BAC Information

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BAC

Clone NameB6Ng01-207O11
Chromosome6 (Build37)
Map Location 16,245,371 - 16,246,134
singlet/doubletsinglet
Overlap genenone
Upstream geneFoxp2, Mdfic, LOC100041116
Downstream geneTcfec, EG435881, Tes, EG232599, Cav2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207O11.bB6Ng01-207O11.g
ACCGA026927GA026928
length7641,178
definitionB6Ng01-207O11.b B6Ng01-207O11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttagcagtttgtgttaaaacaagacccttgcaaccatgtac
tcttaggaaattaatatttacatctaggcaaaatatgtacagggacattc
atagttgtatttatagcagtcaagaatgggaaaatatctgaatgctttca
gtgggtgaaaaacaaaaaattggtatgcatgatatggtatgatggattcc
atgtggtatgttccacaccaaaactcacagtggcgtttgatcccagagaa
gtcttgaagagtcggaatctcttgaagagatgatgcctaataggagagga
ccatgctgttgtagttactactgttagaatggattaatgcctgccagtgc
tctaagaatggttgagattttgaggggctggattagggaatagaagaatg
gactctcagaaggttaaattaagctttctggctttacactgtgctctgct
cttgatgggtgatctctctgtagtatgtactcctactatgtgatgctatt
taccactttgtgatgtacccagggactccttaccatgtcagagtgtagca
aactaaaaggactaatgtgtaataaggcaactcagaaaataaacaaatat
gttaacaacatatacaacaaaggggattctctagagaattatgttgagtg
ttaaaagcctgtttcaaaaacagaattctgtatgactctgtttgtacaca
gtattacagtattatgtcaggtttttacatagtattatgccagggaggga
gggagggagagaga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaccaatcctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
acatgctggcgaggatgtggataaagaggaacacttctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
aaaaattggacatagtactaccggaggatcctgcaatacctctcctcggc
atatatccagaagatgttccaaccggtaagaagggcacatgctccactat
gttcatagcagctttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggaggatatcatcctgagtggagtaacccaatcacaaag
gaactcgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaacacatgaaattcaag
aagaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaa
caaaacacccatggaaggagttacagagacaaaatttggagctgtgacga
aaggatggatcatctagtgattgccatatgcagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
agacccagatatagctctctcttgtgagactttgccggggccctagcaaa
cacagaagtggatgatcacagtcagctattggaatgggtcacacggcccc
caaatggtggagctagagaaattacccaaggagctaaagggaactgccaa
ccctataggtggtaacaaccattatgaacttacccagtaccgggagcctc
ttgtcttttagctgcataatgtattcaaaagatgtctagtccggcccatc
actgtagaagtccattgaacttgcactaatggcccagtataggacgtcag
tatcaaaaggcgtataagtgtgttgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_16245371_16246134
seq2: B6Ng01-207O11.b_48_811

seq1  GAATTCAGTTTAGCAGTTTGTGTTAAAACAAGACCCTTGCAACCATGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTAGCAGTTTGTGTTAAAACAAGACCCTTGCAACCATGTAC  50

seq1  TCTTAGGAAATTAATATTTACATCTAGGCAAAATATGTACAGGGACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGAAATTAATATTTACATCTAGGCAAAATATGTACAGGGACATTC  100

seq1  ATAGTTGTATTTATAGCAGTCAAGAATGGGAAAATATCTGAATGCTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGTATTTATAGCAGTCAAGAATGGGAAAATATCTGAATGCTTTCA  150

seq1  GTGGGTGAAAAACAAAAAATTGGTATGCATGATATGGTATGATGGATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGAAAAACAAAAAATTGGTATGCATGATATGGTATGATGGATTCC  200

seq1  ATGTGGTATGTTCCACACCAAAACTCACAGTGGCGTTTGATCCCAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTATGTTCCACACCAAAACTCACAGTGGCGTTTGATCCCAGAGAA  250

seq1  GTCTTGAAGAGTCGGAATCTCTTGAAGAGATGATGCCTAATAGGAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAGAGTCGGAATCTCTTGAAGAGATGATGCCTAATAGGAGAGGA  300

seq1  CCATGCTGTTGTAGTTACTACTGTTAGAATGGATTAATGCCTGCCAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGTTGTAGTTACTACTGTTAGAATGGATTAATGCCTGCCAGTGC  350

seq1  TCTAAGAATGGTTGAGATTTTGAGGGGCTGGATTAGGGAATAGAAGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAATGGTTGAGATTTTGAGGGGCTGGATTAGGGAATAGAAGAATG  400

seq1  GACTCTCAGAAGGTTAAATTAAGCTTTCTGGCTTTACACTGTGCTCTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCAGAAGGTTAAATTAAGCTTTCTGGCTTTACACTGTGCTCTGCT  450

seq1  CTTGATGGGTGATCTCTCTGTAGTATGTACTCCTACTATGTGATGCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGGGTGATCTCTCTGTAGTATGTACTCCTACTATGTGATGCTATT  500

seq1  TACCACTTTGTGATGTACCCAGGGACTCCTTACCATGTCAGAGTGTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTTTGTGATGTACCCAGGGACTCCTTACCATGTCAGAGTGTAGCA  550

seq1  AACTAAAAGGACTAATGTGTAATAAGGCAACTCAGAAAATAAACAAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAAGGACTAATGTGTAATAAGGCAACTCAGAAAATAAACAAATAT  600

seq1  GTTAACAACATATACAACAAAGGGGATTCTCTAGAGAATTATGTTGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACAACATATACAACAAAGGGGATTCTCTAGAGAATTATGTTGAGTG  650

seq1  TTAAAAGCCTGTTTCAAAAACAGAATTCTGTATGACTCTGTTTGTACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGCCTGTTTCAAAAACAGAATTCTGTATGACTCTGTTTGTACACA  700

seq1  GTATTACAGTATTATGTCAGGTTTTTACATAGTATTATGCCAGGGAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACAGTATTATGTCAGGTTTTTACATAGTATTATGCCAGGGAGGGA  750

seq1  GGGAGGGAGAGAGA  764
      ||||||||||||||
seq2  GGGAGGGAGAGAGA  764