BAC Information

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BAC

Clone NameB6Ng01-201C02
Chromosome6 (Build37)
Map Location 107,189,981 - 107,190,745
singlet/doubletsinglet
Overlap genenone
Upstream geneCntn4, Il5ra, Trnt1, Crbn, Ppia-ps6_1128.1
Downstream geneLrrn1, Setmar, Sumf1, LOC100043718, Itpr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201C02.g
ACCGA021992
length850
definitionB6Ng01-201C02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacttgccgactaactaatgtatagacaaacaatctataactg
gtaaggagataaatacaactaagtagaaacctatcactctgccctgcaac
ctcccccataccccgaggctccatgctgctccctcaaagtcctaactgtt
caaatgaagatgcgtttgaattgatatctcaaatggggttctttgactga
gatcaagggagatagaactgttcgttcgggttcaactgcccaagggcaca
gaatccaagatagctgtgatagcaaatggctagcctacatcttgagctga
caacaaaatctagcagcagttgtcacaacacactggctctgcagacatgc
aaaatgcaataaggaggaaaggatggaggcttgaatcccaagcttgtgtg
gcagaggtggtttcttgcaagataatcttcataggctattgtgtggagct
acaatggtaaagccaagctctaatggaggtgccataatgttcaaggtgct
atatctatgggatgtctaaaagaaagcttcatgaattcccagatttccag
gaaacctaatggcaaatttattccctgtctgttggatatgaaacacattt
aataaaagaactcaatatgatatctgatgataatgccctggataggttct
ctaacaatggatacctcacttatgtctaaggcagttgggatgcatctccc
tgaaatgtgctccatctgacatccataactttgcatatattatttacttt
gctgacgaacagtgtacagacatgcatatggggtgactagaccattctgc
cttatcaatagctgaccatgacaatttcctagatcagatttgtcaagccc

quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_107189981_107190745
seq2: B6Ng01-201C02.g_151_915

seq1  ACTCTGCACTGCAACCAGTCAGATAGCCCGAGGCTCCATGCTGCTCCCTC  50
      ||||||| ||||||||   |  ||| ||||||||||||||||||||||||
seq2  ACTCTGCCCTGCAACCTCCCCCATACCCCGAGGCTCCATGCTGCTCCCTC  50

seq1  AAAGTCCTAACTGTTCAAATGAAAATGCATTTGAATTGATATCTCAAATG  100
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  AAAGTCCTAACTGTTCAAATGAAGATGCGTTTGAATTGATATCTCAAATG  100

seq1  GGGTTCTTTGACTGAAATCAAGGGATAGAGAACTGTTCGTTCAGGTTCAA  150
      ||||||||||||||| ||||||||| | |||||||||||||| |||||||
seq2  GGGTTCTTTGACTGAGATCAAGGGAGATAGAACTGTTCGTTCGGGTTCAA  150

seq1  CTGCCCAAGGGCACAGAGTCCAATATAGCTGTGATAGCAAATGGCTAGCC  200
      ||||||||||||||||| ||||| ||||||||||||||||||||||||||
seq2  CTGCCCAAGGGCACAGAATCCAAGATAGCTGTGATAGCAAATGGCTAGCC  200

seq1  TACATCTTGAGCTGACAACAAAATCTAGCAGCAGTTGTCACAACACACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTTGAGCTGACAACAAAATCTAGCAGCAGTTGTCACAACACACTG  250

seq1  GCTCTGCAGACATGCAAAATGCAATAAGGAGGAAAGGATGGAGGCTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCAGACATGCAAAATGCAATAAGGAGGAAAGGATGGAGGCTTGAA  300

seq1  TCCCAAGCTTGTGTGGCAGAGGTGGTTTCTTGCAAGGAAATCTTCAGAGG  350
      ||||||||||||||||||||||||||||||||||||  |||||||| |||
seq2  TCCCAAGCTTGTGTGGCAGAGGTGGTTTCTTGCAAGATAATCTTCATAGG  350

seq1  CTATTGTGTGGAGCTACAAAGGTCAAGCCAAGCTCTAATGGAGGTGCCAG  400
      ||||||||||||||||||| ||| ||||||||||||||||||||||||| 
seq2  CTATTGTGTGGAGCTACAATGGTAAAGCCAAGCTCTAATGGAGGTGCCAT  400

seq1  AATGTTGAAGGTGCTAGATCTATGGGATGTCTAAAAGAAAGCTTCAGGTA  450
      |||||| ||||||||| ||||||||||||||||||||||||||||| | |
seq2  AATGTTCAAGGTGCTATATCTATGGGATGTCTAAAAGAAAGCTTCATGAA  450

seq1  TTCCCAGATTTCCAGGAAACAGAATGGCAAAGTTATTCCGTGTCTGTAGG  500
      ||||||||||||||||||||  ||||||||| ||||||| ||||||| ||
seq2  TTCCCAGATTTCCAGGAAACCTAATGGCAAATTTATTCCCTGTCTGTTGG  500

seq1  ATATGAAACACATTTAATAAGAGAAGTCATGAAGATATCTGATGATAATG  550
      |||||||||||||||||||| |||| |||  | |||||||||||||||||
seq2  ATATGAAACACATTTAATAAAAGAACTCAATATGATATCTGATGATAATG  550

seq1  CCCTGGATAGGTTCTCTAGCAATGGCTACCTCACTTATGTATAAGGGAGT  600
      |||||||||||||||||| |||||| |||||||||||||| ||||| |||
seq2  CCCTGGATAGGTTCTCTAACAATGGATACCTCACTTATGTCTAAGGCAGT  600

seq1  TGGGATGCAGCTCCCTGAGATGTGCTCCATCTGTCATCCATTACTTTGCA  650
      ||||||||| |||||||| |||||||||||||| ||||||| ||||||||
seq2  TGGGATGCATCTCCCTGAAATGTGCTCCATCTGACATCCATAACTTTGCA  650

seq1  GATATTATTTACTTTGCTGCCGAAAAGTGTACCAAGATGGTTATGGGGTC  700
       |||||||||||||||||| |||| |||||||  | |||  |||||||| 
seq2  TATATTATTTACTTTGCTGACGAACAGTGTACAGACATGCATATGGGGTG  700

seq1  TCTAGAGCATTCTGCCTAAGTAGTAAATTGGCCATGACAATTTCCTAAAT  750
       ||||| |||||||||| |  | | |  || |||||||||||||||| ||
seq2  ACTAGACCATTCTGCCTTATCAAT-AGCTGACCATGACAATTTCCTAGAT  749

seq1  CAG-TAGGTCAAGCCC  765
      ||| |  |||||||||
seq2  CAGATTTGTCAAGCCC  765