BAC Information

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BAC

Clone NameB6Ng01-198N19
Chromosome6 (Build37)
Map Location 20,362,843 - 20,363,905
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100040838, Kcnd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198N19.bB6Ng01-198N19.g
ACCGA020347GA020348
length8291,079
definitionB6Ng01-198N19.b B6Ng01-198N19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaagtgatttatgaaagccctttttgatgtcctctatcatca
tcatgagaaatgtttttaaatctgggtctagattttcagttgtgtttggg
tgtccaggactaggtggggtgggagtgctgcgttctgatgatggtgagtg
gtcttgatttctgttagtaggattcttacgtttgcctttcgccatctggt
aatctctgaagctagctgttatagttgtctctgttaagagcttgttcttc
aggtgactctgttagcctctataagcagacctgggagggtagctctctcc
tttttttcagtgaacagtgtattctctgcaggtaagctctcttcttgcag
ggaaggtacccagatatctggtgttcgaaccggcctcctggcagaagttg
tgttccactcactagaggtcttaggatcccgtgtggaatcctgtgtgggc
ccttgggggtgtcaggcgactccgctggcaaggtaccctggtgctctagt
ggagtggaagggacttgtgcccctggtcaggcccgggtagtctgcttccc
tatttactgcagtctcaggttccgcgagattggattggggcaggcgctgt
gttccactcaccagaggtcttaggatcccgtggggaatcctgtgtgggcc
cttgcgggtgtcgggagcctctgctggcaaggtaccctggtgctcgagtg
gggcggaagggactcgtgccccaggtcaggcccgggtactctgcttccct
atttaccacagtctcagttctgcgtgattctcagtcttgttttccaatgg
atttcaagaacacaagcccagtgactgga
gaattcccctttcactctcaaaaagcaatacagaaatagactcacaatca
ctgttccattttgaaatagagctggccacaattctatccaactttcctgc
agtgtaatcaaataaactgcacacaaagatggaggaaatgaaataacaga
ctttagctcctaccaccaagaagtttatattatatccatggttcacagct
tcagacaatcagatgacagatgctgaaaaatagcatctcaagacacatca
gctgaaatgtcagagatgtttcaaactcttgataagagagaagactggta
attgtggaaacataattccatagaggaggaacaagtccttttcaatcact
gctgtagaattcttgcctcagatggttccttatcagttccagtaagtaaa
tggacagatggaacccctaacgtcactgaatcggttactttgttcttgtc
agtgtgacagtttacatttcttttttatttcttagtctttatatgttatt
ttaagttataaaaatacctcaatattaataaattaattggtgtagttatc
tattctatagaaataaacaagaaaaggactacacagaaaacttcataata
aattaaaacctcctttagatttttaaaaccccaatagctgatgaccatta
gacaatatcagagatatcagagtgtataaggaatgaaccgctgcagaatt
agtgttgacttggtgttcattcttatatgtgtgattaaataagaatgttt
cattaaatactctgtgaagattcttcttctgtgttatttatctaggaaat
ttctttagaaccatgcctttagaacacattgtgtttgtggatcatctaga
tcaacataaaaattcttttaatactatctccttgactccagtatacttgg
gttcttgttatagtaataaacagacatacttctgtgcagtaatagttttc
taatacaatagaataaaaagtaatggtgctcaaataacaactaagctaaa
ataattcaggaatactttaaaaaggcttgttttttcctaaggcgacagaa
catcatgctaagaatattggggaaccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_20362843_20363905
seq2: B6Ng01-198N19.g_67_1145

seq1  GAATTCCCCTTTCACTCTCAAAAAGCAATACAGAAATAGACTCACAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTTTCACTCTCAAAAAGCAATACAGAAATAGACTCACAATCA  50

seq1  CTGTTCCATTTTGAAATAGAGCTGGCCACAATTCTATCCAACTTTCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCATTTTGAAATAGAGCTGGCCACAATTCTATCCAACTTTCCTGC  100

seq1  AGTGTAATCAAATAAACTGCACACAAAGATGGAGGAAATGAAATAACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAATCAAATAAACTGCACACAAAGATGGAGGAAATGAAATAACAGA  150

seq1  CTTTAGCTCCTACCACCAAGAAGTTTATATTATATCCATGGTTCACAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTCCTACCACCAAGAAGTTTATATTATATCCATGGTTCACAGCT  200

seq1  TCAGACAATCAGATGACAGATGCTGAAAAATAGCATCTCAAGACACATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAATCAGATGACAGATGCTGAAAAATAGCATCTCAAGACACATCA  250

seq1  GCTGAAATGTCAGAGATGTTTCAAACTCTTGATAAGAGAGAAGACTGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAATGTCAGAGATGTTTCAAACTCTTGATAAGAGAGAAGACTGGTA  300

seq1  ATTGTGGAAACATAATTCCATAGAGGAGGAACAAGTCCTTTTCAATCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGAAACATAATTCCATAGAGGAGGAACAAGTCCTTTTCAATCACT  350

seq1  GCTGTAGAATTCTTGCCTCAGATGGTTCCTTATCAGTTCCAGTAAGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGAATTCTTGCCTCAGATGGTTCCTTATCAGTTCCAGTAAGTAAA  400

seq1  TGGACAGATGGAACCCCTAACGTCACTGAATCGGTTACTTTGTTCTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGATGGAACCCCTAACGTCACTGAATCGGTTACTTTGTTCTTGTC  450

seq1  AGTGTGACAGTTTACATTTCTTTTTTATTTCTTAGTCTTTATATGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGACAGTTTACATTTCTTTTTTATTTCTTAGTCTTTATATGTTATT  500

seq1  TTAAGTTATAAAAATACCTCAATATTAATAAATTAATTGGTGTAGTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTATAAAAATACCTCAATATTAATAAATTAATTGGTGTAGTTATC  550

seq1  TATTCTATAGAAATAAACAAGAAAAGGACTACACAGAAAACTTCATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTATAGAAATAAACAAGAAAAGGACTACACAGAAAACTTCATAATA  600

seq1  AATTAAAACCTCCTTTAGATTTTTAAAACCCCAATAGCTGATGACCATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAACCTCCTTTAGATTTTTAAAACCCCAATAGCTGATGACCATTA  650

seq1  GACAATATCAGAGATATCAGAGTGTATAAGGAATGAACCGCTGCAGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATATCAGAGATATCAGAGTGTATAAGGAATGAACCGCTGCAGAATT  700

seq1  AGTGTTGACTTGGTGTTCATTCTTATATGTGTGATTAAATAAGAATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGACTTGGTGTTCATTCTTATATGTGTGATTAAATAAGAATGTTT  750

seq1  CATTAAATACTCTGTGAAGATTCTTCTTCTGTGTTATTTATCTAGGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATACTCTGTGAAGATTCTTCTTCTGTGTTATTTATCTAGGAAAT  800

seq1  TTCTTTAGAACCATGCCTTTAGAACACATTGTGTTTGTGGATCATCTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGAACCATGCCTTTAGAACACATTGTGTTTGTGGATCATCTAGA  850

seq1  TCAACATAAAAATTCTTTTAATACTATCTCCTTGACTCCAGTATACTT-G  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCAACATAAAAATTCTTTTAATACTATCTCCTTGACTCCAGTATACTTGG  900

seq1  GTTCTTGTTATAGT-ATAAACAGACATACTTCTGTGCAGTTATAGTTTTC  948
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  GTTCTTGTTATAGTAATAAACAGACATACTTCTGTGCAGTAATAGTTTTC  950

seq1  T-ATACAATAGAAT-AAAAGTAAT-GTGCTCAAAT-ACAACTAAGCTAAA  994
      | |||||||||||| ||||||||| |||||||||| ||||||||||||||
seq2  TAATACAATAGAATAAAAAGTAATGGTGCTCAAATAACAACTAAGCTAAA  1000

seq1  TTAA-TCAG--ATACTTT-AAAAGGC-TGTTTTT--CTAAGGCGACAG-A  1036
       ||| ||||  ||||||| ||||||| |||||||  |||||||||||| |
seq2  ATAATTCAGGAATACTTTAAAAAGGCTTGTTTTTTCCTAAGGCGACAGAA  1050

seq1  CATCATG-TAAGAATATTGGGG-ACCCTG  1063
      ||||||| |||||||||||||| ||||||
seq2  CATCATGCTAAGAATATTGGGGAACCCTG  1079