BAC Information

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BAC

Clone NameB6Ng01-196B11
Chromosome6 (Build37)
Map Location 132,811,025 - 132,812,039
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116
Downstream geneTas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196B11.bB6Ng01-196B11.g
ACCGA018326GA018327
length1,1671,002
definitionB6Ng01-196B11.b B6Ng01-196B11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatgccgaatggctgaaaagcacctgaaaaaaaa
aaaaaaaagttcaacatccttagtcatcagagaaatgcaaatcaaaacaa
ccttgagattccacctcacaccagtcagaattgctaagatcaaaaattca
agtagcagcaaatgctggcaaggatttggagaaagaggaatactcctcta
ttgctggtgggattgcaagattgtccaaccactctggaagtcagtctgga
ggttcctcagaaaattggacataatactaccagaagatccaacaataact
ctcctgggcatacacccagaagaagttccaactggtaataagaacacatg
ctccattatgttcatagcagccttatttataatagccataagctggaaag
aacccagttgtccctctacagaagaatggatacagtaaatgtggtacatt
tacacaatggagtactactcagctattaaaaacaatgaatttgtgaaatt
attggacaaatgcatgtatctggaggatatcatccttagtgagataaccc
aatcacaaaagaagtcattagataagcactcactgataagtgaatattag
cccagaaacagaacacccaagatacaatttgaaaaacacaagacaatcaa
gaagagggaagaccaacatgtggatacttcattcctccttagaataggga
acaaaatatccatgaaaggagttacagagacaaatttggagctaagatga
aagaaaggatggactatccagagactaccccacccagggatccatcctat
aatcagctaccaaatccagacactattgcatatgccagcaagattttgct
gaagggaccctggtatagctgtctcatatgaggctatgccagtatctgtc
aaatgcagaagtggatgctcacagtcatctctaagatggaacacagggcc
ctcaatggagaaaaatagagaaagccacccaagggagctgaaccctatag
gtggacacatatgaactaaccagtacccccagagctcatgtctctagctg
catattgtagcagagatggctagtggtcatttactgggagagagcccttt
gattgcaactttatatacctcagttccaggatgtcagggctcagaattga
gttgtttgctaggggga
gaattcagtgcttttgtttccttaagttgccaaggtaacattattagaca
ataaaacttacatgaacaaattcaggtaaataaatatgtatgaaaaatgt
atcatggaagaccaaaccgaggtacattttcaacttttcaaatacaacta
tttattttaagaaactcttcatggtattacacccctgcttcattttcctt
tgtttactgcctttgtgaacaaacatcttagtaagttgaggctgcatggc
tcagtgtccctaggagtgatcaccacgtttcacaaaaagtctttgaaaac
caaaatatcttttgtttctctctgtgatctgctttgtgtttcttcataga
agattgaagctttggtgggatttcaatttatattcaagaccaccctgatt
gacaggctactggtaccatttcatcttcaagccattcctttgtcctgact
taggaaaagagatgccttcacagttctatttcttagctctttgacagaca
aggccattgaggaaaggacctatctatttgaccagtaagacaaaatatgt
caaaaaaaaaaaaaaaaaaaaaaacaagatctccacaagagactcccaga
gctcatctgggtgtttgcaaattatttctggtcgtggtgcctgtttgcaa
tgtggttgatatacccaagtgacacttaattggagaaaacttatcttatt
tttactaatgggtatcaatttcatacagtttcttggacagcattggtttc
ccaatgtctatatccccatcggtatggaatcccataagaactggtagctg
tgcaaggcctctgtgaacttgtatgtgcatcagttctactatacctaaaa
ttcattttttaattagcacacaaaaaaatgcttcatttggtattataacg
aataatatgtcatttgaattgtctttttcctctctttacatggtgtctca
tccctgaatccctttggtcagatcatctctaaataatatctgctttccat
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132811025_132812039
seq2: B6Ng01-196B11.g_63_1064

seq1  GAATTCAGTGCTTTTGTTTCCTTAAGTTGCCAAGGTAACATTATTAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCTTTTGTTTCCTTAAGTTGCCAAGGTAACATTATTAGACA  50

seq1  ATAAAACTTACATGAACAAATTCAGGTAAATAAATATGTATGAAAAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTTACATGAACAAATTCAGGTAAATAAATATGTATGAAAAATGT  100

seq1  ATCATGGAAGACCAAACCGAGGTACATTTTCAACTTTTCAAATACAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGAAGACCAAACCGAGGTACATTTTCAACTTTTCAAATACAACTA  150

seq1  TTTATTTTAAGAAACTCTTCATGGTATTACACCCCTGCTTCATTTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAAGAAACTCTTCATGGTATTACACCCCTGCTTCATTTTCCTT  200

seq1  TGTTTACTGCCTTTGTGAACAAACATCTTAGTAAGTTGAGGCTGCATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTGCCTTTGTGAACAAACATCTTAGTAAGTTGAGGCTGCATGGC  250

seq1  TCAGTGTCCCTAGGAGTGATCACCACGTTTCACAAAAAGTCTTTGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTCCCTAGGAGTGATCACCACGTTTCACAAAAAGTCTTTGAAAAC  300

seq1  CAAAATATCTTTTGTTTCTCTCTGTGATCTGCTTTGTGTTTCTTCATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATCTTTTGTTTCTCTCTGTGATCTGCTTTGTGTTTCTTCATAGA  350

seq1  AGATTGAAGCTTTGGTGGGATTTCAATTTATATTCAAGACCACCCTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAAGCTTTGGTGGGATTTCAATTTATATTCAAGACCACCCTGATT  400

seq1  GACAGGCTACTGGTACCATTTCATCTTCAAGCCATTCCTTTGTCCTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCTACTGGTACCATTTCATCTTCAAGCCATTCCTTTGTCCTGACT  450

seq1  TAGGAAAAGAGATGCCTTCACAGTTCTATTTCTTAGCTCTTTGACAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAAGAGATGCCTTCACAGTTCTATTTCTTAGCTCTTTGACAGACA  500

seq1  AGGCCATTGAGGAAAGGACCTATCTATTTGACCAGTAAGACAAAATATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATTGAGGAAAGGACCTATCTATTTGACCAGTAAGACAAAATATGT  550

seq1  CAAAAAAAAAAAAAAAAAAAAAAACAAGATCTCCACAAGAGACTCCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAAAAAAAAAACAAGATCTCCACAAGAGACTCCCAGA  600

seq1  GCTCATCT-GGTGTTTGCAAATTATTTCTGGTCGTGGTGCCTGTTTGCAA  649
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCTGGGTGTTTGCAAATTATTTCTGGTCGTGGTGCCTGTTTGCAA  650

seq1  TGTGGTTGATATA-CCAAGTGACACTTAATTGGAGAAAACTTATCTTATT  698
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGATATACCCAAGTGACACTTAATTGGAGAAAACTTATCTTATT  700

seq1  TTTACTAATGGGTATCAATTTCATACAGTTTCTTGGACAGCATTGG-TTC  747
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTACTAATGGGTATCAATTTCATACAGTTTCTTGGACAGCATTGGTTTC  750

seq1  CCAATGTCTATATCCCCATCGGTATTGGAATCCCAT-AGAACTGGTAGCT  796
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  CCAATGTCTATATCCCCATCGGTA-TGGAATCCCATAAGAACTGGTAGCT  799

seq1  GTGCAAGGCCTCTGTGAACTTGTATGTGCATCAGTTCTACTATACCTAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGGCCTCTGTGAACTTGTATGTGCATCAGTTCTACTATACCTAAA  849

seq1  ATTCATTTTTTAATTAGCACACAAAAAAATGGCTTCATTTGGGTATTATA  896
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  ATTCATTTTTTAATTAGCACACAAAAAAAT-GCTTCATTT-GGTATTATA  897

seq1  ACGAAT-ATATGTCATTTTGTATTTGTCTTTTTCCCTCTCCTTTACAT-G  944
      |||||| |||||||||||   | |||||||||| ||||| |||||||| |
seq2  ACGAATAATATGTCATTT--GAATTGTCTTTTT-CCTCT-CTTTACATGG  943

seq1  TGTCCTTCATCCCCTTGAATCCCTTTTGTCAGATTCCATCCTTCCCTAAA  994
      ||||  |||||||  ||||||||||| |||||||      | || |||||
seq2  TGTC--TCATCCC--TGAATCCCTTTGGTCAGAT------CATCTCTAAA  983

seq1  TAATATCCTGCTTTCACATCA  1015
      |||||| |||||||| |||||
seq2  TAATAT-CTGCTTTC-CATCA  1002