BAC Information

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BAC

Clone NameB6Ng01-209F08
Chromosome6 (Build37)
Map Location 59,708,936 - 59,709,651
singlet/doubletsinglet
Overlap genenone
Upstream geneHerc3, Nap1l5, D430015B01Rik, Tigd2, Gprin3, EG634166
Downstream geneEG627108, EG434019, LOC671300, EG627178, LOC100041706, LOC100041717, A530053G22Rik, LOC667066, LOC100041726, Snca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209F08.bB6Ng01-209F08.g
ACCGA027977GA027978
length1,062878
definitionB6Ng01-209F08.b B6Ng01-209F08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgagtaatatagaatagctgagaagcacctgaaaaaaat
attcaacatccttaatcatcagggaaatgcaaatcaaagcaaacctgtga
ttccatctcacaccagtcagaatggctaagatcaaaaagtcaggtgacag
atgatactggcaaggatgtggagaaagaggaacagtcttccattgctgct
ggaattacaagcttgtacaaccattctggaaatcagtgtgatggttcctc
agaaaattgacatattactacctgaagatacagcaatacttgtcctggga
atatacccagaagatgctccaacttgtaatgaggagttatgtttcactat
gagggacccagatatccctcagcagaggacagaaaatgtggtacatttac
acaatggagtacaatgcaactattaaaaaaatgaatttataaaattctta
aacaaatggatggatctggaagatatcatcctaagtaacgtaacccaatc
acaaaacaacacacatggtatacactcacagttaagtggatattagctca
gaagctcagcatacccaagatacaatttgcaaagcacatgaaactcaaga
agaaggaagaccaaagtatggatacttatatctttcttagaaggaaaaat
aaaataaccatggaaggatttacagagacatattttggagtacagactga
agaaatgaccatcagagactgccctacttggagacccatcacatcaacaa
ccacaaaacccagacactattgagaatgccaactagagcttgctgacagg
agcctgatataactgtctccttagaggctttgccactgtctgacaaatac
agaagtggacgctcacagccatcctttggactgagcacagggtccccaat
gaaggagctagagaaagtactcaagttttctgaaagggtttgcagcccca
taggaggaagaacaattatgaattaatccagtaacccccagtctcgctgg
gtacttaacccaccaatcaaaggaaacacatgttgtgactccttgactct
agctgctttgag
gccagcctgctctacagagtgagttccaggatagctagggctacacagag
gaaccctgtctcagaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaagttaaaatcttccaccatcaggagatct
gagttttaatctgagtcttgattttcgggtgtgttagggtatccaggact
cgctgtggtgggcttactggattatgatgattcccagttgtcttggtttc
tggtagtaatattcttatgtttgcctttcgccatctggtactctctggtg
ttaatgttgtagctgtctcgggttggaactttttcctcctgtgattctgt
tagcctctgtcagcactcctggttatcctgagtcccaccggtcaaagcat
tctctccaggcaagctctcctcttgcagggcaggtgtccataagtgtgga
gctctgatccacttcctgagtcctggggtcagagccttccctgtagtctg
actctcctctggcaaggaaggtgcccagtggtctggctctcagctctgcc
tcctgacagaagatgaagccccaaagggaccttgtccaagaacctctgtt
gcttcttgcattctacgtactcttcagtgatcctgaggtcctgaggcatg
gagagtcctctggggacctttctgccctctgctgggttcaggtagaagat
attagatctggctcagacctgaaagagttcccaaagcttgaatcttcaaa
ccttgaaatgttttttcttctttaaagtagtatatgactcagagaatatc
tatcatataagataatttttgctagattaaaatattttcaaatagattct
tggtacattttagcatattatcaataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_59708936_59709651
seq2: B6Ng01-209F08.g_245_952

seq1  ATTTTCGGGTGTGTTAGGGTATCCAGGACTCGCTGTGGTGGGCTTACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCGGGTGTGTTAGGGTATCCAGGACTCGCTGTGGTGGGCTTACTGG  50

seq1  ATTATGATGATTCCCAGTTGTCTTGGTTTCTGGTAGTAATATTCTTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGATGATTCCCAGTTGTCTTGGTTTCTGGTAGTAATATTCTTATGT  100

seq1  TTGCCTTTCGCCATCTGGTACTCTCTGGTGTTAATGTTGTAGCTGTCTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTCGCCATCTGGTACTCTCTGGTGTTAATGTTGTAGCTGTCTCG  150

seq1  GGTTGGAACTTTTTCCTCCTGTGATTCTGTTAGCCTCTGTCAGCACTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGAACTTTTTCCTCCTGTGATTCTGTTAGCCTCTGTCAGCACTCCT  200

seq1  GGTTATCCTGAGTCCCACCGGTCAGAGCATTCTCTCCAGGCAAGCTCTCC  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGTTATCCTGAGTCCCACCGGTCAAAGCATTCTCTCCAGGCAAGCTCTCC  250

seq1  TCTTGCAGGGCAGGTGTCCATAAGTGTGGAGCTCTGATCCACTTCCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAGGGCAGGTGTCCATAAGTGTGGAGCTCTGATCCACTTCCTGAG  300

seq1  TCCTGGGGTCAGAGCCTTCCCTGTAGTCTGACTCTCCTCTGGCAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGTCAGAGCCTTCCCTGTAGTCTGACTCTCCTCTGGCAAGGAAG  350

seq1  GTGCCCAGTGGTCTGGCTCTCAGCTCTGCCTCCTGACAGAAGATGAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCAGTGGTCTGGCTCTCAGCTCTGCCTCCTGACAGAAGATGAAGCC  400

seq1  CCAAAGGGACCTTGTCCAAGAACCTCTGTTGCTTCTTGCATTCTACGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGGACCTTGTCCAAGAACCTCTGTTGCTTCTTGCATTCTACGTAC  450

seq1  TCTTCAGTGATCCTGAGGTCCTGAGGCATGGAGAGTCCTCTGGGGACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGTGATCCTGAGGTCCTGAGGCATGGAGAGTCCTCTGGGGACCTT  500

seq1  TCTGCCCTCTGCTGGGTTCAGGTAGAAGATATTAGATCTGGCTCAGACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCTCTGCTGGGTTCAGGTAGAAGATATTAGATCTGGCTCAGACCT  550

seq1  GAAAGAGTTCCCAAAGCTTGAATCTTCAAACCTTGAAATGTTTTTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTTCCCAAAGCTTGAATCTTCAAACCTTGAAATGTTTTTTCTTC  600

seq1  TTTAAAGTAGTAATATGAACTCAGAGAAATATCTATCATATAAAGATAAT  650
      ||||||||||| ||||| |||||||| |||||||||||||| ||||||||
seq2  TTTAAAGTAGT-ATATG-ACTCAGAG-AATATCTATCATAT-AAGATAAT  646

seq1  TTTTGCTAAGAATAAAATATTTTCAAATTAGAATTCTTGGTACATTTTAG  700
      ||||||| ||| ||||||||||||||| ||| ||||||||||||||||||
seq2  TTTTGCT-AGATTAAAATATTTTCAAA-TAG-ATTCTTGGTACATTTTAG  693

seq1  CAATATTATCAATAGA  716
      | ||||||||||||||
seq2  C-ATATTATCAATAGA  708