BAC Information

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BAC

Clone NameB6Ng01-195O17
Chromosome6 (Build37)
Map Location 127,186,419 - 127,322,189
singlet/doubletdoublet
Overlap geneLOC100043578, EG640703
Upstream geneLOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6, Fgf23, 9630033F20Rik, Ccnd2, Tpi-rs11, EG243642
Downstream geneLOC100043848, Parp11, Efcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195O17.bB6Ng01-195O17.g
ACCGA018205GA018206
length1,116687
definitionB6Ng01-195O17.b B6Ng01-195O17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,186,419 - 127,187,524)(127,321,503 - 127,322,189)
sequence
gaattcttttgtctctctttctctttaggtgtgatgagattacagatgta
tactgacaaatctggttttacatgggtcatggggatccaaactctggtcc
tcacatttgcatagtaagcacttcatctactgagccagctctctaacact
tgcttgggcttttgatcctcctgtctcaattttccaagtagctgggatta
cccacttgggtttgacacaaaactgttgctacaaccaccccaaatagcat
atcattctgcaatacccagacttcttacacatcagtaccgttgctatagc
aactctgtgacctggaaagcccatcccactctgttcaggaagcacggctc
agctgcaagaatcacttctcttaaatgagcaagacaatgacataaccaag
aacttaaaattggtttccttacttgcttcattgatgacagttcatgcttt
ggtgaactttgtttagcctttttttttttttcccttcgctacagggttgc
ccaggctgtcctccagctcctgagccgaagtaatcctctggtaccacagg
gctgtgctactacactagattcaatttaactattcttatattcacattta
ttgtgatttttaaagtgaaaattaaagaatagaccctatcccagtaccca
aagctgaaaaaaaatagtctttgaattatctcatgagatatttattgatt
tgaatgagaagggcagcaacttggaagaccccatttaagccatgagaaat
cacctggcctactgacatcgtataatccctgggggtgcatggcacttcgg
cttcagagctctgggctaaggtgtaaggccctagtgtaatcaatctcaag
gaagcctcagatgagtgcggagggagagccttctgcagaggaactagcaa
agacgcgttgaaagtgtaaagattcagaagctaaagatttcatcgtgtgg
actttccacattgatgaaagggggtgcagggcacagggcaggcgcatgct
ggcccggtggaatggtggatgtcagggatgtcatcatccaacattaatag
ttcttgacgacggcaggtctgactgttaatattgtggttggactgcacaa
acaatataaaaatttc
gaattcacccttttctacaaggcatcctcagggacctgcaaccctctgaa
caacaatcagcatcgtggaatggtgagcagtgcagagtcctggctaaaga
atcgcaggagatagtctcctgaccgtctgtgtgaccttcattgagcccct
gacccactgacctcatttcctcatcagaaaaaggagcagaagcagagtat
tagaactgcaggcttgttgaactttaggcttcccctaaatggtctggtac
tgtgacctttaaggtgcaaactagcagcatgactttgtcatctctgctgc
taaacatagccaacttgtgtgtgtattaccagaggcatgaagagggagcc
ggtactatgactaaggcacaaatctgaaactgtttttggtggcttttgtt
tctctcctgtgaaagaaactcagaaggaataagaagttgtattcaatctc
accttttcaccctttcttaacttctgtcatggtcaagtggaataggtcat
gccgtggtcctgccttcagggagctcatgaaacagtagagaattgtcatg
tccacagcagctttctgcatttgtggtaagtggtcaagtaggagccaagg
agaatctgggaaattctctttagttatacaatcttgggcatttatattta
ttgtggttttgttgttgttggattggtttggttagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_127186419_127187524
seq2: B6Ng01-195O17.b_47_1162

seq1  GAATTCTTTTGTCTCTCTTTCTCTTTAGGTGTGATGAGATTACAGATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTCTCTCTTTCTCTTTAGGTGTGATGAGATTACAGATGTA  50

seq1  TACTGACAAATCTGGTTTTACATGGGTCATGGGGATCCAAACTCTGGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACAAATCTGGTTTTACATGGGTCATGGGGATCCAAACTCTGGTCC  100

seq1  TCACATTTGCATAGTAAGCACTTCATCTACTGAGCCAGCTCTCTAACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTGCATAGTAAGCACTTCATCTACTGAGCCAGCTCTCTAACACT  150

seq1  TGCTTGGGCTTTTGATCCTCCTGTCTCAATTTTCCAAGTAGCTGGGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGGCTTTTGATCCTCCTGTCTCAATTTTCCAAGTAGCTGGGATTA  200

seq1  CCCACTTGGGTTTGACACAAAACTGTTGCTACAACCACCCCAAATAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTGGGTTTGACACAAAACTGTTGCTACAACCACCCCAAATAGCAT  250

seq1  ATCATTCTGCAATACCCAGACTTCTTACACATCAGTACCGTTGCTATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTGCAATACCCAGACTTCTTACACATCAGTACCGTTGCTATAGC  300

seq1  AACTCTGTGACCTGGAAAGCCCATCCCACTCTGTTCAGGAAGCACGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTGACCTGGAAAGCCCATCCCACTCTGTTCAGGAAGCACGGCTC  350

seq1  AGCTGCAAGAATCACTTCTCTTAAATGAGCAAGACAATGACATAACCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAAGAATCACTTCTCTTAAATGAGCAAGACAATGACATAACCAAG  400

seq1  AACTTAAAATTGGTTTCCTTACTTGCTTCATTGATGACAGTTCATGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAAATTGGTTTCCTTACTTGCTTCATTGATGACAGTTCATGCTTT  450

seq1  GGTGAACTTTGTTTAGCCTTTTTTTTTTTTTCCCTTCGCTACAGGGTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACTTTGTTTAGCCTTTTTTTTTTTTTCCCTTCGCTACAGGGTTGC  500

seq1  CCAGGCTGTCCTCCAGCTCCTGAGCCGAAGTAATCCTCTGGTACCACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGTCCTCCAGCTCCTGAGCCGAAGTAATCCTCTGGTACCACAGG  550

seq1  GCTGTGCTACTACACTAGATTCAATTTAACTATTCTTATATTCACATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCTACTACACTAGATTCAATTTAACTATTCTTATATTCACATTTA  600

seq1  TTGTGATTTTTAAAGTGAAAATTAAAGAATAGACCCTATCCCAGTACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTTTTAAAGTGAAAATTAAAGAATAGACCCTATCCCAGTACCCA  650

seq1  AAGCTGAAAAAAAATAGTCTTTGAATTATCTCATGAGATATTTATTGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAAAAAAAATAGTCTTTGAATTATCTCATGAGATATTTATTGATT  700

seq1  TGAATGAGAAGGGCAGCAACTTGGAAGACCCCATTTAAGCCATGAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAGAAGGGCAGCAACTTGGAAGACCCCATTTAAGCCATGAGAAAT  750

seq1  CACCTGGCCTACTGACATCGTATAATCCCTGGGGGTGCATGGCACTTCGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGCCTACTGACATCGTATAATCCCTGGGGGTGCATGGCACTTCGG  800

seq1  CTTCAGAGCTCTGGGCTAAGGTGTAAGGCCCTAGTGTAATCAATCTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGCTCTGGGCTAAGGTGTAAGGCCCTAGTGTAATCAATCTCAAG  850

seq1  GAAGCCTCAGATGAGTGCGGAGGGAGAGCCTTCTGCAGAGGAACTAGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTCAGATGAGTGCGGAGGGAGAGCCTTCTGCAGAGGAACTAGCAA  900

seq1  AGACGCGTTGAAAGTGTAAAGATTCAGAAGCTAAAGATTTCATCGTGTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCGTTGAAAGTGTAAAGATTCAGAAGCTAAAGATTTCATCGTGTGG  950

seq1  ACTTTCCACA-TGATGAAAGGGGGTGCAGGGCACAGGGCAGGCGCATGCT  999
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCACATTGATGAAAGGGGGTGCAGGGCACAGGGCAGGCGCATGCT  1000

seq1  GGCCC-GTGGAAT-GTGGATGTCA-GGATGTCATCATCCACCATTAATAG  1046
      ||||| ||||||| |||||||||| ||||||||||||||| |||||||||
seq2  GGCCCGGTGGAATGGTGGATGTCAGGGATGTCATCATCCAACATTAATAG  1050

seq1  -TCTGAACGACGGCAGGTCTGACTG-TAATATTGTG--TTGACTGCAC-A  1091
       |||  ||||||||||||||||||| ||||||||||  | |||||||| |
seq2  TTCTTGACGACGGCAGGTCTGACTGTTAATATTGTGGTTGGACTGCACAA  1100

seq1  ACAATAT-AAAATTTC  1106
      ||||||| ||||||||
seq2  ACAATATAAAAATTTC  1116

seq1: chr6_127321503_127322189
seq2: B6Ng01-195O17.g_67_753 (reverse)

seq1  AACTAACCAAACCAATCCAACAACAACAAAACCACAATAAATATAAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACCAAACCAATCCAACAACAACAAAACCACAATAAATATAAATGC  50

seq1  CCAAGATTGTATAACTAAAGAGAATTTCCCAGATTCTCCTTGGCTCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATTGTATAACTAAAGAGAATTTCCCAGATTCTCCTTGGCTCCTAC  100

seq1  TTGACCACTTACCACAAATGCAGAAAGCTGCTGTGGACATGACAATTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCACTTACCACAAATGCAGAAAGCTGCTGTGGACATGACAATTCTC  150

seq1  TACTGTTTCATGAGCTCCCTGAAGGCAGGACCACGGCATGACCTATTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTCATGAGCTCCCTGAAGGCAGGACCACGGCATGACCTATTCCA  200

seq1  CTTGACCATGACAGAAGTTAAGAAAGGGTGAAAAGGTGAGATTGAATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCATGACAGAAGTTAAGAAAGGGTGAAAAGGTGAGATTGAATACA  250

seq1  ACTTCTTATTCCTTCTGAGTTTCTTTCACAGGAGAGAAACAAAAGCCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTATTCCTTCTGAGTTTCTTTCACAGGAGAGAAACAAAAGCCACC  300

seq1  AAAAACAGTTTCAGATTTGTGCCTTAGTCATAGTACCGGCTCCCTCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGTTTCAGATTTGTGCCTTAGTCATAGTACCGGCTCCCTCTTCA  350

seq1  TGCCTCTGGTAATACACACACAAGTTGGCTATGTTTAGCAGCAGAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGGTAATACACACACAAGTTGGCTATGTTTAGCAGCAGAGATGA  400

seq1  CAAAGTCATGCTGCTAGTTTGCACCTTAAAGGTCACAGTACCAGACCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCATGCTGCTAGTTTGCACCTTAAAGGTCACAGTACCAGACCATT  450

seq1  TAGGGGAAGCCTAAAGTTCAACAAGCCTGCAGTTCTAATACTCTGCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGAAGCCTAAAGTTCAACAAGCCTGCAGTTCTAATACTCTGCTTCT  500

seq1  GCTCCTTTTTCTGATGAGGAAATGAGGTCAGTGGGTCAGGGGCTCAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTTTCTGATGAGGAAATGAGGTCAGTGGGTCAGGGGCTCAATGA  550

seq1  AGGTCACACAGACGGTCAGGAGACTATCTCCTGCGATTCTTTAGCCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACACAGACGGTCAGGAGACTATCTCCTGCGATTCTTTAGCCAGGA  600

seq1  CTCTGCACTGCTCACCATTCCACGATGCTGATTGTTGTTCAGAGGGTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCACTGCTCACCATTCCACGATGCTGATTGTTGTTCAGAGGGTTGC  650

seq1  AGGTCCCTGAGGATGCCTTGTAGAAAAGGGTGAATTC  687
      |||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCTGAGGATGCCTTGTAGAAAAGGGTGAATTC  687