BAC Information

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BAC

Clone NameB6Ng01-196H24
Chromosome6 (Build37)
Map Location 106,005,504 - 106,006,237
singlet/doubletsinglet
Overlap geneCntn4
Upstream geneLOC384470, LOC100043716, LOC100043350
Downstream geneIl5ra, Trnt1, Crbn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196H24.bB6Ng01-196H24.g
ACCGA018625GA018626
length1,141732
definitionB6Ng01-196H24.b B6Ng01-196H24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctctccccaggtcttcactctttctgcagcttgtggttct
tgacttctttgtagtatcttttacatgtatctgtccatgacgtctaatgg
tctctattacttccttgaaatgctgtcactaacaagaacttttttttttc
atatttattgaacagcacagaaggcattacatatgagaaggaatgaggga
tactttgatgaaatgtttaactgagttttataagggactaagctattgag
tccaactgatcccaaagtactgcaaatatgttgcttaagcaatatagtat
gttgtctctaatatttgtagtgtacacctgttgtatcatgtcacttccta
cctgtttgctgctttcaacaaatgattatcattatgtacatatgcacatt
atgagcattgctctctggaataaggccaggaaaagaaatatagtttgaga
ttataacagtgtattagtttacattgtaaaagccaattatgtaggaaatc
tgatgttgatagttacattgttcttaaaaatatgtgctaaagagatagag
ttaaacagcagaatatcattctttattttttttagtagacttaaggaata
ttattaacttgtgtgtgaggtccagaaagaatccagcgtcttgtagggga
aaagatattttcataacagtgtatcaccacatgatattaagatgctttct
gtaaaagcttgaggacttgatttcaatccatatactctaagtgaaaaaaa
tcattgtgatgataccgaatcaaaatgctaggactggattcatagagctc
attggcagctagtgtagtagtatatttggtgactccagaccaggaaagac
cttgtttcaaataaaacagaatcttccatagcagcacaaaataaaacaca
aaattagagtaacacctgagtaacctctagctctgcacatacaccactta
cacataggaccatgacacagactacacaccagcacacaacaacgcacaca
taacacttacatcattgaatggacgtacactatcacgcgcatgacatcgc
atgcaacagcatcgcttacatcgaattgacgacgcaacatgacgcgcaat
cacagtctgacgcagattgtggctaccagttcactactcac
gaattcacagataattacactttgaaactcttgtgagaaatttacaatat
aggtataaaaatatttgtatccctctttttatttttgttaaaatgtattg
cccagactgtaattgagctgtactactgataaaaggcttacaaaatctgg
aaaataggtttgttttaatgaaaagaaaatgcctgaaacattacatttcc
tcctttccaaaataacatgtcttttgaataacaatgtggctacttttctg
cactaaagccaaaatcaccactaatcatcaaagtacgacttttatcatct
tccccaactggctggccattctttcatcccaaatctaagcatagaaattt
atgctttcattgtaataactgatgagccccacaggctttctgctaggctt
gatgctagtttctacactatgagttaccataaccaccaaccgaagaacat
gcatgggctagacgttgatcctgtatgcattcatagcagatgagcagctt
ggtcttcatgtgggtctccaaacaattggaaaggaggcggtctctaactc
tgttggctaccattggatccccttcccctaactggactgcctggtcaggc
attagtgggagaggattcacttaggcttactgtgactggatattccaggg
tgggatagcacacaagggagagcttccctgttctgagagaagaaggggaa
acacttgaggagggtggagtgggagtagagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_106005504_106006237
seq2: B6Ng01-196H24.g_64_795 (reverse)

seq1  TACTCTACTCCCACTCCCACCTCCCTCAAGTGTTTCCCCTTCTTCTCCTC  50
      ||||||||||||||| |||||  ||||||||||||||||||||||| |||
seq2  TACTCTACTCCCACT-CCACCCTCCTCAAGTGTTTCCCCTTCTTCT-CTC  48

seq1  AGAACAGGGAAGCTCTCCCTTGTGTGCTATCCCACCCTGGAATATCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGGGAAGCTCTCCCTTGTGTGCTATCCCACCCTGGAATATCCAGT  98

seq1  CACAGTAAGCCTAAGTGAATCCTCTCCCACTAATGCCTGACCAGGCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAAGCCTAAGTGAATCCTCTCCCACTAATGCCTGACCAGGCAGTC  148

seq1  CAGTTAGGGGAAGGGGATCCAATGGTAGCCAACAGAGTTAGAGACCGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGGGGAAGGGGATCCAATGGTAGCCAACAGAGTTAGAGACCGCCT  198

seq1  CCTTTCCAATTGTTTGGAGACCCACATGAAGACCAAGCTGCTCATCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAATTGTTTGGAGACCCACATGAAGACCAAGCTGCTCATCTGCT  248

seq1  ATGAATGCATACAGGATCAACGTCTAGCCCATGCATGTTCTTCGGTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGCATACAGGATCAACGTCTAGCCCATGCATGTTCTTCGGTTGGT  298

seq1  GGTTATGGTAACTCATAGTGTAGAAACTAGCATCAAGCCTAGCAGAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGGTAACTCATAGTGTAGAAACTAGCATCAAGCCTAGCAGAAAGC  348

seq1  CTGTGGGGCTCATCAGTTATTACAATGAAAGCATAAATTTCTATGCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGGCTCATCAGTTATTACAATGAAAGCATAAATTTCTATGCTTAG  398

seq1  ATTTGGGATGAAAGAATGGCCAGCCAGTTGGGGAAGATGATAAAAGTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGATGAAAGAATGGCCAGCCAGTTGGGGAAGATGATAAAAGTCGT  448

seq1  ACTTTGATGATTAGTGGTGATTTTGGCTTTAGTGCAGAAAAGTAGCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGATGATTAGTGGTGATTTTGGCTTTAGTGCAGAAAAGTAGCCACA  498

seq1  TTGTTATTCAAAAGACATGTTATTTTGGAAAGGAGGAAATGTAATGTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTCAAAAGACATGTTATTTTGGAAAGGAGGAAATGTAATGTTTC  548

seq1  AGGCATTTTCTTTTCATTAAAACAAACCTATTTTCCAGATTTTGTAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTTCTTTTCATTAAAACAAACCTATTTTCCAGATTTTGTAAGCC  598

seq1  TTTTATCAGTAGTACAGCTCAATTACAGTCTGGGCAATACATTTTAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAGTAGTACAGCTCAATTACAGTCTGGGCAATACATTTTAACAA  648

seq1  AAATAAAAAGAGGGATACAAATATTTTTATACCTATATTGTAAATTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAAGAGGGATACAAATATTTTTATACCTATATTGTAAATTTCTC  698

seq1  ACAAGAGTTTCAAAGTGTAATTATCTGTGAATTC  734
      ||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTTTCAAAGTGTAATTATCTGTGAATTC  732