BAC Information

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BAC

Clone NameB6Ng01-202O08
Chromosome6 (Build37)
Map Location 68,008,180 - 68,008,716
singlet/doubletsinglet
Overlap geneIgk
Upstream geneE230016M11Rik, EG667310, LOC667318, Serbp1, Il12rb2, LOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r, Tacstd2, Igkv2-137, 4930515G16Rik, Igkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144, Igkv1-122, EG667435, EG434025, Igkv9-119
Downstream geneIgkv14-118-2, Igkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105, LOC384408, Gm1067, Igkv15-103, Igkv15-102, Igkv20-101-2, Igkv15-101-1, Igkv15-101, Igkv14-100, Igkv1-99, Igkv12-98, Igkv15-97, Igkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202O08.bB6Ng01-202O08.g
ACCGA023265GA023266
length9091,192
definitionB6Ng01-202O08.b B6Ng01-202O08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactgaatttttttttcttccagacgcagtcattcaagaagata
gtaattggttatatgttatatgttatatgtgctacactcagataagcttc
agaagaaacacacatacagggtgtatggaaggaaggtagcagaacaaaac
ataggactagttaaatgaaatgtattttgtctggggtgaaagttatgaag
tcacctagcaggtggaactccacaacagtctcccaaatatcggctagctg
atgcctcaggaaagaaaggagctgctgttggatgagaataaataggggag
cttacatgaacatttcgtgttcaggtatagagagaaatctgtttatttta
atgaaggtgtgtacagtaagtaaaatatccaaaatacttggcaaaatata
agtacagggttgataatgaggaacagtgatctaggggagaaacttctgtg
ggaaggaaccagcagtccatccagaggaagaggcatacccatcaatgatt
cctctgatcaccgtgaacttgggcttcatctcaaaaccattttgatttat
tggtgaggaatttgcattgttcaatgtgggcctaaattccacccttatca
gtaaggacgtgtagtcctacttagttttagaataccacagcaaccagagg
aaaggatgtgaagctgatctgaatatttttaaagtttttctgagagatgg
tgagactgagaggtttaactgatgtagagagaacttcaaactgcctattt
tagttttgagtgctgaaaaacaatgcccagagtgctaagaagagggaata
ctcggaaggctcattattcccatttttcagagatcacccaaaatgccttt
taggagttttgggcacagatctctcttaactgcttagagatgttcaaaaa
ggagatgag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaatttcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccagaggatcacacaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggttggacctggagagcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattctcaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatccccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagaaagattttattgaaa
ggacccagatgtagctatctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca
atggaagagctagagaaagaaccaaggagctaaagggatctcaaccctat
aggtggacacattatgaaccaaccagtaccccggagctcttgactcttag
ctgcatatgtatccaaaggattgtccttattcggcattcactggtaagga
gaggcccatgaccgcaacctttgtattgcccagtacagggtaacgcagtg
tctatgggggactgtggtgcctcgatgagatatagtgctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_68008180_68008716
seq2: B6Ng01-202O08.b_48_584

seq1  GAATTCTACTGAATTTTTTTTTCTTCCAGACGCAGTCATTCAAGAAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGAATTTTTTTTTCTTCCAGACGCAGTCATTCAAGAAGATA  50

seq1  GTAATTGGTTATATGTTATATGTTATATGTGCTACACTCAGATAAGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGGTTATATGTTATATGTTATATGTGCTACACTCAGATAAGCTTC  100

seq1  AGAAGAAACACACATACAGGGTGTATGGAAGGAAGGTAGCAGAACAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAACACACATACAGGGTGTATGGAAGGAAGGTAGCAGAACAAAAC  150

seq1  ATAGGACTAGTTAAATGAAATGTATTTTGTCTGGGGTGAAAGTTATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACTAGTTAAATGAAATGTATTTTGTCTGGGGTGAAAGTTATGAAG  200

seq1  TCACCTAGCAGGTGGAACTCCACAACAGTCTCCCAAATATCGGCTAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAGCAGGTGGAACTCCACAACAGTCTCCCAAATATCGGCTAGCTG  250

seq1  ATGCCTCAGGAAAGAAAGGAGCTGCTGTTGGATGAGAATAAATAGGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCAGGAAAGAAAGGAGCTGCTGTTGGATGAGAATAAATAGGGGAG  300

seq1  CTTACATGAACATTTCGTGTTCAGGTATAGAGAGAAATCTGTTTATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATGAACATTTCGTGTTCAGGTATAGAGAGAAATCTGTTTATTTTA  350

seq1  ATGAAGGTGTGTACAGTAAGTAAAATATCCAAAATACTTGGCAAAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGTGTGTACAGTAAGTAAAATATCCAAAATACTTGGCAAAATATA  400

seq1  AGTACAGGGTTGATAATGAGGAACAGTGATCTAGGGGAGAAACTTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGGGTTGATAATGAGGAACAGTGATCTAGGGGAGAAACTTCTGTG  450

seq1  GGAAGGAACCAGCAGTCCATCCAGAGGAAGAGGCATACCCATCAATGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAACCAGCAGTCCATCCAGAGGAAGAGGCATACCCATCAATGATT  500

seq1  CCTCTGATCACCGTGAACTTGGGCTTCATCTCAAAAC  537
      |||||||||||||||||||||||||||||||||||||
seq2  CCTCTGATCACCGTGAACTTGGGCTTCATCTCAAAAC  537