BAC Information

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BAC

Clone NameB6Ng01-206B14
Chromosome6 (Build37)
Map Location 32,225,929 - 32,422,768
singlet/doubletdoublet
Overlap genePlxna4
Upstream geneMkln1, Podxl, EG619959, LOC620104, 1700012A03Rik
Downstream geneChchd3, LOC100039118, Gm1401, Exoc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206B14.bB6Ng01-206B14.g
ACCGA025602GA025603
length1,1391,005
definitionB6Ng01-206B14.b B6Ng01-206B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,421,637 - 32,422,768)(32,225,929 - 32,226,926)
sequence
gaattccatgcaccctgcagaaaatgaggtctcattcatggccattatca
tttgagtcgctgagaaaaaggtcgagttggcaagtgcatcacttttttca
tcagatctccagggacatactcatacatttgagtggcaggctctagctgg
ctgagccgtgctgtgtgattgagggccacgggtctcattcaccttgcaga
taaggaattcaactgagagacgatgctccctgactcaagcttgggcatgg
gactggcacacctatgggtacccatgatcaaatcctctcagctcaggtca
gatgacatttcacggtgtggcaggtacactttgttaggagcatgatcaga
agaggagcatgatgatgaaaggccttcgttttctagatggttctctgttc
tctcctaaatctcccatattcttgcttcccgtataaccctctcagggtaa
ggcagagcagactcttcctgaatctattcccattgtcatcgtttgcatct
cagcaccacgtgtattgctatttttatcctgtactagaaactattaagtg
ggggagaaatgttaattggtattattacagcaaactgtgtcctagtaaca
ttgaattcagaggtaagtttccccaccccctcccctgccttttaggcata
tacaaggattttattcattttgctgacagccagcacagatttctttcttt
ctttctttttcttttttttttcccccttctagtgctgtgcctcttgggag
aggtattcagacctctgacacatacagggcaagttgctgggcctccgttc
tgagttctgcttagatacaggagaaagaagtggggatggagggaattgcc
ctgactttaagtgcagttttaactactgaaagtagaccagaaaggaacag
ccctggctgtgtgggatgcacaacatgcttgtgtggctcactgggccctt
cgcgagagatcctgggctgtgtgtggttttttgttttattatgggtagca
gtaagggatttcaacctttgagcctatgcttatggaggtatgtgctctac
ctctgagctacatccctagctctagctactgcattatgggtctagctgaa
aaaggtaccagggaccttcaaggtagtatcctccctaag

gaattccaggacagtgagagaccctgttgcaaagaaaaaggtggcctgta
actgagaaatgacacttggggctgtgccctggaataagtttcacacacat
ctagtcagatattgggggcagccatgaacaagtgaccatcctcgggtcat
catggaggtgcagttgcagcttgtatgtttatgagaggcatttgatggag
ctaaagaagtaatgagtacagtccaggggaacattgccctctttggccat
caatcactcccaagtttcagacagcttgtacctggcagggatgagggtgg
ggggagtacccatcttacagcttggccactgaaccacagcatctggccgt
tcactagtctggacacgcacgcatgccccagtgttcctgggggaggtttt
ccacagtggtggccttctgggagacagtgtggtgaaacaagagaccacct
tacctccccagaaatgccttgagatgtatttaatacactgtagttggcct
gtcttagaatacgtgcatcttggagctcgagtcgttgcaatgagggaaaa
cagcactttaaatgcacagttggtcctttgtttctgtgggttctacagcc
aaccaactttagaccagaaatagtaaatcaactctatctttagtaagcgt
gtgcagaatttctcttgcatttctatggcattagatattgtaagccttgt
agaaatgatttaaaatatgcaggggtagctgtataagctatacgaagata
ctaccctgttttatagaaaagagttgaggacctacagattcgctatgcgc
tggggcttctggaaccaatcagacaggtatactgggaacaactatattag
gagaacaaatacaaacagttgagcagattataccttaactccctaagaac
ttgctgcagacaccataatcaagcacaagaaaagcttggagtcctctgtg
cctgatctggaaagctacaatcctggcttccctttctcctcatttctcta
gaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_32421637_32422768
seq2: B6Ng01-206B14.b_50_1188 (reverse)

seq1  CTTAGGGGGAATACTACCTTGAAGGTTCCTTGTTACCTATTTCAGCTAGA  50
      ||||||| | ||||||||||||||| ||| || ||||| |||||||||||
seq2  CTTAGGGAGGATACTACCTTGAAGG-TCCCTGGTACCTTTTTCAGCTAGA  49

seq1  CCATAAATGCAAGTAGCCTAGGAGCTAGGGATGTAGCTCAGAGGTAGAGC  100
      ||   ||||| ||||| ||| |||||||||||||||||||||||||||||
seq2  CCCATAATGC-AGTAG-CTA-GAGCTAGGGATGTAGCTCAGAGGTAGAGC  96

seq1  ACATACCT-CAT-AGCATAAGGCTC-AAGGTTGAAATCCC-TACTGCTA-  145
      |||||||| ||| ||||| |||||| |||||||||||||| |||||||| 
seq2  ACATACCTCCATAAGCAT-AGGCTCAAAGGTTGAAATCCCTTACTGCTAC  145

seq1  CCAAAATAAA--CAAAAACCACACACAGCCCAGAATCTCTCGCGAA-GGC  192
      ||| ||||||   |||||||||||||||||||| |||||||||||| |||
seq2  CCATAATAAAACAAAAAACCACACACAGCCCAGGATCTCTCGCGAAGGGC  195

seq1  CCAGTGAGCCACAC-AGCATG-TGTGCATCCCACACAGCCA-GGCTGTTC  239
      |||||||||||||| |||||| ||||||||||||||||||| ||||||||
seq2  CCAGTGAGCCACACAAGCATGTTGTGCATCCCACACAGCCAGGGCTGTTC  245

seq1  C-TTCTGGTCTACTTTCAGTAGTTAAAACTGCACTTAAAGTCAGGGCAAT  288
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGTCTACTTTCAGTAGTTAAAACTGCACTTAAAGTCAGGGCAAT  295

seq1  TCCCTCCATCCCCACTTCTTTCTCCTGTATCTAAGCAGAACTCAGAACGG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCATCCCCACTTCTTTCTCCTGTATCTAAGCAGAACTCAGAACGG  345

seq1  AGGCCCAGCAACTTGCCCTGTATGTGTCAGAGGTCTGAATACCTCTCCCA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGCAACTTGCCCTGTATGTGTCAGAGGTCTGAATACCTCTCCCA  395

seq1  AGAGGCACAGCACTAGAAGGGGGAAAAAAAAAAGAAAAAGAAAGAAAGAA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCACAGCACTAGAAGGGGGAAAAAAAAAAGAAAAAGAAAGAAAGAA  445

seq1  AGAAATCTGTGCTGGCTGTCAGCAAAATGAATAAAATCCTTGTATATGCC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGTGCTGGCTGTCAGCAAAATGAATAAAATCCTTGTATATGCC  495

seq1  TAAAAGGCAGGGGAGGGGGTGGGGAAACTTACCTCTGAATTCAATGTTAC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGCAGGGGAGGGGGTGGGGAAACTTACCTCTGAATTCAATGTTAC  545

seq1  TAGGACACAGTTTGCTGTAATAATACCAATTAACATTTCTCCCCCACTTA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACACAGTTTGCTGTAATAATACCAATTAACATTTCTCCCCCACTTA  595

seq1  ATAGTTTCTAGTACAGGATAAAAATAGCAATACACGTGGTGCTGAGATGC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTCTAGTACAGGATAAAAATAGCAATACACGTGGTGCTGAGATGC  645

seq1  AAACGATGACAATGGGAATAGATTCAGGAAGAGTCTGCTCTGCCTTACCC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGATGACAATGGGAATAGATTCAGGAAGAGTCTGCTCTGCCTTACCC  695

seq1  TGAGAGGGTTATACGGGAAGCAAGAATATGGGAGATTTAGGAGAGAACAG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGGTTATACGGGAAGCAAGAATATGGGAGATTTAGGAGAGAACAG  745

seq1  AGAACCATCTAGAAAACGAAGGCCTTTCATCATCATGCTCCTCTTCTGAT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCATCTAGAAAACGAAGGCCTTTCATCATCATGCTCCTCTTCTGAT  795

seq1  CATGCTCCTAACAAAGTGTACCTGCCACACCGTGAAATGTCATCTGACCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCCTAACAAAGTGTACCTGCCACACCGTGAAATGTCATCTGACCT  845

seq1  GAGCTGAGAGGATTTGATCATGGGTACCCATAGGTGTGCCAGTCCCATGC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAGAGGATTTGATCATGGGTACCCATAGGTGTGCCAGTCCCATGC  895

seq1  CCAAGCTTGAGTCAGGGAGCATCGTCTCTCAGTTGAATTCCTTATCTGCA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTTGAGTCAGGGAGCATCGTCTCTCAGTTGAATTCCTTATCTGCA  945

seq1  AGGTGAATGAGACCCGTGGCCCTCAATCACACAGCACGGCTCAGCCAGCT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAATGAGACCCGTGGCCCTCAATCACACAGCACGGCTCAGCCAGCT  995

seq1  AGAGCCTGCCACTCAAATGTATGAGTATGTCCCTGGAGATCTGATGAAAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGCCACTCAAATGTATGAGTATGTCCCTGGAGATCTGATGAAAA  1045

seq1  AAGTGATGCACTTGCCAACTCGACCTTTTTCTCAGCGACTCAAATGATAA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATGCACTTGCCAACTCGACCTTTTTCTCAGCGACTCAAATGATAA  1095

seq1  TGGCCATGAATGAGACCTCATTTTCTGCAGGGTGCATGGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCATGAATGAGACCTCATTTTCTGCAGGGTGCATGGAATTC  1139


seq1: chr6_32225929_32226926
seq2: B6Ng01-206B14.g_71_1075

seq1  GAATTCCAGGACAGTGAGAGACCCTGTTGCAAAGAAAAAGGTGGCCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGTGAGAGACCCTGTTGCAAAGAAAAAGGTGGCCTGTA  50

seq1  ACTGAGAAATGACACTTGGGGCTGTGCCCTGGAATAAGTTTCACACACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAAATGACACTTGGGGCTGTGCCCTGGAATAAGTTTCACACACAT  100

seq1  CTAGTCAGATATTGGGGGCAGCCATGAACAAGTGACCATCCTCGGGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCAGATATTGGGGGCAGCCATGAACAAGTGACCATCCTCGGGTCAT  150

seq1  CATGGAGGTGCAGTTGCAGCTTGTATGTTTATGAGAGGCATTTGATGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGTGCAGTTGCAGCTTGTATGTTTATGAGAGGCATTTGATGGAG  200

seq1  CTAAAGAAGTAATGAGTACAGTCCAGGGGAACATTGCCCTCTTTGGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAAGTAATGAGTACAGTCCAGGGGAACATTGCCCTCTTTGGCCAT  250

seq1  CAATCACTCCCAAGTTTCAGACAGCTTGTACCTGGCAGGGATGAGGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACTCCCAAGTTTCAGACAGCTTGTACCTGGCAGGGATGAGGGTGG  300

seq1  GGGGAGTACCCATCTTACAGCTTGGCCACTGAACCACAGCATCTGGCCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTACCCATCTTACAGCTTGGCCACTGAACCACAGCATCTGGCCGT  350

seq1  TCACTAGTCTGGACACGCACGCATGCCCCAGTGTTCCTGGGGGAGGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGTCTGGACACGCACGCATGCCCCAGTGTTCCTGGGGGAGGTTTT  400

seq1  CCACAGTGGTGGCCTTCTGGGAGACAGTGTGGTGAAACAAGAGACCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGGTGGCCTTCTGGGAGACAGTGTGGTGAAACAAGAGACCACCT  450

seq1  TACCTCCCCAGAAATGCCTTGAGATGTATTTAATACACTGTAGTTGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCCAGAAATGCCTTGAGATGTATTTAATACACTGTAGTTGGCCT  500

seq1  GTCTTAGAATACGTGCATCTTGGAGCTCGAGTCGTTGCAATGAGGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGAATACGTGCATCTTGGAGCTCGAGTCGTTGCAATGAGGGAAAA  550

seq1  CAGCACTTTAAATGCACAGTTGGTCCTTTGTTTCTGTGGGTTCTACAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTTAAATGCACAGTTGGTCCTTTGTTTCTGTGGGTTCTACAGCC  600

seq1  AACCAACTTTAGACCAGAAATAGTAAATCAACTCTATCTTTAGTAAGCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACTTTAGACCAGAAATAGTAAATCAACTCTATCTTTAGTAAGCGT  650

seq1  GTGCAGAATTTCTCTTGCATTTCTATGGCATTAGATATTGTAAGCCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGAATTTCTCTTGCATTTCTATGGCATTAGATATTGTAAGCCTTGT  700

seq1  AGAAATGATTTAAAATATGCAGGGGTAGCTGTATAAGCTATACGAAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGATTTAAAATATGCAGGGGTAGCTGTATAAGCTATACGAAGATA  750

seq1  CTACCCTGTTTTATAGAAAAGAGTTGAGGACCTACAGATTCGCTATGCGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTGTTTTATAGAAAAGAGTTGAGGACCTACAGATTCGCTATGCGC  800

seq1  TGGGGCTTCTGGAACCAATCAGACAGGTATACTGGG-ACAACTATATTAG  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGGGCTTCTGGAACCAATCAGACAGGTATACTGGGAACAACTATATTAG  850

seq1  GAGAACAAATACAAACAGTTGAGCAGATTATACCTTAACTCCCTAAGAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAAATACAAACAGTTGAGCAGATTATACCTTAACTCCCTAAGAAC  900

seq1  TTGCTGCAGACACCATAATCAGGCACAGGAAAAGCTTTGGAGT-CTCTGT  948
      ||||||||||||||||||||| ||||| ||||||| ||||||| ||||||
seq2  TTGCTGCAGACACCATAATCAAGCACAAGAAAAGC-TTGGAGTCCTCTGT  949

seq1  G-CTGATCT-GAAAGCTACAAT-CTGGCTT-CCTTTCT-CTCATTTC-CT  992
      | ||||||| |||||||||||| ||||||| ||||||| |||||||| ||
seq2  GCCTGATCTGGAAAGCTACAATCCTGGCTTCCCTTTCTCCTCATTTCTCT  999

seq1  AGAAAG  998
      ||||||
seq2  AGAAAG  1005


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