BAC Information

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BAC

Clone NameB6Ng01-197C04
Chromosome6 (Build37)
Map Location 47,496,628 - 47,497,808
singlet/doubletsinglet
Overlap geneEzh2
Upstream geneCntnap2, LOC622745, LOC100041064, LOC100041078, A930035D04Rik, Cul1
Downstream geneRn4.5s, EG384379, Pdia4, LOC100041154, Zfp786, Zfp398, Zfp282, Zfp212, A230106D06Rik, AI894139, LOC623601, Zfp777, Zfp746, LOC665990, Krba1, Zfp467, Sspo, EG666005, Atp6v0e2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197C04.g
ACCGA019082
length1,171
definitionB6Ng01-197C04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttatttttatttttatttttatttttttagtggagcaaagag
caaagtttgaaaggagccaacagttttatacttcactctacaaaaaccaa
attgcttaaaaataggataccttctgtaggtgccattcattgaatcttct
gtccaaaatccaacaggcaatatatacccacttagttcctaggtaggagt
ggcttggttcaaagaggggaaatggtaaaaaataagatagtacccgtaaa
aaaacaactttcctgcctcatattttcctaatcccttactcctaatcacc
atcacttaaaaaaagaaaacctgtttaggacctatggtacaccttaaact
ataagtggcctaaagcattcacagaagggatacgtccatgataagactta
agaacgtctgcataagactacaagtttctggtgtttaagtgggctatctg
tacctcatactctcttaaactttgtggagagtctttgatcctaagaaccg
tgaaacgttgctgaagaaataacacagataaacagagagtaatacaagat
taatagactacactgtgcaggacacagctctgaaagaaacaaggataaga
acactgcctgtcatatggccaatgtaaatatgaatccagacagcattact
gctggctttaccacctccaccaaaattcttaagagccctccagagtaaca
aagcactgaatctcaccagatgctggtaacactgtggtccacaaggcttg
ttgtccaaagctgtttctgtgttcttcctcttatatgtgttgggtgttgc
atggaaggctgtaaaataagcacaaagtacctgaatatggctataaaaag
tttactttttcatttccccagagccattgggaaaatccagtatctcccac
atatgtagtttacttttctacagcttcccccatctctcacagggtaccct
ccactctgcctccaacctccaagaaagtgacgacatggtaaacctctgga
atgattcataattcttattttccctatgcagtatgatctatgggaataaa
gtatgacttatagacatttactggagtctttaatactctccacaagcgaa
aatatgcaaaaaaaaaccaaccgactttctatttacaaaatattctggac
tctcattcctgttctagggag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_47496628_47497808
seq2: B6Ng01-197C04.g_67_1237

seq1  GAATTCCTTTATTTTTATTTTTATTTTTATTTTTTTAGTGGAGCAAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTATTTTTATTTTTATTTTTATTTTTTTAGTGGAGCAAAGAG  50

seq1  CAAAGTTTGAAAGGAGCCAACAGTTTTATACTTCACTCTACAAAAACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTGAAAGGAGCCAACAGTTTTATACTTCACTCTACAAAAACCAA  100

seq1  ATTGCTTAAAAATAGGATACCTTCTGTAGGTGCCATTCATTGAATCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAAAAATAGGATACCTTCTGTAGGTGCCATTCATTGAATCTTCT  150

seq1  GTCCAAAATCCAACAGGCAATATATACCCACTTAGTTCCTAGGTAGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAATCCAACAGGCAATATATACCCACTTAGTTCCTAGGTAGGAGT  200

seq1  GGCTTGGTTCAAAGAGGGGAAATGGTAAAAAATAAGATAGTACCCGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGTTCAAAGAGGGGAAATGGTAAAAAATAAGATAGTACCCGTAAA  250

seq1  AAAACAACTTTCCTGCCTCATATTTTCCTAATCCCTTACTCCTAATCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACTTTCCTGCCTCATATTTTCCTAATCCCTTACTCCTAATCACC  300

seq1  ATCACTTAAAAAAAGAAAACCTGTTTAGGACCTATGGTACACCTTAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTAAAAAAAGAAAACCTGTTTAGGACCTATGGTACACCTTAAACT  350

seq1  ATAAGTGGCCTAAAGCATTCACAGAAGGGATACGTCCATGATAAGACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGGCCTAAAGCATTCACAGAAGGGATACGTCCATGATAAGACTTA  400

seq1  AGAACGTCTGCATAAGACTACAAGTTTCTGGTGTTTAAGTGGGCTATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGTCTGCATAAGACTACAAGTTTCTGGTGTTTAAGTGGGCTATCTG  450

seq1  TACCTCATACTCTCTTAAACTTTGTGGAGAGTCTTTGATCCTAAGAACCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCATACTCTCTTAAACTTTGTGGAGAGTCTTTGATCCTAAGAACCG  500

seq1  TGAAACGTTGCTGAAGAAATAACACAGATAAACAGAGAGTAATACAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACGTTGCTGAAGAAATAACACAGATAAACAGAGAGTAATACAAGAT  550

seq1  TAATAGACTACACTGTGCAGGACACAGCTCTGAAAGAAACAAGGATAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGACTACACTGTGCAGGACACAGCTCTGAAAGAAACAAGGATAAGA  600

seq1  ACACTGCCTGTCATATGGCCAATGTAAATATGAATCCAGACAGCATTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCCTGTCATATGGCCAATGTAAATATGAATCCAGACAGCATTACT  650

seq1  GCTGGCTTTACCACCTCCACCAAAATTCTTAAGAGCCCTCCAGAGTAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTTACCACCTCCACCAAAATTCTTAAGAGCCCTCCAGAGTAACA  700

seq1  AAGCACTGAATCTCACCAGATGCTGGTAACACTGTGGTCCACAAGGCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTGAATCTCACCAGATGCTGGTAACACTGTGGTCCACAAGGCTTG  750

seq1  TTGTCCAAAGCTGTTTCTGTGTTCTTCCTCTTATATGTGTTGGGTGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCAAAGCTGTTTCTGTGTTCTTCCTCTTATATGTGTTGGGTGTTGC  800

seq1  ATGGAAGGCTGTAAAATAAGCACAAAGTACCTGAATATGGCTATAAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGGCTGTAAAATAAGCACAAAGTACCTGAATATGGCTATAAAAAG  850

seq1  TTTACTTTTTCATTTCCCCAGAGCCATT-GGAAAATCCAGTATCTCCCAC  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTACTTTTTCATTTCCCCAGAGCCATTGGGAAAATCCAGTATCTCCCAC  900

seq1  ATATGTAGTTTAC-TTTCTACAGCTTCCCCCATCTCTCACAGGGTACCCT  948
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGTTTACTTTTCTACAGCTTCCCCCATCTCTCACAGGGTACCCT  950

seq1  CCACTCTGCCTCCAACCTCCAAGAAAGGTGACGACATGGTAAA-CTCTGG  997
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  CCACTCTGCCTCCAACCTCCAAGAAA-GTGACGACATGGTAAACCTCTGG  999

seq1  AATGATTCATAATTCTTATTTTCCCTATGCAAGTATGATCTATGGGAATA  1047
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATGATTCATAATTCTTATTTTCCCTATGC-AGTATGATCTATGGGAATA  1048

seq1  AAGTATGAC-TATAGACATTTACTTGAGTCTTTAGTA-TCTCCAACAAGT  1095
      ||||||||| |||||||||||||| ||||||||| || ||||| ||||| 
seq2  AAGTATGACTTATAGACATTTACTGGAGTCTTTAATACTCTCC-ACAAGC  1097

seq1  GAAAAATATTGGAAAAAAAAAAAACACAACAGACTTTCTAATTTTACAAA  1145
      | |||||||  | |||||||||    |||| |||||||||  ||||| ||
seq2  G-AAAATAT--GCAAAAAAAAA---CCAACCGACTTTCTA--TTTAC-AA  1138

seq1  AATATTCTGGCATCTACAATTTCCCTGTCTAGGGAG  1181
      ||||||||||  ||| ||  ||||   |||||||||
seq2  AATATTCTGGACTCT-CA--TTCCTGTTCTAGGGAG  1171