

seq1  GAATGAGGAGGAAAAATAGAGCTGAACATGAGTATCAACCTTATTCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGAGGAAAAATAGAGCTGAACATGAGTATCAACCTTATTCTACT  100

seq1  TCCTTTGTACTAACAAAGTGACCAGATTATGTCTCAAGCTTCTGTTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTACTAACAAAGTGACCAGATTATGTCTCAAGCTTCTGTTGCCA  150

seq1  TGCTTTTAGTGCCATCATAGCCTGTACACTAAAACTTCTATCAGAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTAGTGCCATCATAGCCTGTACACTAAAACTTCTATCAGAAAGAA  200

seq1  AACCATCCATCCACCCATCTTTTTCTTTCT----TTTCTTTCTTTCTTTC  246
      ||||||||||||||||||||||||||||||    ||||||||||||||||
seq2  AACCATCCATCCACCCATCTTTTTCTTTCTTTTCTTTCTTTCTTTCTTTC  250

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGTTCAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGTTCAT  300

seq1  TCTTTCTTTCGTTCTTTCGTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCGTTCTTTCGTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTT  350

seq1  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCCTTTTTTTCCTC  396
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTTACTTCCTTCCTTCCTTCCTTCCTTTCTTTCCTTTTTTTCCTC  400

seq1  CTTCCTTCCCTCCCTCCTTCTCTCCTTTCCTTCCTTCCAACCTCCTTTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCCTCCCTCCTTCTCTCCTTTCCTTCCTTCCAACCTCCTTTTT  450

seq1  CCTCCGTCTTTCCAATTTGCTTAGTTGTTATTGTCAGGTATAATATCTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGTCTTTCCAATTTGCTTAGTTGTTATTGTCAGGTATAATATCTCA  500

seq1  GAAATTACATGTCACTAATTACTAAGGTAGGCAGAGAAGCACCAGATATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACATGTCACTAATTACTAAGGTAGGCAGAGAAGCACCAGATATG  550

seq1  ATTAAGGTAAAATAGGCCTGACTGAGCACTAAGAGGATGAGAGATAATGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGTAAAATAGGCCTGACTGAGCACTAAGAGGATGAGAGATAATGG  600

seq1  AGTTCGGTTTTCTTCTTGAAAGTCATTTAAGGA-TTTTTTTTTCAAGACA  645
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGTTCGGTTTTCTTCTTGAAAGTCATTTAAGGATTTTTTTTTTCAAGACA  650

seq1  GGGTTTTTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAG  695
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  GGGTTTTTCGGTGTAGCCCTGGCTGTCCTGGAACTCACTTAGTAGACCAG  700

seq1  GCT-GGCATCGAACTCAGAA  714
      ||| ||||||||||||||||
seq2  GCTGGGCATCGAACTCAGAA  720