BAC Information

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BAC

Clone NameB6Ng01-202L19
Chromosome6 (Build37)
Map Location 43,713,273 - 43,714,416
singlet/doubletsinglet
Overlap geneLOC546897
Upstream geneOlfr452, Olfr451-ps1, Olfr450, Olfr449, Olfr448, Olfr447, Olfr446, GA_x5J8B7W6337-1014614-1015483, Olfr444, EG622841, Igk-V, Olfr443-ps1, GA_x5J8B7W6337-1183223-1183810, Olfr441, Olfr440-ps1, GA_x5J8B7W6337-1221999-1222591, Olfr438, Olfr437, Olfr13, GA_x5J8B7W6337-1270568-1271367, Olfr435, Olfr434, LOC665745, Olfr47, Arhgef5, Nobox, Tpk1, LOC665747
Downstream geneLOC665779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202L19.bB6Ng01-202L19.g
ACCGA023152GA023153
length1,1881,155
definitionB6Ng01-202L19.b B6Ng01-202L19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaggtttacaaagggttgtgtgacattcctcagataaatgatt
gggggggttgtgcttcccagatctggcagagaagaggaagctccactaag
aaaaggagacttccattttgcacagagttcagaggagctatccagatata
gtaacctatgactttaaatatagaggtgcaacacaagtctacagaagact
actttttgtcatgtctcctcaccctctactcccattcacaggagactaag
cagatccttgttgagcatcatgctttcttctctgctgtggatccctttac
cctccctcttagaccatcttcattcctgaatgtcagctcccaatacctag
aatcacattcaacttgaaatacccagtggccacaactagcaagatccaag
aattaattactaggcaacagccaccacagttgctaaagaaccaaagagaa
cagcataaaccaaagaactaagcacctcccaaacaaagacagaccagata
tcagcacctagaattacaatcctcccagtcccagatggatagataactgt
gtaaaaaaacacaatcaataacagccagaacaataggtctacactagagc
acagaaactctaccacaacaggccctgataattaaagcatagttgaaaca
cacacacaaaaagaccttaacaacatttattaatatgatagtggttctta
aagaagaaataaatacttcatttttaaatgatctatgaaaacaaaaaagt
ggaaaaaagtttaaaacaaatactacacagttaaaaacctgaaagtagaa
atagaatcaataaagaaaacacaagctgacagaaagctgggaatgagaaa
tttaagaactttaaccagaactacagaggcaagttgcaccaacaaaatat
gagatggaaaagagaatgtcagacactgaaaggcataatagaaaatggat
accttggtcaaaatatgttaaatctaaaaatgccctacacaaacatccag
taatataggacactatgaaagatcactattagagggctacagaacagaga
gaaacacatgtcaagcacaggaggatattcttacactaatcataaaagaa
agtttctttcacttaaaaggaattgcctcatcaattgaagatgcaagaaa
ttcaatagcctagaccagaaacttgaaatcctctcctg
gaattccaggataaggaaacactgagcacctctatgtggataccttgaat
tctttcatgttgtttttctaatggacttaatagatacttaatgcaaatta
ggatgattgtcttcagtttctctttactaacaaggctcagatgaggtttc
ccccaaagttttaggttttaattgtagaacgttataaaaaaaataaccaa
acccaaggcaaggatgagaaacaatttgaatatcagaatgtctatcttgc
aatcaagtttcacaatactgtgtagaagactctagccttttgcctagtaa
tacttcttgtctgaaacaaatgagacgcagctaactggacagcatcagct
tttctgtcttctcttttcttcccttgcttgtattacgctctttcatttgg
aatttctttatgttcataggcttgtcgacattctttctgtgtctgtgcct
ctgtttgactgtctcccacctcccgaccaccccaacaccccacacactac
aaaataagttatgtagacaaagtatgttactatgtaccttggtgggcctg
gaactccctttgtaaactatgctcccttgaagtcatagagatccatctgc
ctcccaaattctaggagtaatagtgtatgatgccatgcctgggtcaccac
accagaactggtttttgttgttgtttgttttattttttagatttatttat
tatacagtgtcctgcctgaatatatgccttcatgccagaagagggcacta
gatgtcattatagatggttatgagccacaatgttattgctgggaattaaa
ctcaggacttttggaagagtagccagtgctcttaatctctgagccatctc
tccagctctgggggttgattttattagaaaatatttcttaagttcctatt
aggcatttgttgtaaatattttcaggtaagaatataccacatttacaaca
actgatactattcttctagttacctagcttataatatatataatataata
atatatatgccagtcctcaaaggagcagcaggagaccaggtggtctattt
aatcccaatctacgagggctgggagtccctggctggcccttggccccagc
ccaccacatacctgttctcctctcggttcttaggaatagggattcccaag
gataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_43713273_43714416
seq2: B6Ng01-202L19.g_64_1218

seq1  GAATTCCAGGATAAGGAAACACTGAGCACCTCTATGTGGATACCTTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAAGGAAACACTGAGCACCTCTATGTGGATACCTTGAAT  50

seq1  TCTTTCATGTTGTTTTTCTAATGGACTTAATAGATACTTAATGCAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATGTTGTTTTTCTAATGGACTTAATAGATACTTAATGCAAATTA  100

seq1  GGATGATTGTCTTCAGTTTCTCTTTACTAACAAGGCTCAGATGAGGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATTGTCTTCAGTTTCTCTTTACTAACAAGGCTCAGATGAGGTTTC  150

seq1  CCCCAAAGTTTTAGGTTTTAATTGTAGAACGTTATAAAAAAAATAACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAGTTTTAGGTTTTAATTGTAGAACGTTATAAAAAAAATAACCAA  200

seq1  ACCCAAGGCAAGGATGAGAAACAATTTGAATATCAGAATGTCTATCTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGGCAAGGATGAGAAACAATTTGAATATCAGAATGTCTATCTTGC  250

seq1  AATCAAGTTTCACAATACTGTGTAGAAGACTCTAGCCTTTTGCCTAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGTTTCACAATACTGTGTAGAAGACTCTAGCCTTTTGCCTAGTAA  300

seq1  TACTTCTTGTCTGAAACAAATGAGACGCAGCTAACTGGACAGCATCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTGTCTGAAACAAATGAGACGCAGCTAACTGGACAGCATCAGCT  350

seq1  TTTCTGTCTTCTCTTTTCTTCCCTTGCTTGTATTACGCTCTTTCATTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCTTCTCTTTTCTTCCCTTGCTTGTATTACGCTCTTTCATTTGG  400

seq1  AATTTCTTTATGTTCATAGGCTTGTCGACATTCTTTCTGTGTCTGTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTTATGTTCATAGGCTTGTCGACATTCTTTCTGTGTCTGTGCCT  450

seq1  CTGTTTGACTGTCTCCCACCTCCCGACCACCCCAACACCCCACACACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGACTGTCTCCCACCTCCCGACCACCCCAACACCCCACACACTAC  500

seq1  AAAATAAGTTATGTAGACAAAGTATGTTACTATGTACCTTGGTGGGCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGTTATGTAGACAAAGTATGTTACTATGTACCTTGGTGGGCCTG  550

seq1  GAACTCCCTTTGTAAACTATGCTCCCTTGAAGTCATAGAGATCCATCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCCTTTGTAAACTATGCTCCCTTGAAGTCATAGAGATCCATCTGC  600

seq1  CTCCCAAATTCTAGGAGTAATAGTGTATGATGCCATGCCTGGGTCACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAATTCTAGGAGTAATAGTGTATGATGCCATGCCTGGGTCACCAC  650

seq1  ACCAGAACTGGTTTTTGTTGTTGTTTGTTTTATTTTTTAGATTTATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAACTGGTTTTTGTTGTTGTTTGTTTTATTTTTTAGATTTATTTAT  700

seq1  TATACAGTGTCCTGCCTGAATATATGCCTTCATGCCAGAAGAGGGCACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGTGTCCTGCCTGAATATATGCCTTCATGCCAGAAGAGGGCACTA  750

seq1  GATGTCATTATAGATGGTTATGAGCCACAATGTTATTGCTGGGAATTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCATTATAGATGGTTATGAGCCACAATGTTATTGCTGGGAATTAAA  800

seq1  CTCAGGACTTTTGGAAGAGTAGCCAGTGCTCTTAATCTCTGAGCCATCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGACTTTTGGAAGAGTAGCCAGTGCTCTTAATCTCTGAGCCATCTC  850

seq1  TCCAGCTCT-GGGGTTGATTTTATTAGAAAATATTTCTTAAGTTCCTATT  899
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTCTGGGGGTTGATTTTATTAGAAAATATTTCTTAAGTTCCTATT  900

seq1  AGGCATTTGTTGTAAATATTTTCAGGTAAGAAATATACCACATTTACAAC  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGGCATTTGTTGTAAATATTTTCAGGTAAG-AATATACCACATTTACAAC  949

seq1  AACTGATACTATTCTTCTAGTTAACTAGCTTAATAATAATAATAATAATA  999
      ||||||||||||||||||||||| |||||||       ||||||   |||
seq2  AACTGATACTATTCTTCTAGTTACCTAGCTT-------ATAATATATATA  992

seq1  ATAATAATAATAATAATGCCAGTCCTCAAAAGAGCAGCAGGAGA-CAG--  1046
      || |||||||||   ||||||||||||||| ||||||||||||| |||  
seq2  AT-ATAATAATATATATGCCAGTCCTCAAAGGAGCAGCAGGAGACCAGGT  1041

seq1  TGTCTATTT-ATTCAAATCTACGA-GGCTGGGAGTCC--TGCTG--CCTT  1090
       |||||||| || | ||||||||| ||||||||||||   ||||  ||||
seq2  GGTCTATTTAATCCCAATCTACGAGGGCTGGGAGTCCCTGGCTGGCCCTT  1091

seq1  -GCCCCAGC---ACACATA-CTGTT---CTCTCGGTTTCTA-GAATA-GG  1130
       ||||||||    |||||| |||||   |||||||||  || ||||| ||
seq2  GGCCCCAGCCCACCACATACCTGTTCTCCTCTCGGTTCTTAGGAATAGGG  1141

seq1  AGTTCCAAGGATAA  1144
      | | ||||||||||
seq2  ATTCCCAAGGATAA  1155