BAC Information

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BAC

Clone NameB6Ng01-203H22
Chromosome6 (Build37)
Map Location 74,672,595 - 74,812,513
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203H22.bB6Ng01-203H22.g
ACCGA023691GA023692
length1,0781,052
definitionB6Ng01-203H22.b B6Ng01-203H22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,672,595 - 74,673,680)(74,811,495 - 74,812,513)
sequence
gaattccttctagccttataaacttttttgaatggtaatatcaccttttc
atttgggccattatgcttgaatacattttttttcaccaaagcatgagatg
aggacttcttcatcccattctagattagccctagctttactgaagagttc
atgtgaaattttgcaattggggatgggagatagctgattttattttgttg
ttagtctctgtgtgtacacaattcactggataacatgtaggttctatttc
ttattaacctacctctccaaagttgtttgtttatacctggaaccaatgac
acagtagacttatgactgtgggaatgtagaatgtgtgtttggtcgctatt
cttggaatccatctgtactttatatagaaatcttgaaaattcactagaga
acaatatttaatactgctaggattgtaatagcatcctgatggtttaattg
acttaatattttcttttaggtttatagagtcctgcttgatttgaatgtca
gtggggaatttttcaaggattcagtttcctgaactggactagatttctgc
tgttatatatgtcacttacttataaactgagtagagaagtagaaaaacag
atggcttctgagcatccgtgttgacatactggttgtctctaatgaaggag
ctatcatatggtagttggacataaactctggttttaaacttctgcttatc
ttggtaccattgcatctttagcaagaaactgaagctactgatggcaaagt
acaaacccctcaagctttgcatgatactactactataaaggctctaaaac
atttgcagttaattaaacataaaatcaacctctaaatactaaatatttgt
ctcctctgttagagccctgttatgttagcctatgccactttgcttgtggt
ttcctctacttgggtgctatgaaagagccatgctatgtcttgacttctga
gcttctcttcatcatcctttacagttcatttcattttaaacacaaatcta
ctcagtttagcttttattttttattttttaatgtatttttattagaatat
tttctcattgcaattcacatgctatccc

gaattctttatgtattcaagttagtagtcacatgtgaggtacatgattga
aaatagttgtccaattctgtaccttacttcttggttttacaaaatgtctt
tagtttgacacattcctataatgatgtgtgtgtatgtgtttatgtgtgtg
ttcatctgtgtaggtacgcatgcacatgcatacgtgcacacccagaaaag
atttggaaggattgcgatagacatccttgagtatgtgtttcagttacttt
ccatcatgatttggttttggtttctgttttgagacaggaactctcagaga
acctggatgacaccaattctgctacagtggtggccagtgtgctccaggga
gccacctgtcacaccatgtacctgcttgcatggctgttctctggctgctg
aggatccaagggcaggtcctcatatttgtgtggatattactttgctgaat
gaatgagcattctcttctatattctgtgattgtcttgattacacatttaa
gtagattcagtaatgcctaaattaataaaaacagctttttattgtataaa
tgaaaatcttctatgtcacagctttatgtctctaatgtaataaatgcact
aattccttgatgtattgaaaagatggttgtttaattgggatgttgtgaag
ttgatatccagtagcaaattgctttttatcactattccctttggtgaata
tacaggattcaggatccttactactattatttttttctattttctggtta
tccttatataactaatctgttctaccatgcttttcacgtagtaacacact
ttgattttctaaaccattgcaccacttttaaattcttttctctttctcta
acttgcactgatatttagtattttgttttatgtagttattcttatccaat
tatataattaaaagattgtttagaatgaaaggcattatttagtattctct
caaaatgaataactgtttgcaagtgatgaaaacttaatactaataaaaaa
ttaatacattattttttgcagagaattattatatatatgattaacattct
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74672595_74673680
seq2: B6Ng01-203H22.b_45_1122

seq1  GAATTCCTTCTAGCCTTATAAACTTTTTTGAATGGTAATATCACCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTAGCCTTATAAACTTTTTTGAATGGTAATATCACCTTTTC  50

seq1  ATTTGGGCCATTATGCTTGAATACATTTTTTTTCACCAAAGCATGAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGCCATTATGCTTGAATACATTTTTTTTCACCAAAGCATGAGATG  100

seq1  AGGACTTCTTCATCCCATTCTAGATTAGCCCTAGCTTTACTGAAGAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTCTTCATCCCATTCTAGATTAGCCCTAGCTTTACTGAAGAGTTC  150

seq1  ATGTGAAATTTTGCAATTGGGGATGGGAGATAGCTGATTTTATTTTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAATTTTGCAATTGGGGATGGGAGATAGCTGATTTTATTTTGTTG  200

seq1  TTAGTCTCTGTGTGTACACAATTCACTGGATAACATGTAGGTTCTATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTCTGTGTGTACACAATTCACTGGATAACATGTAGGTTCTATTTC  250

seq1  TTATTAACCTACCTCTCCAAAGTTGTTTGTTTATACCTGGAACCAATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAACCTACCTCTCCAAAGTTGTTTGTTTATACCTGGAACCAATGAC  300

seq1  ACAGTAGACTTATGACTGTGGGAATGTAGAATGTGTGTTTGGTCGCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGACTTATGACTGTGGGAATGTAGAATGTGTGTTTGGTCGCTATT  350

seq1  CTTGGAATCCATCTGTACTTTATATAGAAATCTTGAAAATTCACTAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATCCATCTGTACTTTATATAGAAATCTTGAAAATTCACTAGAGA  400

seq1  ACAATATTTAATACTGCTAGGATTGTAATAGCATCCTGATGGTTTAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTTAATACTGCTAGGATTGTAATAGCATCCTGATGGTTTAATTG  450

seq1  ACTTAATATTTTCTTTTAGGTTTATAGAGTCCTGCTTGATTTGAATGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATATTTTCTTTTAGGTTTATAGAGTCCTGCTTGATTTGAATGTCA  500

seq1  GTGGGGAATTTTTCAAGGATTCAGTTTCCTGAACTGGACTAGATTTCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAATTTTTCAAGGATTCAGTTTCCTGAACTGGACTAGATTTCTGC  550

seq1  TGTTATATATGTCACTTACTTATAAACTGAGTAGAGAAGTAGAAAAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATATATGTCACTTACTTATAAACTGAGTAGAGAAGTAGAAAAACAG  600

seq1  ATGGCTTCTGAGCATCCGTGTTGACATACTGGTTGTCTCTAATGAAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTCTGAGCATCCGTGTTGACATACTGGTTGTCTCTAATGAAGGAG  650

seq1  CTATCATATGGTAGTTGGACATAAACTCTGGTTTTAAACTTCTGCTTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATATGGTAGTTGGACATAAACTCTGGTTTTAAACTTCTGCTTATC  700

seq1  TTGGTACCATTGCATCTTTAGCAAGAAACTGAAGCTACTGATGGCAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACCATTGCATCTTTAGCAAGAAACTGAAGCTACTGATGGCAAAGT  750

seq1  ACAAACCCCTCAAGCTTTGCATGATACTACTACTATAAAGGCTCTAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCCCTCAAGCTTTGCATGATACTACTACTATAAAGGCTCTAAAAC  800

seq1  ATTTGCAGTTAATTAAACATAAAATCAACCTCTAAATACTAAATATTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAGTTAATTAAACATAAAATCAACCTCTAAATACTAAATATTTGT  850

seq1  CTCCTCTGTTAGAGCCCTGTTATGTTAGCCTATGCCACTTTGCTTGTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGTTAGAGCCCTGTTATGTTAGCCTATGCCACTTTGCTTGTGGT  900

seq1  TTCCTCTACTTGGGTGCTATGAAAGAGCCATGCTATGTCTTGACTTCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTACTTGGGTGCTATGAAAGAGCCATGCTATGTCTTGACTTCTGA  950

seq1  GCTTCTCTTCATCATCCTTTACAGTTCATTTCATTTTAAACACAAAATTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  GCTTCTCTTCATCATCCTTTACAGTTCATTTCATTTTAAACACAAA--TC  998

seq1  TACTCAAGTTTAGCTTTTAATTTTTTAATTTTTTAATGTTAATTTTTATT  1050
      ||||| |||||||||||||  ||||| ||||||||||||  |||||||||
seq2  TACTC-AGTTTAGCTTTTA--TTTTTTATTTTTTAATGT--ATTTTTATT  1043

seq1  AG-ATATTTTCTTCATTTGCATTTCACATGCTATCCC  1086
      || |||||||| ||| ||||| |||||||||||||||
seq2  AGAATATTTTC-TCA-TTGCAATTCACATGCTATCCC  1078


seq1: chr6_74811495_74812513
seq2: B6Ng01-203H22.g_65_1107 (reverse)

seq1  TAATCATATAT---ATAATTCTGTGCAAAAA--TATGTA-TAATTTTT--  42
      |||||||||||   |||||||| ||||||||   ||||| ||||||||  
seq2  TAATCATATATATAATAATTCTCTGCAAAAAATAATGTATTAATTTTTTA  50

seq1  ATAGTATTAAG-TTTCATCACTTGC-AACAGTTATTCATTTTGAGAGAAT  90
       |||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  TTAGTATTAAGTTTTCATCACTTGCAAACAGTTATTCATTTTGAGAGAAT  100

seq1  ACT-AATAATGCC-TTCATTCTAAAC-ATC-TTTAATTATATAA-TGGAT  135
      ||| ||||||||| |||||||||||| ||| ||||||||||||| |||||
seq2  ACTAAATAATGCCTTTCATTCTAAACAATCTTTTAATTATATAATTGGAT  150

seq1  AAGAATAACTACATAAA--CAAATACT-AATATCAGTGCAAGTTAGAG-A  181
      |||||||||||||||||   ||||||| |||||||||||||||||||| |
seq2  AAGAATAACTACATAAAACAAAATACTAAATATCAGTGCAAGTTAGAGAA  200

seq1  AGAG-AAAGA--TTTAAAGTGGTGC-ATGGTTTAG-AAATCAAAGTGTGT  226
      |||| |||||  || |||||||||| ||||||||| ||||||||||||||
seq2  AGAGAAAAGAATTTAAAAGTGGTGCAATGGTTTAGAAAATCAAAGTGTGT  250

seq1  TACTACGTGAAAAGCATGGTAGAACAGATTAGTTATATAAGGATAACCAG  276
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACGTGAAAAGCATGGTAGAACAGATTAGTTATATAAGGATAACCAG  300

seq1  AAAATAGAAAAAAATAATAGTAGTAAGGATCCTGAATCCTGTATATTCAC  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAAAAAAATAATAGTAGTAAGGATCCTGAATCCTGTATATTCAC  350

seq1  CAAAGGGAATAGTGATAAAAAGCAATTTGCTACTGGATATCAACTTCACA  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGAATAGTGATAAAAAGCAATTTGCTACTGGATATCAACTTCACA  400

seq1  ACATCCCAATTAAACAACCATCTTTTCAATACATCAAGGAATTAGTGCAT  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCAATTAAACAACCATCTTTTCAATACATCAAGGAATTAGTGCAT  450

seq1  TTATTACATTAGAGACATAAAGCTGTGACATAGAAGATTTTCATTTATAC  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACATTAGAGACATAAAGCTGTGACATAGAAGATTTTCATTTATAC  500

seq1  AATAAAAAGCTGTTTTTATTAATTTAGGCATTACTGAATCTACTTAAATG  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAGCTGTTTTTATTAATTTAGGCATTACTGAATCTACTTAAATG  550

seq1  TGTAATCAAGACAATCACAGAATATAGAAGAGAATGCTCATTCATTCAGC  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCAAGACAATCACAGAATATAGAAGAGAATGCTCATTCATTCAGC  600

seq1  AAAGTAATATCCACACAAATATGAGGACCTGCCCTTGGATCCTCAGCAGC  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAATATCCACACAAATATGAGGACCTGCCCTTGGATCCTCAGCAGC  650

seq1  CAGAGAACAGCCATGCAAGCAGGTACATGGTGTGACAGGTGGCTCCCTGG  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACAGCCATGCAAGCAGGTACATGGTGTGACAGGTGGCTCCCTGG  700

seq1  AGCACACTGGCCACCACTGTAGCAGAATTGGTGTCATCCAGGTTCTCTGA  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTGGCCACCACTGTAGCAGAATTGGTGTCATCCAGGTTCTCTGA  750

seq1  GAGTTCCTGTCTCAAAACAGAAACCAAAACCAAATCATGATGGAAAGTAA  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCTGTCTCAAAACAGAAACCAAAACCAAATCATGATGGAAAGTAA  800

seq1  CTGAAACACATACTCAAGGATGTCTATCGCAATCCTTCCAAATCTTTTCT  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACACATACTCAAGGATGTCTATCGCAATCCTTCCAAATCTTTTCT  850

seq1  GGGTGTGCACGTATGCATGTGCATGCGTACCTACACAGATGAACACACAC  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGCACGTATGCATGTGCATGCGTACCTACACAGATGAACACACAC  900

seq1  ATAAACACATACACACACATCATTATAGGAATGTGTCAAACTAAAGACAT  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACACATACACACACATCATTATAGGAATGTGTCAAACTAAAGACAT  950

seq1  TTTGTAAAACCAAGAAGTAAGGTACAGAATTGGACAACTATTTTCAATCA  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAAACCAAGAAGTAAGGTACAGAATTGGACAACTATTTTCAATCA  1000

seq1  TGTACCTCACATGTGACTACTAACTTGAATACATAAAGAATTC  1019
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTCACATGTGACTACTAACTTGAATACATAAAGAATTC  1043


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