BAC Information

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BAC

Clone NameB6Ng01-208D03
Chromosome6 (Build37)
Map Location 132,130,780 - 132,270,196
singlet/doubletdoublet
Overlap genePrb1, LOC631126, LOC100043878, Prpmp5
Upstream geneEG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
Downstream geneEG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208D03.bB6Ng01-208D03.g
ACCGA027138GA027139
length1,1291,048
definitionB6Ng01-208D03.b B6Ng01-208D03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,269,087 - 132,270,196)(132,130,780 - 132,131,825)
sequence
gaattctatctacatcttcacaaatgccaggaacacactgtcttcaaata
gctaagagaaaagtctcatgaccactcctacaatgacatacttaattcga
gaaggcctcacctcctaataggaacactacttatgaaaagcatattctaa
ataccatacactcctaagataaggttttcttcattgtatatataaatgca
gcacatactgcatatatgtgagtttgcattgatggagactggaagaggat
gtcaggcttttgttatttttatcttcttcccttaagacatgaaatctcat
gaaacatagtgtgatgttgtcaaccagtaatctcacaactcatcctgctt
ctgctttatatattactgaggttataattaccaatgtgaccatcaataat
tttgcatggattctgggaatttaaacacagttcatgaggcttacaagcac
actttaccactgagccatactttcagtcacagtaggagtattccaacaca
atccagtcagttgtctggaaattgatcaaggctaaattaacattttctca
tgtattaatttttgattctccaaacttaccagtaaagaaatcttcaaacc
aaaatgtagagatttgctcagcataggatatattactgtttatctgctac
agaccctctgggcccctgtgcctgcgtagaaaagagtctctagggtagat
gggcaaagcttaggacggagtgacagacagacagacacacacacaagaga
ggtgttgaatctgaatgtaattttctggtcgagcttagactaattatatt
acagcgaatatcataaattgtaaaacataacagatatggtacattgaagt
tttccaggtgcaagaggagtgactacaaaaagaatttgcaggaaccagat
aaatgttcatgttagggataagtatccctccagatacaagaggagtgact
tcaaaaggactatgtttactttagagattagcacctgctttgggattcac
actttagccttatttgggctaggggggtataaactcttgctgcttcagga
ataagtagtgtcatgaactgaattcttaggcctgtatctattctatgtct
gagattccattattcaggtataggtatat
gaattccattatctatttgattgtgtctgaagagattcattttgcttttt
aaaaataaataaggaaatctcagtctctaaacatggccataatccatggt
aatagggctaggctttctatatgagaacagaatatttgggaaaaatcaga
gctcgtaatactttatacagattttttcaccaattcccaaacatgtattc
aaataccaaaaaatatacttgatatttttatttcacgtctatgtggcaca
gtctactatatagtcaaattttctatatcttccaaatacatctcaaaagt
gacaaaacactctagctctcctagctctgagcagtccacactccttcctc
aaaacccactaatactccatgaatgctcacttaacatatttactataatt
cctactagccttcataacaaatgtttgggtggtaatctaaaatagtctcc
tttggcagaagtggtaatgtaggtacaagccaaggcaggtaaaagaagtt
gtggtctagcaaaaagtcaattatgaagttagcagtaattacccaaggac
ttgaaattatttatatgcttaagaattcaaggaaagaagtatttagcttg
gaataaatttctagtgaaaggtttctggtttccttctgctgaattgcaat
ttcagctttcatagacaagtatatttgtataataaaatggttgtttttca
ctttctgctgatacaatatgctgtgcttcatacagagataccactgtgga
tgaattgcctattactgattttgaaataaaaataaatggaaaaacagatt
atgttataaggcccctcttctgtggtagattgttcaatatactgaatagt
taagattttacttgtaggaacactctatgaccaaaccaactattattaaa
catatatatatatattttaaatagaaaggttgtttatagctcagaagttc
atttccattattcgccatgttgggtagcatggcaacatccaggcaggaat
agctctggacagggagttgaaaattctaaatcttgatcaaaacagacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132269087_132270196
seq2: B6Ng01-208D03.b_76_1176 (reverse)

seq1  ATATA-CTATA-CTGAATAATGGGAATTCTCCAGACATAGATAAGAATTA  48
      ||||| ||||| |||||||||||  | ||| ||||||||||  |||  ||
seq2  ATATACCTATACCTGAATAATGG--AATCT-CAGACATAGAATAGA--TA  45

seq1  ACAAGGCCTAAGAATTCCAAGGTTCATGACACTACTTTATTCCTGAAGCC  98
         ||||||||||||||    |||||||||||||| ||||||||||||| 
seq2  --CAGGCCTAAGAATTC---AGTTCATGACACTAC-TTATTCCTGAAGC-  88

seq1  AGGCAAGAGTTTATA-CCCCCTAGCCCAAATAAGGCTAAAGTGTGAAT-C  146
        ||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  -AGCAAGAGTTTATACCCCCCTAGCCCAAATAAGGCTAAAGTGTGAATCC  137

seq1  CAAAGCAGGTGCTAATCTCTAAAGTAAACATAGTCCTTTTGAAGTCACTC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAGGTGCTAATCTCTAAAGTAAACATAGTCCTTTTGAAGTCACTC  187

seq1  CTCTTGTATCTGGAGGGATACTTATCCCTAACATGAACATTTATCTGGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTATCTGGAGGGATACTTATCCCTAACATGAACATTTATCTGGTT  237

seq1  CCTGCAAATTCTTTTTGTAGTCACTCCTCTTGCACCTGGAAAACTTCAAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAAATTCTTTTTGTAGTCACTCCTCTTGCACCTGGAAAACTTCAAT  287

seq1  GTACCATATCTGTTATGTTTTACAATTTATGATATTCGCTGTAATATAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATATCTGTTATGTTTTACAATTTATGATATTCGCTGTAATATAAT  337

seq1  TAGTCTAAGCTCGACCAGAAAATTACATTCAGATTCAACACCTCTCTTGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTAAGCTCGACCAGAAAATTACATTCAGATTCAACACCTCTCTTGT  387

seq1  GTGTGTGTCTGTCTGTCTGTCACTCCGTCCTAAGCTTTGCCCATCTACCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTCTGTCTGTCTGTCACTCCGTCCTAAGCTTTGCCCATCTACCC  437

seq1  TAGAGACTCTTTTCTACGCAGGCACAGGGGCCCAGAGGGTCTGTAGCAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACTCTTTTCTACGCAGGCACAGGGGCCCAGAGGGTCTGTAGCAGA  487

seq1  TAAACAGTAATATATCCTATGCTGAGCAAATCTCTACATTTTGGTTTGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTAATATATCCTATGCTGAGCAAATCTCTACATTTTGGTTTGAA  537

seq1  GATTTCTTTACTGGTAAGTTTGGAGAATCAAAAATTAATACATGAGAAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTACTGGTAAGTTTGGAGAATCAAAAATTAATACATGAGAAAA  587

seq1  TGTTAATTTAGCCTTGATCAATTTCCAGACAACTGACTGGATTGTGTTGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTTAGCCTTGATCAATTTCCAGACAACTGACTGGATTGTGTTGG  637

seq1  AATACTCCTACTGTGACTGAAAGTATGGCTCAGTGGTAAAGTGTGCTTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCCTACTGTGACTGAAAGTATGGCTCAGTGGTAAAGTGTGCTTGT  687

seq1  AAGCCTCATGAACTGTGTTTAAATTCCCAGAATCCATGCAAAATTATTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCATGAACTGTGTTTAAATTCCCAGAATCCATGCAAAATTATTGA  737

seq1  TGGTCACATTGGTAATTATAACCTCAGTAATATATAAAGCAGAAGCAGGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACATTGGTAATTATAACCTCAGTAATATATAAAGCAGAAGCAGGA  787

seq1  TGAGTTGTGAGATTACTGGTTGACAACATCACACTATGTTTCATGAGATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTGAGATTACTGGTTGACAACATCACACTATGTTTCATGAGATT  837

seq1  TCATGTCTTAAGGGAAGAAGATAAAAATAACAAAAGCCTGACATCCTCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTTAAGGGAAGAAGATAAAAATAACAAAAGCCTGACATCCTCTT  887

seq1  CCAGTCTCCATCAATGCAAACTCACATATATGCAGTATGTGCTGCATTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCCATCAATGCAAACTCACATATATGCAGTATGTGCTGCATTTA  937

seq1  TATATACAATGAAGAAAACCTTATCTTAGGAGTGTATGGTATTTAGAATA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAATGAAGAAAACCTTATCTTAGGAGTGTATGGTATTTAGAATA  987

seq1  TGCTTTTCATAAGTAGTGTTCCTATTAGGAGGTGAGGCCTTCTCGAATTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCATAAGTAGTGTTCCTATTAGGAGGTGAGGCCTTCTCGAATTA  1037

seq1  AGTATGTCATTGTAGGAGTGGTCATGAGACTTTTCTCTTAGCTATTTGAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTCATTGTAGGAGTGGTCATGAGACTTTTCTCTTAGCTATTTGAA  1087

seq1  GACAGTGTGTTCCT  1110
      ||||||||||||||
seq2  GACAGTGTGTTCCT  1101

seq1: chr6_132130780_132131825
seq2: B6Ng01-208D03.g_66_1113

seq1  GAATTCCATTATCTATTTGATTGTGTCTGAAGAGATTCATTTTGCTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTATCTATTTGATTGTGTCTGAAGAGATTCATTTTGCTTTTT  50

seq1  AAAAATAAATAAGGAAATCTCAGTCTCTAAACATGGCCATAATCCATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATAAGGAAATCTCAGTCTCTAAACATGGCCATAATCCATGGT  100

seq1  AATAGGGCTAGGCTTTCTATATGAGAACAGAATATTTGGGAAAAATCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGCTAGGCTTTCTATATGAGAACAGAATATTTGGGAAAAATCAGA  150

seq1  GCTCGTAATACTTTATACAGATTTTTTCACCAATTCCCAAACATGTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTAATACTTTATACAGATTTTTTCACCAATTCCCAAACATGTATTC  200

seq1  AAATACCAAAAAATATACTTGATATTTTTATTTCACGTCTATGTGGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCAAAAAATATACTTGATATTTTTATTTCACGTCTATGTGGCACA  250

seq1  GTCTACTATATAGTCAAATTTTCTATATCTTCCAAATACATCTCAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTATATAGTCAAATTTTCTATATCTTCCAAATACATCTCAAAAGT  300

seq1  GACAAAACACTCTAGCTCTCCTAGCTCTGAGCAGTCCACACTCCTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAACACTCTAGCTCTCCTAGCTCTGAGCAGTCCACACTCCTTCCTC  350

seq1  AAAACCCACTAATACTCCATGAATGCTCACTTAACATATTTACTATAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCACTAATACTCCATGAATGCTCACTTAACATATTTACTATAATT  400

seq1  CCTACTAGCCTTCATAACAAATGTTTGGGTGGTAATCTAAAATAGTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTAGCCTTCATAACAAATGTTTGGGTGGTAATCTAAAATAGTCTCC  450

seq1  TTTGGCAGAAGTGGTAATGTAGGTACAAGCCAAGGCAGGTAAAAGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAGAAGTGGTAATGTAGGTACAAGCCAAGGCAGGTAAAAGAAGTT  500

seq1  GTGGTCTAGCAAAAAGTCAATTATGAAGTTAGCAGTAATTACCCAAGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTAGCAAAAAGTCAATTATGAAGTTAGCAGTAATTACCCAAGGAC  550

seq1  TTGAAATTATTTATATGCTTAAGAATTCAAGGAAAGAAGTATTTAGCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTATTTATATGCTTAAGAATTCAAGGAAAGAAGTATTTAGCTTG  600

seq1  GAATAAATTTCTAGTGAAAGGTTTCTGGTTTCCTTCTGCTGAATTGCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATTTCTAGTGAAAGGTTTCTGGTTTCCTTCTGCTGAATTGCAAT  650

seq1  TTCAGCTTTCATAGACAAGTATATTTGTATAATAAAATGGTTGTTTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTTCATAGACAAGTATATTTGTATAATAAAATGGTTGTTTTTCA  700

seq1  CTTTCTGCTGATACAATATGCTGTGCTTCATACAGAGATACCACTGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCTGATACAATATGCTGTGCTTCATACAGAGATACCACTGTGGA  750

seq1  TGAATTGCCTATTACTGATTTTGAAATAAAAATAAATGGAAAAACAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGCCTATTACTGATTTTGAAATAAAAATAAATGGAAAAACAGATT  800

seq1  ATGTTATAAGGCCCCTCTTCTGTGGTAGATTGTTCAATATACTGAATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATAAGGCCCCTCTTCTGTGGTAGATTGTTCAATATACTGAATAGT  850

seq1  TAAGATTTTACTTGTAGGAACACTCTATGACCAAACCAACTATTATTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTTACTTGTAGGAACACTCTATGACCAAACCAACTATTATTAAA  900

seq1  CATATATATATATATTTTAAATAG-AAGGTTGTTTATAGCTCAGAAGTTC  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATATATATATATATTTTAAATAGAAAGGTTGTTTATAGCTCAGAAGTTC  950

seq1  A-TTCCATTA-TCGCCATGTTGGGTAGCATGGCAACATCCAGGCAGGAAT  997
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTATTCGCCATGTTGGGTAGCATGGCAACATCCAGGCAGGAAT  1000

seq1  AGCTCTGGACAGGGAGTTGAAAATTCTAAATCTTGATCCAAAACAGACG  1046
      ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGCTCTGGACAGGGAGTTGAAAATTCTAAATCTTGAT-CAAAACAGACG  1048