BAC Information

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BAC

Clone NameB6Ng01-198O12
Chromosome6 (Build37)
Map Location 10,309,961 - 10,310,635
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198O12.b
ACCGA020381
length1,015
definitionB6Ng01-198O12.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaactcttcagctggggaacagggtacccgtaagtatagcttt
acaaggtaagtctggtcttgaactttctaacgaaattcaagacagtctat
cagaagtaaagtgggaaatagctttacaaggtatgtttggccttgaactt
tctctagtgttaggagcctttttgttccttttcacatgttatcacgcggt
taagacacttcagtatttgccaggcattggcatagtctcacaggagacag
ctataccatggtcctgtcagcaaaatcttgttggcgtatgcaatagaggt
tttggtggttgttgatggaatggatccccaattggggcagtttctgtatg
gtccttccttcagtattagctccacattttgtctctgtaactcgttccat
gggtgttttgttcccccttctaagaagaaacaaagtatccacacttttgt
cttccttcttcttgagattcatgtgttttgcaaattgtatctccagtttt
ctaagtttctgggctaatatccacttatcagtgagtgcatatcatgtgtg
ttcttttgtgattggattacctcattcaggatgatattctccaaatccat
caatttatctaggaaattcataaattcattgttttgtaatacctgagtag
tactccattgtgtaaacttaccacattttctgtatccattcctctgttga
ggggcatctgggttctttccagcttctggctattataaataaggctgtta
tgaacatagtggagtatgtgtccgtattaaaagttgaaacatcttctggg
tatatgcccaggagtggtattgctcgatattccaaagccatacattttaa
gaaagggtgaggagtgtaatatgagagtttttgggagaaagaacaaaatt
gccgcagaccttttcggtccctgtgtctgcgtggaacgggggtcttctcg
acgcgagttggcaaagtgttggaatggaatgaacagaacagatccacacg
cagggaagttgtgtg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10309961_10310635
seq2: B6Ng01-198O12.b_380_1061

seq1  GGGGCAGTTTCTGTATGGTCCTTCCTTCAGTATTAGCTCCACATTTTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGTTTCTGTATGGTCCTTCCTTCAGTATTAGCTCCACATTTTGTC  50

seq1  TCTGTAACTCGTTCCATGGGTGTTTTGTTCCCCCTTCTAAGAAGAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAACTCGTTCCATGGGTGTTTTGTTCCCCCTTCTAAGAAGAAACAA  100

seq1  AGTATCCACACTTTTGTCTTCCTTCTTCTTGAGATTCATGTGTTTTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCACACTTTTGTCTTCCTTCTTCTTGAGATTCATGTGTTTTGCAA  150

seq1  ATTGTATCTCCAGTTTTCTAAGTTTCTGGGCTAATATCCACTTATCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATCTCCAGTTTTCTAAGTTTCTGGGCTAATATCCACTTATCAGTG  200

seq1  AGTGCATATCATGTGTGTTCTTTTGTGATTGGATTACCTCATTCAGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATATCATGTGTGTTCTTTTGTGATTGGATTACCTCATTCAGGATG  250

seq1  ATATTCTCCAAATCCATCAATTTATCTAGGAAATTCATAAATTCATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTCCAAATCCATCAATTTATCTAGGAAATTCATAAATTCATTGTT  300

seq1  TTGTAATACCTGAGTAGTACTCCATTGTGTAAACTTACCACATTTTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATACCTGAGTAGTACTCCATTGTGTAAACTTACCACATTTTCTGT  350

seq1  ATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTAT  400

seq1  TATAAATAAGGCTGTTATGAACATAGTGGAGTATGTGTCCGTATTAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAAGGCTGTTATGAACATAGTGGAGTATGTGTCCGTATTAAAAG  450

seq1  TTGAAACATCTTCTGGGTATATGCCCAGGAGTGGTATTGCTCGATATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACATCTTCTGGGTATATGCCCAGGAGTGGTATTGCTCGATATTCC  500

seq1  AAAGCCATACATTTTAAG-AAGGGTGAGGAGTGTAATATGAGAGTTTTT-  548
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  AAAGCCATACATTTTAAGAAAGGGTGAGGAGTGTAATATGAGAGTTTTTG  550

seq1  GGAGAAAGAAACAAAATTGCCGCAGACCTTTTCGGTCCCTGTGTCTGCGT  598
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAG-AACAAAATTGCCGCAGACCTTTTCGGTCCCTGTGTCTGCGT  599

seq1  GGAAC-GGGGTC-TCTCGACGCGAGTGGGCAAAGTGT--GGATGG-ATG-  642
      ||||| |||||| ||||||||||||| ||||||||||  | |||| ||| 
seq2  GGAACGGGGGTCTTCTCGACGCGAGTTGGCAAAGTGTTGGAATGGAATGA  649

seq1  ACAG-ACAGACACACACGCAGGAGAGTTTGTGTG  675
      |||| |||||  |||||||||| ||  |||||||
seq2  ACAGAACAGATCCACACGCAGG-GAAGTTGTGTG  682


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