MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-200B10
Chromosome	6 (Build37)
Map Location	9,768,943 - 9,770,128
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040238, Nxph1
Downstream gene	LOC330264, LOC100040285
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Nxph1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18231 MGI:107492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC330264 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:330264
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	LOC100040285 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040238 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254846 GeneID:100040238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100040238 transcript_id : XM_001474333.1

name	Nxph1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357588 GeneID:18231 MGI:107492
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurexophilin 1 transcript_id : NM_008751.3

name	LOC100040238 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254847 GeneID:100040238
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474383.1

name	Nxph1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45598386 GeneID:18231 MGI:107492
definition	GO_function : GO:0005102 - receptor binding [Evidence IDA] codon_start : 1 exception : mismatches in translation product : neurexophilin 1 protein_id : NP_032777.2

name	LOC330264 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:330264
definition	number : 1 pseudo : _no_value

name	LOC100040285 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040285
definition	number : 2 pseudo : _no_value

name	LOC100040285 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040285
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:143937
definition	standard_name : Mx1

name	(CDS detail)
type	STS
link
xref	UniSTS:224995
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:159482
definition	standard_name : RH118299

name	(CDS detail)
type	STS
link
xref	UniSTS:207928
definition	standard_name : AU017803

name	(CDS detail)
type	STS
link
xref	UniSTS:130809
definition	standard_name : D6Mit260

name	(CDS detail)
type	STS
link
xref	UniSTS:130779
definition	standard_name : D6Mit233

name	(CDS detail)
type	STS
link
xref	UniSTS:124597
definition	standard_name : 45.MMHAP90FRG12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130748
definition	standard_name : D6Mit203

name	(CDS detail)
type	STS
link
xref	UniSTS:122870
definition	standard_name : 06.MMHAP84FRB9.seq

clone name	MSMg01-316P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512J11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-388P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510L08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-472B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051N23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-200B10.b	B6Ng01-200B10.g
ACC	GA021245	GA021246
length	1,110	1,196
definition	B6Ng01-200B10.b	B6Ng01-200B10.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccacaagaagaagaacagtgtcaggtaacctggaaccttggggct ttcagaggctgagcatacaggggctggacattggactccctaacatatat accagatgttcagattggtcttcatgtggttcctgaacacctggagtgta ggttattccacaagcttttccctgtccatgggatatgttcttttagctgg ggtgccaagtctagcctcagtgggagacaatgaaccaatcctcatagaga cttgatgtatcattttagaagaatatccaaggtggtgggaaaagaaacct gctcagaggagaagtggcaaagaaactggtgtggggtgagcattatggga ggggctgactgagaggtggcacttagtgggacataaagagaatgaagaaa aaagaaaaaagaaagaaagaaatttcctgaatgaaactccatgagatatt tcttaagtgctcattgatgtgagaaagccctgcccactgggtggtgacat actgggaatgttgttcttggctgtatgctggctattcttcattatcaatt tgactatatcttgaattaactaaagcccaagaagttggacatacttgtga aaggttattattaatttttttaatattggatcattttgagctaagatgat ttagcttcaataaaggtcttttggagtcagaagaccttacttaatttttg ggctacacttgattgcaccttatataaaggacatagaataaagatgctct tgctttgacttcttgctttcactgcttgccttcaccttcactggccagct cattccttggctagtatttagagctttacatcttttgggattgtgatata taattgaagacccatcttgagacatctagcctttgtggaccaaaaccaca aattgggattcttgggacttttctattgggagacatcagtgttgtaacaa tttaaattcacaaacctaattctactttaggttcatgctaaatttcttgc ccttaacctcttcttaaatgtttaaataaggaactggcaactatgtaagg ccaaatataaaacccttcttatttccaccatgtcctttttgggttcagtg gttattttca	gaattccttgaaatattaatcttttattcgtttatccttcctttcaggaa catttgtaagacatatatgcttgaagttataatatgaatttcaaaaacag ttcttttgttcatttttaattttctgtttgagaacattattttgctatat catcaactttaaaatattactaggattaccctaataattatttagtgatt accccgctgcaaatattagtttagaggaattttcttcatttaagcttttg tttgaggaggcttttcttctacaattttttttttatatttcaattttttc tatataatctttatttcaagatatatttaaaactcctttgtgtttgtttt tcctcataatggtatgtatgttcatatagagtaacattttgtttcttttc atgacacacaactatctcctggattctatgtatctatattttatccttcc ttggtactaattaccattgtcttgttttaactcagttaatgttctagatt aataaatttgaaagactttgaattttgtattttaaacatcaaaggtctgg aataaagaaggatttaagatattttatctagaaattttgattttaaattt cacactgaaaaatctataggttaaataaagacaaaatattggtgcagtgg tagcatacaagccttacaaagacactggttctttgtttcatatctaggtg tacaaaacctggtaaatatagcagaaacttgtgtggaactgaagttcatt caaggcaaataaattgagggaaaatttgaagaaaagattcataatttaga aatacccactaagaacaaagatagtataagtcagtataagtcactgaggc agatgagcagaataacatgaagaatgaaaatgaaggacatggaaaagtca catttactttctacattatcttttaaagtataaaattaatatattatcct ctgtttagatatttattatttccatggttttctataaattttaatattgt tttaaataattatttattgggacttataatggtattttaaattttactat tttagaaattaaagttactatattgaatacatgttatccggaatattatt atatttattcccttgaagttagaaacaagaaatttcagataagtctatcg tccatctcttacatatttgggtgttaggttaatctctgagaagaca
quality values	Open. Hide. 58 22 32 39 54 54 32 15 49 36 46 52 38 52 52 62 54 52 62 43 52 41 56 56 62 62 47 32 62 62 62 56 11 25 24 13 19 9 14 21 11 14 15 14 22 22 49 62 62 62 62 62 59 38 34 43 43 46 51 62 62 46 59 62 59 62 59 62 59 62 62 54 62 59 62 46 36 26 46 27 45 36 40 27 35 36 32 32 45 46 59 62 62 62 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 54 54 56 62 59 59 50 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 59 59 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 59 62 62 56 62 62 59 62 62 62 62 62 62 62 54 54 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 59 46 54 59 62 62 62 62 62 62 62 62 59 62 48 54 62 59 62 62 59 59 62 62 59 56 56 62 56 62 62 62 62 62 62 62 62 62 62 62 59 56 43 56 56 50 56 50 59 51 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 47 62 59 43 46 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 44 37 62 47 47 54 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 43 43 62 62 56 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 56 47 47 42 56 56 56 56 62 30 28 27 41 39 42 50 42 62 52 47 48 52 52 46 31 52 50 62 52 62 62 62 62 42 41 36 52 52 46 47 23 62 62 43 52 48 62 62 62 62 62 62 58 58 58 58 50 58 52 54 54 42 31 31 28 58 52 52 54 52 58 39 58 35 54 48 45 42 37 54 37 58 54 58 53 22 45 52 48 47 48 42 54 54 47 39 46 52 47 31 31 52 32 54 54 54 54 54 58 33 58 42 54 54 52 31 54 36 25 54 52 54 35 58 46 54 50 37 27 40 11 58 58 58 51 54 58 51 47 49 37 48 40 53 58 58 58 41 32 49 51 41 53 53 46 50 49 32 21 37 50 38 47 41 27 43 50 50 33 31 32 28 21 22 43 39 41 32 40 28 13 28 39 53 58 39 40 39 22 13 48 19 26 32 25 36 42 51 25 13 32 23 40 50 50 37 32 42 39 58 39 35 20 32 19 58 27 39 39 15 40 43 40 58 39 30 40 39 44 44 5 8 18 28 40 29 26 29 27 19 24 18 13 16 29 9 10 14 15 11 16 15 13 51 7 14 27 50 26 35 15 54 13 26 30 8 27 32 22 53 51 20 18 44 29 20 18 51 44 40 30 24 27 26 20 12 21 13 11 14 9 25 14 29 22 21 7 40 22 12 12 18 8 24 34 19 6 12 18 19 51 24 6 13 16 13 22 9 52 23 15 7 20 24 32 9 18 19 11 15 7 21 21 21 41 12 36 22 37 30 32 34 9 47 25 29 47 8 27 33 42 10 25 20 23 32 32 20 33 10 8 8 8 8 51 11 33 11 31 22 46 22 31 14 6 8 25 12 6 31 8 31 9 23 6 9 8 5 8 13 9 20 7 14 9 10 21 30 30 13 12 9 33 14 14 9 25 9 15 32 14 15 32 7 13 9 10 16 11 8 9 11 15 36 13 32 42 21 10 19 11 8 8 6 17 9 39 9 31 30 27 30 10 11 39 9 7 9 23 11 22 27 31 18 11 42 8 41 5 8 32 7 8 5 24 10 9 48 20 8 20 9 5 5 44 21 19 7 7 5 5 4 18 35 7 9 19 12 6 11 23 10 10 22 23 31 20 32 7 11 19 7 27 9 38 11 17 9 34 19 21 10 8 13 14 11 10 10 4 13 17 33 32 24 8 14 21 18 18 9 7 14 8 6 6 12 6 5 5 4 6 13 30 19 21 10	Open. Hide. 62 47 38 54 62 62 62 62 62 62 9 12 16 13 10 11 17 23 23 11 18 13 13 13 11 18 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 50 34 23 23 27 23 28 27 45 32 32 32 28 48 56 50 54 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 59 62 62 46 49 54 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 56 42 49 62 59 62 62 62 62 62 62 62 62 62 59 59 62 56 62 59 59 62 62 56 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 56 54 54 49 38 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 62 39 41 62 58 58 49 47 45 58 58 41 58 54 58 58 58 54 49 49 58 49 58 58 54 58 54 47 58 45 58 52 58 58 58 58 58 58 52 54 58 54 58 58 54 52 41 41 29 37 58 42 54 54 58 54 58 52 52 58 58 54 54 54 54 52 52 58 46 52 58 58 58 54 52 52 58 58 37 50 51 50 30 38 39 58 51 50 51 37 50 50 52 37 40 47 50 50 58 49 51 50 41 31 34 58 52 42 42 46 35 50 51 58 35 40 39 51 58 58 58 50 30 58 54 53 32 52 46 53 52 53 46 50 58 40 52 46 34 52 28 58 58 39 50 51 52 58 49 50 52 58 39 50 31 42 40 50 39 46 36 58 58 40 38 25 19 36 39 58 47 51 29 34 54 34 52 51 46 51 39 33 25 29 17 14 21 19 14 8 7 49 25 38 54 49 37 39 37 39 18 44 47 52 35 39 33 31 54 54 49 53 54 35 40 46 32 26 54 44 47 39 27 35 26 52 53 32 37 31 45 51 53 53 43 40 46 53 31 37 31 29 54 46 37 45 25 29 48 21 52 52 29 28 45 32 32 45 21 32 34 23 25 31 17 47 52 52 32 29 37 31 34 35 18 27 27 32 33 26 43 31 38 36 28 21 14 11 26 42 31 34 51 25 42 22 23 24 8 9 30 13 33 24 29 44 31 31 28 29 33 30 42 38 48 46 26 38 35 21 15 8 11 25 15 22 34 30 25 31 46 46 35 27 31 42 33 43 22 31 46 21 21 23 12 48 43 41 25 31 28 46 25 9 9 23 13 9 46 46 27 23 46 31 19 9 6 6 6 46 37 25 5 33 19 5 7 20 31 12 11 33 22 8 21 34 28 31 24 31 25 47 10 16 24 38 13 15 9 48 30 10 9 19 31 19 44 25 30 35 28 11 20 19 22 31 39 33 39 15 9 6 19 36 21 20 39 31 32 15 6 7 9 5 5 17 22 39 32 8 8 11 12 15 28 26 26 17 32 28 36 20 24 12 21 13 33 10 22 22 12 15 14 17 5 7 10 15 14 9 18 20 40 13 19 6 30 11 31 34 29 22 20 24 20 28 27 34 34 7 14 18 15 30 20 9 8 8 20 7 6 6 7 18 4 13 7 10 5 6 7 5 15 7 8 5 9 5 5 8 6 8 4 6 8 7 4 5 12 22 10 5 12 21 4 4 4 4 7 4 13 28 17 8 18 16 11 28 7 17 13 5 3 5 2 2 16 9 6 15 25 13 4 4 6 5 4 23 9 9 17 9 2 7 9 26 7 7 17 5 1 5 11 12 6 3 1 3 3 4 17 9 15 22 11 5 19 16 5 4 6 4 3 2 2 11 8 20 5 8 21 14 11 8 11 4 4 4 5 6 4 8 5 4 7 10 7 12 5 3 3 1 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_9768943_9770128
seq2: B6Ng01-200B10.g_68_1263

seq1  GAATTCCTTGAAATATTAATCTTTTATTCGTTTATCCTTCCTTTCAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAAATATTAATCTTTTATTCGTTTATCCTTCCTTTCAGGAA  50

seq1  CATTTGTAAGACATATATGCTTGAAGTTATAATATGAATTTCAAAAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTAAGACATATATGCTTGAAGTTATAATATGAATTTCAAAAACAG  100

seq1  TTCTTTTGTTCATTTTTAATTTTCTGTTTGAGAACATTATTTTGCTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTTCATTTTTAATTTTCTGTTTGAGAACATTATTTTGCTATAT  150

seq1  CATCAACTTTAAAATATTACTAGGATTACCCTAATAATTATTTAGTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTTTAAAATATTACTAGGATTACCCTAATAATTATTTAGTGATT  200

seq1  ACCCCGCTGCAAATATTAGTTTAGAGGAATTTTCTTCATTTAAGCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGCTGCAAATATTAGTTTAGAGGAATTTTCTTCATTTAAGCTTTTG  250

seq1  TTTGAGGAGGCTTTTCTTCTACAATTTTTTTTTTATATTTCAATTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGAGGCTTTTCTTCTACAATTTTTTTTTTATATTTCAATTTTTTC  300

seq1  TATATAATCTTTATTTCAAGATATATTTAAAACTCCTTTGTGTTTGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATCTTTATTTCAAGATATATTTAAAACTCCTTTGTGTTTGTTTT  350

seq1  TCCTCATAATGGTATGTATGTTCATATAGAGTAACATTTTGTTTCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATAATGGTATGTATGTTCATATAGAGTAACATTTTGTTTCTTTTC  400

seq1  ATGACACACAACTATCTCCTGGATTCTATGTATCTATATTTTATCCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACACAACTATCTCCTGGATTCTATGTATCTATATTTTATCCTTCC  450

seq1  TTGGTACTAATTACCATTGTCTTGTTTTAACTCAGTTAATGTTCTAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACTAATTACCATTGTCTTGTTTTAACTCAGTTAATGTTCTAGATT  500

seq1  AATAAATTTGAAAGACTTTGAATTTTGTATTTTAAACATCAAAGGTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTTGAAAGACTTTGAATTTTGTATTTTAAACATCAAAGGTCTGG  550

seq1  AATAAAGAAGGATTTAAGATATTTTATCTAGAAATTTTGATTTTAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAAGGATTTAAGATATTTTATCTAGAAATTTTGATTTTAAATTT  600

seq1  CACACTGAAAAATCTATAGGTTAAATAAAGACAAAATATTGGTGCAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGAAAAATCTATAGGTTAAATAAAGACAAAATATTGGTGCAGTGG  650

seq1  TAGCATACAAGCCTTACAAAGACACTGGTTCTTTGTTTCATATCTAGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATACAAGCCTTACAAAGACACTGGTTCTTTGTTTCATATCTAGGTG  700

seq1  TACAAAACCTGGTAAATATAGCAGAAACTTGTGTGGAACTGAAGTTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACCTGGTAAATATAGCAGAAACTTGTGTGGAACTGAAGTTCATT  750

seq1  CAAGGCAAATAAATTGAGGGAAAATTTGAAGAAAAGATTCATAATTTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAAATAAATTGAGGGAAAATTTGAAGAAAAGATTCATAATTTAGA  800

seq1  AATACCCACTAAGAACAAAGATAGTATAAGTCAGTATAAGTCACTGAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCACTAAGAACAAAGATAGTATAAGTCAGTATAAGTCACTGAGGC  850

seq1  AGATGAGCAGAATAACATGAAGAATGAAAATGAAGGACATGGAAAAGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCAGAATAACATGAAGAATGAAAATGAAGGACATGGAAAAGTCA  900

seq1  CATTTACTTTCTACAATTATCTTTTAAAGTATAAAATT-ATATATTATCC  949
      |||||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  CATTTACTTTCTAC-ATTATCTTTTAAAGTATAAAATTAATATATTATCC  949

seq1  TCTGTTTAGATATTTATTATTTCCATGTTTTTCTATAA--TTTTATA-TG  996
      ||||||||||||||||||||||||||| ||||||||||  ||| ||| ||
seq2  TCTGTTTAGATATTTATTATTTCCATGGTTTTCTATAAATTTTAATATTG  999

seq1  TTTTATATAATTATTTATT-GGACTTATTAT-GTATTTT-AATTTTACTA  1043
      ||||| ||||||||||||| |||||||| || ||||||| ||||||||||
seq2  TTTTAAATAATTATTTATTGGGACTTATAATGGTATTTTAAATTTTACTA  1049

seq1  TTTTAGAAAT--AAGTAATTATA-TAAATACATG-TATCAG--ATATTAT  1087
      ||||||||||  |||| | |||| | |||||||| |||| |  |||||||
seq2  TTTTAGAAATTAAAGTTACTATATTGAATACATGTTATCCGGAATATTAT  1099

seq1  --TATTTATTCCTTTTGAAAATTAGAAACAAG-AATTTTAGATAAAGTCT  1134
        |||||||||| ||   || ||||||||||| ||||| |||| ||||||
seq2  TATATTTATTCCCTT--GAAGTTAGAAACAAGAAATTTCAGAT-AAGTCT  1146

seq1  ATCCTTTCAATCTTCTTAACATATTT-TGTGTTAAGTT-ATATCTGAGAA  1182
      |||   || ||| |||| ||||||||  |||||| ||| || ||||||||
seq2  ATC--GTCCATC-TCTT-ACATATTTGGGTGTTAGGTTAATCTCTGAGAA  1192

seq1  GACA  1186
      ||||
seq2  GACA  1196

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information