BAC Information

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BAC

Clone NameB6Ng01-196P20
Chromosome6 (Build37)
Map Location 35,863,491 - 35,864,079
singlet/doubletsinglet
Overlap genenone
Upstream geneStra8, 2010107G12Rik, Cnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312
Downstream geneLOC100039327, 9330158H04Rik, Chrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196P20.bB6Ng01-196P20.g
ACCGA018982GA018983
length592129
definitionB6Ng01-196P20.b B6Ng01-196P20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gtcaaaatccagttattgaagtagacacgatcttttttcctaggtaaaaa
tctgcatttccatatttctttgcagagagctggattgaagttggagttaa
gccatgtgaatgtgacacactcgatttcttaaatatgaacttcatccctg
caattactttactttttaaagattttttttgtattttatgtatatgggtg
ttttgtctgcatgtgtgcatgtgtaccgtatgcatgcatgtagtgtctgc
aaaacccggaagagggcatcggcttctttagaacagggttacagacaatt
ctgaactagcacatgtggcctgcaatctgagcctgggttctctgcaagag
taagaagttcttttaactgcctagccagttaaagccacatcacagcaatt
cttttgcctcttctggtgcttgaccagagattctggcctttgagttggac
gttggatgttggggagggaggtttcagagcatcctactcgaggaacacac
atagacagacagatttacaaaaactaactccttctggcagtgactttcaa
cctctactgccacttttatcctttactagtgggcttgaaatt
atctgaagtacttaaagaagacctaagccatcactggaaagagaggccca
ttgggcacgcaaactttatatgccccagtacaggggaacagcagggccaa
aaagtgggaatgggtgggtaggggagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35863491_35864079
seq2: B6Ng01-196P20.b_52_643

seq1  GTCAAAATCCAGTTATTGAAGTAGACACGATCTTTTTTCCTAGGTAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAATCCAGTTATTGAAGTAGACACGATCTTTTTTCCTAGGTAAAAA  50

seq1  TCTGCATTTCCATATTTCTTTGCAGAGAGCTGGATTGAAGTTGGAGTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTTCCATATTTCTTTGCAGAGAGCTGGATTGAAGTTGGAGTTAA  100

seq1  GCCATGTGAATGTGACACACTCGATTTCTTAAATATGAACTTCATCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTGAATGTGACACACTCGATTTCTTAAATATGAACTTCATCCCTG  150

seq1  CAATTACTTTACTTTTTAAAGATTTTTTTTGTATTTTATGTATATGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACTTTACTTTTTAAAGATTTTTTTTGTATTTTATGTATATGGGTG  200

seq1  TTTTGTCTGCATGTGTGCATGTGTACCGTATGCATGCATGTAGTGTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTGCATGTGTGCATGTGTACCGTATGCATGCATGTAGTGTCTGC  250

seq1  AAAACCCGGAAGAGGGCATCGGCTTCTTTAGAACAGGGTTACAGACAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCGGAAGAGGGCATCGGCTTCTTTAGAACAGGGTTACAGACAATT  300

seq1  CTGAACTAGCACATGTGGCCTGCAATCTGAGCCTGGGTTCTCTGCAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTAGCACATGTGGCCTGCAATCTGAGCCTGGGTTCTCTGCAAGAG  350

seq1  TAAGAAGTTCTTTTAACTGCCTAGCCAGTTAAAGCCACATCACAGCAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTTCTTTTAACTGCCTAGCCAGTTAAAGCCACATCACAGCAATT  400

seq1  CTTTTGCCTCTTCTGGTGCTTGACCAGAGATTCTGGCCTTTGAGTTGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCCTCTTCTGGTGCTTGACCAGAGATTCTGGCCTTTGAGTTGGAC  450

seq1  GTTGGATGTTGGGGAGGGAGGTTTCAGAGCATCCTACTCGAGGAACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATGTTGGGGAGGGAGGTTTCAGAGCATCCTACTCGAGGAACACAC  500

seq1  ATAGACAGACAGATTTAC-AAAACTAACTCC-TCTGGCAGTGAC-TTCAA  547
      |||||||||||||||||| |||||||||||| |||||||||||| |||||
seq2  ATAGACAGACAGATTTACAAAAACTAACTCCTTCTGGCAGTGACTTTCAA  550

seq1  CCTCTACTGCCACTTTTATCCTTTACTAGTGGGCTTGAATTT  589
      ||||||||||||||||||||||||||||||||||||||| ||
seq2  CCTCTACTGCCACTTTTATCCTTTACTAGTGGGCTTGAAATT  592