BAC Information

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BAC

Clone NameB6Ng01-202N23
Chromosome6 (Build37)
Map Location 74,683,771 - 74,812,513
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202N23.bB6Ng01-202N23.g
ACCGA023247GA023248
length9851,088
definitionB6Ng01-202N23.b B6Ng01-202N23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,811,544 - 74,812,513)(74,683,771 - 74,684,866)
sequence
gaattctttatgtattcaagttagtagtcacatgtgaggtacatgattga
aaatagttgtccaattctgtaccttacttcttggttttacaaaatgtctt
tagtttgacacattcctataatgatgtgtgtgtatgtgtttatgtgtgtg
ttcatctgtgtaggtacgcatgcacatgcatacgtgcacacccagaaaag
atttggaaggattgcgatagacatccttgagtatgtgtttcagttacttt
ccatcatgatttggttttggtttctgttttgagacaggaactctcagaga
acctggatgacaccaattctgctacagtggtggccagtgtgctccaggga
gccacctgtcacaccatgtacctgcttgcatggctgttctctggctgctg
aggatccaagggcaggtcctcatatttgtgtggatattactttgctgaat
gaatgagcattctcttctatattctgtgattgtcttgattacacatttaa
gtagattcagtaatgcctaaattaataaaaacagctttttattgtataaa
tgaaaatcttctatgtcacagctttatgtctctaatgtaataaatgcact
aattccttgatgtattgaaaagatggttgtttaattgggatgttgtgaag
ttgatatccagtagcaaattgctttttatcactattccctttggtgaata
tacaggattcaggatcctttactactattattttttttctattttctggt
tatccttatataactaatctgttctaccatgcttttcacgtagtaacaca
ctttgatttctaaaccatgcaccacttttaaatctttctcttctctaact
tgcactgatatttagtatttgtttatgtagttattctttatcccattata
taatttaaagatgtttaagaattgaaggccattattagtaattcctctca
aaatgattaactgtttgcaagtggatggaaactta

gaattcctgttgatttatttttccagaaatcattcagctttttgatgtaa
agttgacataaataaatattgttaagcttatggtagacattaaatgttta
cttttttttcgtaaacatttgagaacttaattggactcatatagctattc
atttccatcctggtttacaatgaattttttcataagaaaagtaatttgag
agacaggcacacattaaactgatacatgctaattggtcttaaaagtaaac
tgggaagagagctgcgatacctaaggaggtaaagatgcttgattcggagt
cttatatttgaattcaatctttagagcccacacagtatatgcacacgtat
acatacacactccaaatgcaaacaaaataaatcagtaaaaatgtaacaaa
tcttggttatgaggcaaacttgattttgcaatttttgtcacaactaactt
acacccacaatcctgaatttttatctaaaataaaagtcttcatctataat
caatgaaagaattaagtctttttttctttttttctaaagaggtccttatc
ttgttgtagataaatgattttttttatattacacagaatggagttgttaa
atattatcacatataaccacttaggtgtgacagcagtatgattgtttgat
cactaagatgaatagctatgtgttattttttaatattgttatctgagttt
tgacaagaatggcctcagaatttaaacattacatcaatttaggttatttc
ataatcttctgaaagattaatatacttgaagtaaaaataatttctcttta
gaacatactagaaatattaaatcaatgtgggtttttatatgggaactaaa
atatatcattgttgatttttatttctgaccagtgctaaattgaggatttt
ctatttattttaatctggtagttcataaagtgatgtatttaacacatgtt
acatattttcattataatagaattcattagcattacagtgtgacttatat
attaaatactggagtgctttattctatttatctgcagaggtatacacatg
atcaattaacgttaaggaaagtgaaacatttatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74811544_74812513
seq2: B6Ng01-202N23.b_46_1030 (reverse)

seq1  TAAGTTT-CAT-CACTTGC-AACAGTTATTCATTTTGAGAG--AATACTA  45
      ||||||| ||| ||||||| |||||||| ||||||||||||  | |||||
seq2  TAAGTTTCCATCCACTTGCAAACAGTTAATCATTTTGAGAGGAATTACTA  50

seq1  ATAAT-GCCTTC-ATTC-TAAACATCTTT-AATTATATAAT-GGAT-AAG  89
      ||||| |||||| |||| ||||||||||| ||||||||||| |||| |||
seq2  ATAATGGCCTTCAATTCTTAAACATCTTTAAATTATATAATGGGATAAAG  100

seq1  AATAACTACATAAACAAATACT-AATATCAGTGCAAGTTAGAGAAGAGAA  138
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATAACTACATAAACAAATACTAAATATCAGTGCAAGTTAGAGAAGAGAA  150

seq1  AGATTT-AAAGTGGTGCATGGTTTAGAAATCAAAGTGTGTTACTACGTGA  187
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAAAGTGGTGCATGGTTTAGAAATCAAAGTGTGTTACTACGTGA  200

seq1  AAAGCATGGTAGAACAGATTAGTTATATAAGGATAACCAGAAAATAG-AA  236
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGCATGGTAGAACAGATTAGTTATATAAGGATAACCAGAAAATAGAAA  250

seq1  AAAAATAATAGTAGT-AAGGATCCTGAATCCTGTATATTCACCAAAGGGA  285
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAAATAATAGTAGTAAAGGATCCTGAATCCTGTATATTCACCAAAGGGA  300

seq1  ATAGTGATAAAAAGCAATTTGCTACTGGATATCAACTTCACAACATCCCA  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATAAAAAGCAATTTGCTACTGGATATCAACTTCACAACATCCCA  350

seq1  ATTAAACAACCATCTTTTCAATACATCAAGGAATTAGTGCATTTATTACA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACAACCATCTTTTCAATACATCAAGGAATTAGTGCATTTATTACA  400

seq1  TTAGAGACATAAAGCTGTGACATAGAAGATTTTCATTTATACAATAAAAA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGACATAAAGCTGTGACATAGAAGATTTTCATTTATACAATAAAAA  450

seq1  GCTGTTTTTATTAATTTAGGCATTACTGAATCTACTTAAATGTGTAATCA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTTATTAATTTAGGCATTACTGAATCTACTTAAATGTGTAATCA  500

seq1  AGACAATCACAGAATATAGAAGAGAATGCTCATTCATTCAGCAAAGTAAT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATCACAGAATATAGAAGAGAATGCTCATTCATTCAGCAAAGTAAT  550

seq1  ATCCACACAAATATGAGGACCTGCCCTTGGATCCTCAGCAGCCAGAGAAC  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACACAAATATGAGGACCTGCCCTTGGATCCTCAGCAGCCAGAGAAC  600

seq1  AGCCATGCAAGCAGGTACATGGTGTGACAGGTGGCTCCCTGGAGCACACT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGCAAGCAGGTACATGGTGTGACAGGTGGCTCCCTGGAGCACACT  650

seq1  GGCCACCACTGTAGCAGAATTGGTGTCATCCAGGTTCTCTGAGAGTTCCT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCACTGTAGCAGAATTGGTGTCATCCAGGTTCTCTGAGAGTTCCT  700

seq1  GTCTCAAAACAGAAACCAAAACCAAATCATGATGGAAAGTAACTGAAACA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAAAACAGAAACCAAAACCAAATCATGATGGAAAGTAACTGAAACA  750

seq1  CATACTCAAGGATGTCTATCGCAATCCTTCCAAATCTTTTCTGGGTGTGC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCAAGGATGTCTATCGCAATCCTTCCAAATCTTTTCTGGGTGTGC  800

seq1  ACGTATGCATGTGCATGCGTACCTACACAGATGAACACACACATAAACAC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATGCATGTGCATGCGTACCTACACAGATGAACACACACATAAACAC  850

seq1  ATACACACACATCATTATAGGAATGTGTCAAACTAAAGACATTTTGTAAA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACATCATTATAGGAATGTGTCAAACTAAAGACATTTTGTAAA  900

seq1  ACCAAGAAGTAAGGTACAGAATTGGACAACTATTTTCAATCATGTACCTC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAAGTAAGGTACAGAATTGGACAACTATTTTCAATCATGTACCTC  950

seq1  ACATGTGACTACTAACTTGAATACATAAAGAATTC  970
      |||||||||||||||||||||||||||||||||||
seq2  ACATGTGACTACTAACTTGAATACATAAAGAATTC  985


seq1: chr6_74683771_74684866
seq2: B6Ng01-202N23.g_65_1152

seq1  GAATTCCTGTTGATTTATTTTTCCAGAAATCATTCAGCTTTTTGATGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTGATTTATTTTTCCAGAAATCATTCAGCTTTTTGATGTAA  50

seq1  AGTTGACATAAATAAATATTGTTAAGCTTATGGTAGACATTAAATGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACATAAATAAATATTGTTAAGCTTATGGTAGACATTAAATGTTTA  100

seq1  CTTTTTTTTCGTAAACATTTGAGAACTTAATTGGACTCATATAGCTATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTCGTAAACATTTGAGAACTTAATTGGACTCATATAGCTATTC  150

seq1  ATTTCCATCCTGGTTTACAATGAATTTTTTCATAAGAAAAGTAATTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATCCTGGTTTACAATGAATTTTTTCATAAGAAAAGTAATTTGAG  200

seq1  AGACAGGCACACATTAAACTGATACATGCTAATTGGTCTTAAAAGTAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGCACACATTAAACTGATACATGCTAATTGGTCTTAAAAGTAAAC  250

seq1  TGGGAAGAGAGCTGCGATACCTAAGGAGGTAAAGATGCTTGATTCGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAGAGCTGCGATACCTAAGGAGGTAAAGATGCTTGATTCGGAGT  300

seq1  CTTATATTTGAATTCAATCTTTAGAGCCCACACAGTATATGCACACGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTTGAATTCAATCTTTAGAGCCCACACAGTATATGCACACGTAT  350

seq1  ACATACACACTCCAAATGCAAACAAAATAAATCAGTAAAAATGTAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACACTCCAAATGCAAACAAAATAAATCAGTAAAAATGTAACAAA  400

seq1  TCTTGGTTATGAGGCAAACTTGATTTTGCAATTTTTGTCACAACTAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTATGAGGCAAACTTGATTTTGCAATTTTTGTCACAACTAACTT  450

seq1  ACACCCACAATCCTGAATTTTTATCTAAAATAAAAGTCTTCATCTATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCACAATCCTGAATTTTTATCTAAAATAAAAGTCTTCATCTATAAT  500

seq1  CAATGAAAGAATTAAGTCTTTTTTTCTTTTTTTCTAAAGAGGTCCTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAAGAATTAAGTCTTTTTTTCTTTTTTTCTAAAGAGGTCCTTATC  550

seq1  TTGTTGTAGATAAATGATTTTTTTTATATTACACAGAATGGAGTTGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTAGATAAATGATTTTTTTTATATTACACAGAATGGAGTTGTTAA  600

seq1  ATATTATCACATATAACCACTTAGGTGTGACAGCAGTATGATTGTTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATCACATATAACCACTTAGGTGTGACAGCAGTATGATTGTTTGAT  650

seq1  CACTAAGATGAATAGCTATGTGTTATTTTTTAATATTGTTATCTGAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGATGAATAGCTATGTGTTATTTTTTAATATTGTTATCTGAGTTT  700

seq1  TGACAAGAATGGCCTCAGAATTTAAACATTACATCAATTTAGGTTATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGAATGGCCTCAGAATTTAAACATTACATCAATTTAGGTTATTTC  750

seq1  ATAATCTTCTGAAAGATTAATATACTTGAAGTAAAAATAATTTCTCTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTCTGAAAGATTAATATACTTGAAGTAAAAATAATTTCTCTTTA  800

seq1  GAACATACTAGAAATATTAAATCAATGTGGGTTTTTATATGGGAACTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATACTAGAAATATTAAATCAATGTGGGTTTTTATATGGGAACTAAA  850

seq1  ATATATCATTGTTGATTTTTATTTCTGACCAGTGCTAAATTGAGGATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCATTGTTGATTTTTATTTCTGACCAGTGCTAAATTGAGGATTTT  900

seq1  CTATTTATTTTAATCTGGTAGTTCATAAAGTGATGTATTTAACACATGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATTTTAATCTGGTAGTTCATAAAGTGATGTATTTAACACATGTT  950

seq1  AACATATTTTCAATTATAATAGAAATTCATTAGCATTACAGTGTGACTTA  1000
       |||||||||| |||||||||| |||||||||||||||||||||||||||
seq2  -ACATATTTTC-ATTATAATAG-AATTCATTAGCATTACAGTGTGACTTA  997

seq1  TATTATTAAATACTGGAATTGCTTTATTCTATTTATCTGCAGAAGTATAC  1050
      || ||||||||||||| | |||||||||||||||||||||||| ||||||
seq2  TA-TATTAAATACTGG-AGTGCTTTATTCTATTTATCTGCAGAGGTATAC  1045

seq1  ACATGATTCCATTAAACCTTAAGAAAAGTGAAACATTTTATTTTTT  1096
      |||||||  || | ||| ||||| ||||||||||| ||||||||||
seq2  ACATGAT--CAATTAACGTTAAGGAAAGTGAAACA-TTTATTTTTT  1088


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