BAC Information

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BAC

Clone NameB6Ng01-207O23
Chromosome6 (Build37)
Map Location 22,977,371 - 22,978,504
singlet/doubletsinglet
Overlap genePtprz1
Upstream geneA430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948, LOC100040959, LOC668018, LOC668022
Downstream geneAass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2, Rnf133, Rnf148, Tas2r118
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207O23.bB6Ng01-207O23.g
ACCGA026947GA026948
length1,1771,134
definitionB6Ng01-207O23.b B6Ng01-207O23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataatgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccacaccagtcagaatgggtaagatcaaaaattcaggtgacagcag
atgctggcgaggatgtggagaaagaggaacactcctccattgttggtggg
attgcaagcttgtacaaccactctggaaatcagtttggcggttccttaga
aaattagacatggtactaccggaggatcctgcaatacctctcctggtcat
atatccagaggatgttccaactggtaagaaggacacctgctccactatgt
tcatagcagccttatttataatagccagaagttggaaagaacccagatgg
ccctcaacggaggaatggatacagaaaatgtggtacatttacacaatgga
gtactaggcagctattaagaacaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaag
aactcacacaatatgtactcactgataagtggatattagcccacaaactt
agaatacccaagatacaatttcctaaacacatgaaactcaagaagaacga
agaccaaagtgtggacactttgccccttcttagacttgggaacaaatcac
ccatggaaggagttacagagacacagtttggagctgagacaaaaggatgg
accatgtagagactgccatatctggggatccttcccataatcagcctcca
aatgctgacaccattgcatacactagcaagattttgctgaaaggaccctg
atatagctgtctcatgtgagactatgccggggcctagcaaacacagaagt
ggaggctcacagtcagctattggatggatcacagggcccacaatggagga
gctggagaaagtaaccaaggagctaaaggatctgcaaccctataggttga
cacatatgaactaccagtaccccctgagctcgtgtctcttagctgcatat
tgtattcagaagatgcttagttgtcaatcagtggaagagaggcccaattg
atcatgcaacctttatctgcctcaagatacaggcattgccaggtcaagaa
tttggagctgggagagttgcgtgccat
gaattcacttctctgacctcagtgtcaagggtagaattaactcaaaggca
gactgttagaccaagagccagggaaatgacagagttctgctgacagtcag
tcaaccacattggggaaattaaattatacatattctacagttctaaagag
tgcaataaagctggtgtcattaagttgtctaaaacaatagagcctcaata
ctggctttataatatcatttgcatttttagtactaatatgggaaattttc
agtttagatttatttatcatctgtggtatatataacactgccaggaaaat
ttgaattaagactgggccgataccctctcatctgtagaagtatcagtcta
tgagaatattcgtattctatccagaacatacaatttaacctgaattcccc
ctctctctcttataaaataacataagaacagtatttaatccaaaatcctg
tagtcacaggatctcctatggtttattcattgtttgcattttcattatat
gtcagatagcatttattatacaatggtatatatacatccttgtagcataa
cccattcagggtttacacacttcccataaaaatgcttacatcaacataat
tggcattgatgtaatcagtcagttttccatctttttcagcaagttgtgtg
agcttaaccctgctatgatcatctggaacaaaaagagaatatatttcact
agagtagagattactgttcataatgaagtttttctacatttgtatcataa
ttttaccataaaattaaactcaacaaaaaataacctactttattgggata
tattgatttgacaaacataacaaagacagatgggcaatgatctccaagtt
aagaaagttttgaatgcagtgagactaagctattcaggaagtaatgtaca
agtcacaagcgagagaagcaccgtaccacggatgaatgggagacagaaac
taattggtataataggggcaataagcaaagtcagatagatttttgaaatg
gcaagttagatagatttttgaaatttggtataatacgcatactaaagtta
gaatggattttgaaattgcacaggactggcacaagtggaggttctagaat
gagacaagtgtggtgggagcaatcactagctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22977371_22978504
seq2: B6Ng01-207O23.g_65_1198 (reverse)

seq1  CTCAGCTTTGTGA-TGCTCCCACCACACTTGTCTCA-TCTAGAA-CTCCA  47
      |||||| | |||| |||||||||||||||||||||| ||||||| |||||
seq2  CTCAGC-TAGTGATTGCTCCCACCACACTTGTCTCATTCTAGAACCTCCA  49

seq1  CTGTTCCCAGTCCCTGTGCCATTTCAAAAATCCA-TCTAACTTTGGTTAT  96
      ||  | ||||| ||||||| ||||| |||||||| ||||||||| | |||
seq2  CTTGTGCCAGT-CCTGTGCAATTTC-AAAATCCATTCTAACTTTAG-TAT  96

seq1  TGCCTTATTATACC-AATTTCAAAAATCTATCTAACTTTGCCATTTCAAA  145
         | ||||||||| ||||||||||||||||||||| |||||||||||||
seq2  --GCGTATTATACCAAATTTCAAAAATCTATCTAAC-TTGCCATTTCAAA  143

seq1  AATCTATCTGACTTTGCTTATTG-CCCTATTATACCAATTTAGTTTCTGT  194
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  AATCTATCTGACTTTGCTTATTGCCCCTATTATACCAA-TTAGTTTCTGT  192

seq1  CT-CCATTCAT-CGTGGTACGGTGCTTCTCTCGCTTGTGACTTGTACATT  242
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATTCATCCGTGGTACGGTGCTTCTCTCGCTTGTGACTTGTACATT  242

seq1  ACTTCCTGAATAGCTTAGTCTCACTGCATTCAAAACTTTCTTAACTTGGA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGAATAGCTTAGTCTCACTGCATTCAAAACTTTCTTAACTTGGA  292

seq1  GATCATTGCCCATCTGTCTTTGTTATGTTTGTCAAATCAATATATCCCAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTGCCCATCTGTCTTTGTTATGTTTGTCAAATCAATATATCCCAA  342

seq1  TAAAGTAGGTTATTTTTTGTTGAGTTTAATTTTATGGTAAAATTATGATA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGGTTATTTTTTGTTGAGTTTAATTTTATGGTAAAATTATGATA  392

seq1  CAAATGTAGAAAAACTTCATTATGAACAGTAATCTCTACTCTAGTGAAAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTAGAAAAACTTCATTATGAACAGTAATCTCTACTCTAGTGAAAT  442

seq1  ATATTCTCTTTTTGTTCCAGATGATCATAGCAGGGTTAAGCTCACACAAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTCTTTTTGTTCCAGATGATCATAGCAGGGTTAAGCTCACACAAC  492

seq1  TTGCTGAAAAAGATGGAAAACTGACTGATTACATCAATGCCAATTATGTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAAAAGATGGAAAACTGACTGATTACATCAATGCCAATTATGTT  542

seq1  GATGTAAGCATTTTTATGGGAAGTGTGTAAACCCTGAATGGGTTATGCTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAGCATTTTTATGGGAAGTGTGTAAACCCTGAATGGGTTATGCTA  592

seq1  CAAGGATGTATATATACCATTGTATAATAAATGCTATCTGACATATAATG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGTATATATACCATTGTATAATAAATGCTATCTGACATATAATG  642

seq1  AAAATGCAAACAATGAATAAACCATAGGAGATCCTGTGACTACAGGATTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCAAACAATGAATAAACCATAGGAGATCCTGTGACTACAGGATTT  692

seq1  TGGATTAAATACTGTTCTTATGTTATTTTATAAGAGAGAGAGGGGGAATT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTAAATACTGTTCTTATGTTATTTTATAAGAGAGAGAGGGGGAATT  742

seq1  CAGGTTAAATTGTATGTTCTGGATAGAATACGAATATTCTCATAGACTGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAAATTGTATGTTCTGGATAGAATACGAATATTCTCATAGACTGA  792

seq1  TACTTCTACAGATGAGAGGGTATCGGCCCAGTCTTAATTCAAATTTTCCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTACAGATGAGAGGGTATCGGCCCAGTCTTAATTCAAATTTTCCT  842

seq1  GGCAGTGTTATATATACCACAGATGATAAATAAATCTAAACTGAAAATTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGTTATATATACCACAGATGATAAATAAATCTAAACTGAAAATTT  892

seq1  CCCATATTAGTACTAAAAATGCAAATGATATTATAAAGCCAGTATTGAGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTAGTACTAAAAATGCAAATGATATTATAAAGCCAGTATTGAGG  942

seq1  CTCTATTGTTTTAGACAACTTAATGACACCAGCTTTATTGCACTCTTTAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTGTTTTAGACAACTTAATGACACCAGCTTTATTGCACTCTTTAG  992

seq1  AACTGTAGAATATGTATAATTTAATTTCCCCAATGTGGTTGACTGACTGT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAGAATATGTATAATTTAATTTCCCCAATGTGGTTGACTGACTGT  1042

seq1  CAGCAGAACTCTGTCATTTCCCTGGCTCTTGGTCTAACAGTCTGCCTTTG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAACTCTGTCATTTCCCTGGCTCTTGGTCTAACAGTCTGCCTTTG  1092

seq1  AGTTAATTCTACCCTTGACACTGAGGTCAGAGAAGTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTCTACCCTTGACACTGAGGTCAGAGAAGTGAATTC  1134