MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-204N09
Chromosome	6 (Build37)
Map Location	76,936,705 - 76,937,337
singlet/doublet	singlet
Overlap gene	Ctnna2
Upstream gene	EG546907, LOC100042952, LOC668153, EG668155, LOC100042956
Downstream gene	Lrrtm1
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG546907 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546907 MGI:3644799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100042952 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins

name	LOC668153 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668153
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins pseudo : _no_value

name	EG668155 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668155 MGI:3644000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 181 ESTs, 3 Proteins

name	LOC100042956 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Ctnna2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12386 MGI:88275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Lrrtm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74342 MGI:2389173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042952 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255217 GeneID:100042952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins product : similar to UDP-glucuronate decarboxylase 1 transcript_id : XM_001479143.1

name	EG668155 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377518 GeneID:668155 MGI:3644000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 181 ESTs, 3 Proteins product : predicted gene, EG668155 transcript_id : XM_994639.1

name	Ctnna2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753295 GeneID:12386 MGI:88275
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : catenin (cadherin associated protein), alpha 2 transcript_id : NM_009819.1

name	Ctnna2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21918868 GeneID:12386 MGI:88275
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : catenin (cadherin associated protein), alpha 2 transcript_id : NM_145732.1

name	Lrrtm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:131888340 GeneID:74342 MGI:2389173
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat transmembrane neuronal 1 transcript_id : NM_028880.3

name	LOC100042952 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255218 GeneID:100042952
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479193.1

name	EG668155 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377519 GeneID:668155 MGI:3644000
definition	codon_start : 1 product : similar to Rnf26 protein protein_id : XP_999733.1

name	Ctnna2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21918869 GeneID:12386 MGI:88275
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005912 - adherens junction [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0045296 - cadherin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0048854 - brain morphogenesis [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; cerebellar deficient folia; alpha N-catenin; alpha(N)-catenin; cadherin associated protein; catenin alpha 2 product : catenin (cadherin associated protein), alpha 2 isoform 1 protein_id : NP_663785.1

name	Ctnna2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753296 CCDS:CCDS20250.1 GeneID:12386 MGI:88275
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005912 - adherens junction [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0045296 - cadherin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0048854 - brain morphogenesis [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; cerebellar deficient folia; alpha N-catenin; alpha(N)-catenin; cadherin associated protein; catenin alpha 2 product : catenin (cadherin associated protein), alpha 2 isoform 2 protein_id : NP_033949.1

name	Lrrtm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753993 GeneID:74342 MGI:2389173
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : leucine-rich repeat transmembrane neuronal 1 protein_id : NP_083156.2

name	EG546907 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546907
definition	number : 1 pseudo : _no_value

name	LOC100042956 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042956
definition	number : 6 pseudo : _no_value

name	LOC100042956 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042956
definition	number : 5 pseudo : _no_value

name	LOC100042956 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042956
definition	number : 4 pseudo : _no_value

name	LOC100042956 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042956
definition	number : 3 pseudo : _no_value

name	LOC100042956 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042956
definition	number : 2 pseudo : _no_value

name	LOC100042956 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042956
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:130729
definition	standard_name : D6Mit187

name	(CDS detail)
type	STS
link
xref	UniSTS:109754
definition	standard_name : AU048218

name	(CDS detail)
type	STS
link
xref	UniSTS:130811
definition	standard_name : D6Mit262

name	(CDS detail)
type	STS
link
xref	UniSTS:186356
definition	standard_name : G54343

name	(CDS detail)
type	STS
link
xref	UniSTS:186351
definition	standard_name : G54336

name	(CDS detail)
type	STS
link
xref	UniSTS:130771
definition	standard_name : D6Mit225

name	(CDS detail)
type	STS
link
xref	UniSTS:186357
definition	standard_name : G54340

name	(CDS detail)
type	STS
link
xref	UniSTS:186348
definition	standard_name : G54326

name	(CDS detail)
type	STS
link
xref	UniSTS:186352
definition	standard_name : G54344

name	(CDS detail)
type	STS
link
xref	UniSTS:130751
definition	standard_name : D6Mit208

name	(CDS detail)
type	STS
link
xref	UniSTS:130910
definition	standard_name : D6Mit359

name	(CDS detail)
type	STS
link
xref	UniSTS:186350
definition	standard_name : G54335

name	(CDS detail)
type	STS
link
xref	UniSTS:186364
definition	standard_name : G54331

name	(CDS detail)
type	STS
link
xref	UniSTS:186361
definition	standard_name : G54329

name	(CDS detail)
type	STS
link
xref	UniSTS:186358
definition	standard_name : G54341

name	(CDS detail)
type	STS
link
xref	UniSTS:186362
definition	standard_name : G54330

name	(CDS detail)
type	STS
link
xref	UniSTS:186354
definition	standard_name : G54338

name	(CDS detail)
type	STS
link
xref	UniSTS:186353
definition	standard_name : G54337

name	(CDS detail)
type	STS
link
xref	UniSTS:186363
definition	standard_name : G54342

name	(CDS detail)
type	STS
link
xref	UniSTS:186349
definition	standard_name : G54334

name	(CDS detail)
type	STS
link
xref	UniSTS:125564
definition	standard_name : Results_ER_8_28_95_1___175.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:186355
definition	standard_name : G54339

name	(CDS detail)
type	STS
link
xref	UniSTS:130914
definition	standard_name : D6Mit361

name	(CDS detail)
type	STS
link
xref	UniSTS:122050
definition	standard_name : d4rat97

name	(CDS detail)
type	STS
link
xref	UniSTS:165472
definition	standard_name : AW125451

name	(CDS detail)
type	STS
link
xref	UniSTS:235472
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130731
definition	standard_name : D6Mit19

name	(CDS detail)
type	STS
link
xref	UniSTS:186359
definition	standard_name : G54327

name	(CDS detail)
type	STS
link
xref	UniSTS:130795
definition	standard_name : D6Mit246

name	(CDS detail)
type	STS
link
xref	UniSTS:186360
definition	standard_name : G54328

name	(CDS detail)
type	STS
link
xref	UniSTS:125960
definition	standard_name : mHAa23g11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:125562
definition	standard_name : Results_ER_8_28_95_1___172.seq

name	LOC668153 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255219 GeneID:668153
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins product : similar to TUBB protein pseudo : _no_value transcript_id : XR_034084.1

clone name	MSMg01-292G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059L21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-265N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517N24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-149P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540K15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-166O04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-150A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455N23
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-256E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270K13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-204N09.b	B6Ng01-204N09.g
ACC	GA024670	GA024671
length	629	922
definition	B6Ng01-204N09.b	B6Ng01-204N09.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctgattttaagtggaattaaacataggagtacttgcacagtagag gctgccaaacttaggatttgtggatctgtggaaattaaagagaataaata atcagagagcagtggagattgccagcggtttgtttccgcctggtgtggcc agctctgtccctccagccaggttctgttgggtggtgagcaccttctttag cccgaagtcacagtggagtttatctaaacaaagggcaagaaacaaaaaaa aaaaaagttacaagacgaaaaagcctgttaccttctggattttgctggtt ggcatttctttcttttgaaagagtccagctgttttcagctccattccctc cagggccagcttcttctagagagctgacagccaccactggtctagacatg actaccttctgtacttgactagcacactcactggtatgtaggctccaact ctagctctactcagatttttctatttaatttctaattaatagaaatagaa taattaatttctatttaagcttttgtttaacccatagagaagcaaaaaga gatgtgccagatatttttgatattttgatattttgattatatatatatat atatatatatatatatatgtgtgtgtgtg	gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaacaggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa gaaactcacacaatatgtattcactgataagtggatattagccccaaacc taggatacccaagatataagatataatttgctaaacacatgaaactcaag gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa caaaacacccatggaaggagtttacagagacggagtttggagctgagatg aaaggatggaccatgtagagactgccatagccaggtatccaccccataat cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa aggacgcagatgtagctgtctcttgtgagactatggccggggcccagcaa acacagtagtggtatgctcaca
quality values	Open. Hide. 52 31 18 31 62 62 47 47 38 37 62 62 47 39 47 47 54 62 49 62 51 47 54 62 62 62 62 51 62 62 62 62 30 16 18 11 24 23 45 28 21 27 28 24 27 17 45 27 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 56 50 39 44 34 46 43 45 46 50 50 50 48 34 56 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 54 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 59 62 62 62 62 59 62 62 54 59 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 56 62 54 62 62 62 59 62 62 49 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 46 46 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 59 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 47 62 62 62 62 62 62 62 62 62 62 56 56 56 56 62 62 54 62 54 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 56 56 56 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 58 36 49 49 58 58 58 58 54 58 49 58 49 52 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 45 54 54 58 58 58 58 58 54 54 58 58 58 52 54 52 41 54 54 58 58 58 54 58 54 58 54 58 58 58 50 58 58 47 58 52 58 58 50 54 53 51 58 58 58 50 58 43 37 38 58 52 58 58 51 47 50 58 25 39 41 58 43 44 54 58 58 46 58 53 51 49 50 58 54 39 58 51 58 58 58 58 58 54 58 46 39 53 58 58 58 58 51 58 58 58 49 49 49 58 44 43 49 58 58 58 43 43 41 54 54 44 43 51 28 39 41 39 30 37 10 18 5 8 4 5	Open. Hide. 46 36 35 38 62 62 62 47 50 47 62 38 22 16 7 20 18 18 37 32 21 21 21 21 27 32 56 43 56 62 59 59 59 59 62 62 62 62 59 62 62 62 46 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 51 50 45 40 46 50 56 59 56 56 48 46 46 54 54 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 56 62 59 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 46 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 56 56 62 56 56 56 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 51 51 56 32 36 56 56 62 62 62 62 51 56 56 56 47 56 62 62 62 56 62 56 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 47 62 62 62 54 62 62 62 62 62 62 54 62 47 39 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 39 62 62 52 52 54 62 54 47 62 62 62 62 62 51 62 58 58 42 58 52 48 58 58 45 54 54 58 58 54 54 58 58 58 58 58 58 58 54 54 58 58 54 48 48 48 41 42 49 44 54 58 54 33 58 58 58 49 58 58 58 54 54 58 58 58 48 49 54 47 26 41 45 54 54 43 54 54 52 45 37 52 54 52 54 52 52 52 58 42 54 46 58 54 58 42 58 54 54 52 40 48 25 49 38 36 33 39 53 39 49 54 58 50 58 51 42 46 58 48 50 50 54 46 46 54 58 32 45 49 54 51 50 50 52 58 51 33 58 40 28 58 48 40 29 44 34 52 58 32 49 50 45 58 52 58 46 52 35 46 49 51 41 51 52 39 52 50 41 40 33 26 11 20 33 32 53 40 58 58 54 58 50 36 41 37 13 51 54 41 50 40 41 41 37 33 50 50 58 51 44 21 26 46 18 13 50 18 32 33 37 42 58 32 49 33 10 51 39 23 38 52 35 54 21 51 31 49 53 40 33 13 32 35 47 49 54 39 31 49 21 21 54 47 31 24 32 21 32 54 40 32 24 54 40 32 32 33 54 30 25 20 37 38 19 34 30 30 33 54 40 37 31 31 54 31 45 54 54 39 32 33 18 52 31 29 35 29 30 31 40 45 40 45 52 32 32 32 34 32 45 35 31 23 31 28 12 22 20 34 31 26 32 22 37 33 29 17 26 26 30 23 30 30 30 22 51 51 45 30 33 31 31 28 46 45 30 32 31 22 20 29 32 15 15 13 32 41 27 33 14 25 32 15 22 7 30 33 28 30 31 21 25 32 31 24 34 31 37 15 10 21 31 14 30 36 20 8 40 29 21 12 16 13 13 7 21 25 27 6 8 7 13 8 11 6 41 6 31 13 29 23 21 8 9 10 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_76936705_76937337
seq2: B6Ng01-204N09.b_44_672 (reverse)

seq1  CACACACACACACATATATATATATATATATATATATATATATATAATCA  50
          |||||||||| |||||||||||||||||||||||||||||||||||
seq2  ----CACACACACACATATATATATATATATATATATATATATATAATCA  46

seq1  AAATATCAAAATATCAAAAATATCTGGCACATCTCTTTTTGCTTCTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAAAATATCAAAAATATCTGGCACATCTCTTTTTGCTTCTCTAT  96

seq1  GGGTTAAACAAAAGCTTAAATAGAAATTAATTATTCTATTTCTATTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAACAAAAGCTTAAATAGAAATTAATTATTCTATTTCTATTAATT  146

seq1  AGAAATTAAATAGAAAAATCTGAGTAGAGCTAGAGTTGGAGCCTACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAAATAGAAAAATCTGAGTAGAGCTAGAGTTGGAGCCTACATAC  196

seq1  CAGTGAGTGTGCTAGTCAAGTACAGAAGGTAGTCATGTCTAGACCAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTGTGCTAGTCAAGTACAGAAGGTAGTCATGTCTAGACCAGTGG  246

seq1  TGGCTGTCAGCTCTCTAGAAGAAGCTGGCCCTGGAGGGAATGGAGCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCAGCTCTCTAGAAGAAGCTGGCCCTGGAGGGAATGGAGCTGAA  296

seq1  AACAGCTGGACTCTTTCAAAAGAAAGAAATGCCAACCAGCAAAATCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTGGACTCTTTCAAAAGAAAGAAATGCCAACCAGCAAAATCCAGA  346

seq1  AGGTAACAGGCTTTTTCGTCTTGTAACTTTTTTTTTTTTTGTTTCTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACAGGCTTTTTCGTCTTGTAACTTTTTTTTTTTTTGTTTCTTGCC  396

seq1  CTTTGTTTAGATAAACTCCACTGTGACTTCGGGCTAAAGAAGGTGCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTAGATAAACTCCACTGTGACTTCGGGCTAAAGAAGGTGCTCAC  446

seq1  CACCCAACAGAACCTGGCTGGAGGGACAGAGCTGGCCACACCAGGCGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAACAGAACCTGGCTGGAGGGACAGAGCTGGCCACACCAGGCGGAA  496

seq1  ACAAACCGCTGGCAATCTCCACTGCTCTCTGATTATTTATTCTCTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCGCTGGCAATCTCCACTGCTCTCTGATTATTTATTCTCTTTAAT  546

seq1  TTCCACAGATCCACAAATCCTAAGTTTGGCAGCCTCTACTGTGCAAGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGATCCACAAATCCTAAGTTTGGCAGCCTCTACTGTGCAAGTAC  596

seq1  TCCTATGTTTAATTCCACTTAAAATCAGAATTC  633
      |||||||||||||||||||||||||||||||||
seq2  TCCTATGTTTAATTCCACTTAAAATCAGAATTC  629

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information