BAC Information

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BAC

Clone NameB6Ng01-207N10
Chromosome6 (Build37)
Map Location 78,975,768 - 78,976,830
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668169, EG434050, Pap, Reg3d, Reg3a, Reg2, Reg1, Reg3g, LOC621716, Ppia-ps6_789.1
Downstream geneLOC384440, LOC621815, LOC100043392, Lrrtm4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207N10.bB6Ng01-207N10.g
ACCGA026880GA026881
length1,1071,090
definitionB6Ng01-207N10.b B6Ng01-207N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcaattcttgatcttacagcacaacctttgctgttc
tattcaggaatttttcccctgtacaatatcttcgaggcttttccctactt
tctcctgtataagtttcagtgtctctggttttatgtggagttccttaatc
cacttagatttgaccttagtacaaggagatagaaatggatcaattcgcat
tcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatgc
tgtctttcttccactggatgattttagctcccttgtcgaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattggtc
tacttgtctgtcactataccagtaccatacagttttgatcacaattgctc
tgtagtatagttttaggtccggcatggtgattctaccagaggttctttta
tccttgagaaaagtttttgctatcctcggttttttgttattccagatgaa
tctgccgattgccatttctaattcgttgaagaattgagttggaattttga
tgggggattgcattgaatctgtcgattgcttttggcaagctagacatttt
tttcaatgttgatcctgtcaatgcatgagcatgggacatcttttccatct
tctgagatcttcctttaattttctttctttagagacttgaagttcttatc
atagagatctttcaattccatagttttgactcaggccaaggtatttatat
taattgtgactattgagaagggtgttgttcctaattcttcctcagcctgt
ttatcctttgtgtacagaaaaggccatgaacttgtttgagtaaatttata
tatcagctactttcattgagcgttttatcaggctttaggagtttcctctg
ggtgaat
gaattcaccttggcttctaaagaacgttttgctgaggggatttgctgtgt
tgacaatttttgtatcacttgaaaaaattctatgccacttccctcaggac
cacaaagcatctaatgagaaggcagctgtcacttgaagtgtacaaatgta
gtgagaagcatgaaatcatgtcttactggctgcttgtagggcattttctc
tcgttttcagttgtctgtgggcaagaacttgtctgagtgtgtctatttga
gttgactctataagttggtgactttgcggggagctcctgtgaagctagag
ttataggtagttctgagccacctagcaggtatggtctgaagtgaatttag
atcacctggaagagcaaaaagtactcttaactgctgtcaccttctaaaat
tctggcaacacagaacttatttactttgtatgtcaccataatccttcaag
attatgtactttcctaaccaggttcttcactgttgttcatataaggcaat
tgatattaatctgtcttcaaagttgttgattaaatcctttgttattggca
cctttatttgagcttaggctataagatacttgtaattagtttgttactta
tatttgtgtgtaagtgtacatattcatgtgtttgcatatacaagagtgaa
tatacacctgtatgtgcagatctgtggtgaatgtaggtgaactctggtta
taattttccattactctctaccttactttttgaaataggatctctcacta
aatgtcttgctcattaatttggttatgttagtagccagaaataccacagg
gagcaacctgcaccttcctcccttagcagcagggtttataagtacacaac
tttcatgccaggtttccatgtgtattacagagattcaaacttcgtcttca
cattttgcatgacaggcacttttatcaattggattatctccacaagcctc
aaacaattaaatcaagaaaaacctttcaaagatgtggtggtgcctgttta
gttttagttgattaacggattatgattcaagaggacaacctagatttagg
ccatcattgaagaatttactaaacctcatccaaatcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_78975768_78976830
seq2: B6Ng01-207N10.g_69_1158

seq1  GAATTCACCTTGGCTTCTAAAGAACGTTTTGCTGAGGGGATTTGCTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTGGCTTCTAAAGAACGTTTTGCTGAGGGGATTTGCTGTGT  50

seq1  TGACAATTTTTGTATCACTTGAAAAAATTCTATGCCACTTCCCTCAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTTTTGTATCACTTGAAAAAATTCTATGCCACTTCCCTCAGGAC  100

seq1  CACAAAGCATCTAATGAGAAGGCAGCTGTCACTTGAAGTGTACAAATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCATCTAATGAGAAGGCAGCTGTCACTTGAAGTGTACAAATGTA  150

seq1  GTGAGAAGCATGAAATCATGTCTTACTGGCTGCTTGTAGGGCATTTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAGCATGAAATCATGTCTTACTGGCTGCTTGTAGGGCATTTTCTC  200

seq1  TCGTTTTCAGTTGTCTGTGGGCAAGAACTTGTCTGAGTGTGTCTATTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTCAGTTGTCTGTGGGCAAGAACTTGTCTGAGTGTGTCTATTTGA  250

seq1  GTTGACTCTATAAGTTGGTGACTTTGCGGGGAGCTCCTGTGAAGCTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTCTATAAGTTGGTGACTTTGCGGGGAGCTCCTGTGAAGCTAGAG  300

seq1  TTATAGGTAGTTCTGAGCCACCTAGCAGGTATGGTCTGAAGTGAATTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGTAGTTCTGAGCCACCTAGCAGGTATGGTCTGAAGTGAATTTAG  350

seq1  ATCACCTGGAAGAGCAAAAAGTACTCTTAACTGCTGTCACCTTCTAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTGGAAGAGCAAAAAGTACTCTTAACTGCTGTCACCTTCTAAAAT  400

seq1  TCTGGCAACACAGAACTTATTTACTTTGTATGTCACCATAATCCTTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAACACAGAACTTATTTACTTTGTATGTCACCATAATCCTTCAAG  450

seq1  ATTATGTACTTTCCTAACCAGGTTCTTCACTGTTGTTCATATAAGGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTACTTTCCTAACCAGGTTCTTCACTGTTGTTCATATAAGGCAAT  500

seq1  TGATATTAATCTGTCTTCAAAGTTGTTGATTAAATCCTTTGTTATTGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTAATCTGTCTTCAAAGTTGTTGATTAAATCCTTTGTTATTGGCA  550

seq1  CCTTTATTTGAGCTTAGGCTATAAGATACTTGTAATTAGTTTGTTACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTTGAGCTTAGGCTATAAGATACTTGTAATTAGTTTGTTACTTA  600

seq1  TATTTGTGTGTAAGTGTACATATTCATGTGTTTGCATATACAAGAGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTGTGTAAGTGTACATATTCATGTGTTTGCATATACAAGAGTGAA  650

seq1  TATACACCTGTATGTGCAGATCTGTGGTGAATGTAGGTGAACTCTGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACCTGTATGTGCAGATCTGTGGTGAATGTAGGTGAACTCTGGTTA  700

seq1  TAATTTTCCATTACTCTCTACCTTACTTTTTGAAATAGGATCTCTCACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCCATTACTCTCTACCTTACTTTTTGAAATAGGATCTCTCACTA  750

seq1  AATGTCTTGCTCATTAATTTGGTTATGTTAGTAGCCAGAAA-ACCACAGG  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATGTCTTGCTCATTAATTTGGTTATGTTAGTAGCCAGAAATACCACAGG  800

seq1  GAGCAACCTGCACCTTCCT-CCTTAGCAGCAGGG-TTATAAGTACACAAC  847
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  GAGCAACCTGCACCTTCCTCCCTTAGCAGCAGGGTTTATAAGTACACAAC  850

seq1  -TTCATGCCAGGTTTCCATGTGTATTACAGAGATTCAAAC-TCGTCTTCA  895
       ||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTCATGCCAGGTTTCCATGTGTATTACAGAGATTCAAACTTCGTCTTCA  900

seq1  CA-TTTGCATGACAGGCAC-TTTATCAATTGGATTATCTCCACAAGCCTC  943
      || |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CATTTTGCATGACAGGCACTTTTATCAATTGGATTATCTCCACAAGCCTC  950

seq1  AAACAATTAAATCAAG-AAAACCTTTCAAAGATGTG--TGTGGCTGTTTA  990
      |||||||||||||||| |||||||||||||||||||   ||| |||||||
seq2  AAACAATTAAATCAAGAAAAACCTTTCAAAGATGTGGTGGTGCCTGTTTA  1000

seq1  GTTTTAGTTGATT-ACAGA-TATGA-TCAAGAGGACAACTAAGATT--AG  1035
      ||||||||||||| || || ||||| |||||||||||||  |||||   |
seq2  GTTTTAGTTGATTAACGGATTATGATTCAAGAGGACAACCTAGATTTAGG  1050

seq1  CCATCA-TGAAGAATTTA-----------TCAAATCTTCA  1063
      |||||| |||||||||||            ||||||||||
seq2  CCATCATTGAAGAATTTACTAAACCTCATCCAAATCTTCA  1090