MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-209N24
Chromosome	6 (Build37)
Map Location	108,665,170 - 108,666,233
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Setmar, Sumf1, LOC100043718, Itpr1, LOC677205, Bhlhb2
Downstream gene	Arl8b, Edem1, EG627371, LOC639110, LOC100043720
Link	Open Mouse BAC browser

Click to get alignment info.

name	Setmar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74729 MGI:1921979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 4 Proteins

name	Sumf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58911 MGI:1889844
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043718 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 344 ESTs, 9 Proteins

name	Itpr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16438 MGI:96623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC677205 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 233 ESTs, 13 Proteins pseudo : _no_value

name	Bhlhb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20893 MGI:1097714
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67166 MGI:1914416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Edem1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192193 MGI:2180139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627371 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627371 MGI:3648518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 230 ESTs, 28 Proteins

name	LOC639110 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100043720 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043720
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Setmar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378019 GeneID:74729 MGI:1921979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 4 Proteins product : SET domain and mariner transposase fusion gene transcript_id : XM_982623.1

name	Sumf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144094255 GeneID:58911 MGI:1889844
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sulfatase modifying factor 1 transcript_id : NM_145937.2

name	LOC100043718 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255393 GeneID:100043718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 344 ESTs, 9 Proteins product : similar to rat ribosomal protein L36 transcript_id : XM_001480721.1

name	Itpr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475598 GeneID:16438 MGI:96623
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol 1,4,5-triphosphate receptor 1 transcript_id : NM_010585.2

name	Bhlhb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373546 GeneID:20893 MGI:1097714
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic helix-loop-helix domain containing, class B2 transcript_id : NM_011498.3

name	Arl8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115292448 GeneID:67166 MGI:1914416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 8B transcript_id : NM_026011.3

name	Edem1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119709811 GeneID:192193 MGI:2180139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ER degradation enhancer, mannosidase alpha-like 1 transcript_id : NM_138677.2

name	EG627371 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255258 GeneID:627371 MGI:3648518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 230 ESTs, 28 Proteins product : predicted gene, EG627371 transcript_id : XM_892026.3

name	Setmar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378020 GeneID:74729 MGI:1921979
definition	codon_start : 1 product : SET domain and mariner transposase fusion protein_id : XP_987717.1

name	Sumf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144094256 GeneID:58911 MGI:1889844
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IPI] GO_process : GO:0030279 - negative regulation of ossification [Evidence IMP]; GO:0016567 - protein ubiquitination [Evidence IMP] codon_start : 1 product : sulfatase modifying factor 1 precursor protein_id : NP_666049.2

name	LOC100043718 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255394 GeneID:100043718
definition	codon_start : 1 product : similar to rat ribosomal protein L36 protein_id : XP_001480771.1

name	Itpr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754390 GeneID:16438 MGI:96623
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0005789 - endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005220 - inositol 1,4,5-triphosphate-sensitive calcium-release channel activity [Evidence IEA]; GO:0008095 - inositol-1,4,5-triphosphate receptor activity [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence ISS] [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : InsP3R type I; opisthotonus; InsP>3 product : inositol 1,4,5-triphosphate receptor 1 protein_id : NP_034715.1

name	Bhlhb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755680 CCDS:CCDS20400.1 GeneID:20893 MGI:1097714
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence TAS] [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : eip1 (E47 interaction protein 1); cytokine response gene 8 product : basic helix-loop-helix domain containing, class B2 protein_id : NP_035628.1

name	Arl8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385518 GeneID:67166 MGI:1914416
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : small G protein indispensable for equal chromosome segregation 1 product : ADP-ribosylation factor-like 10C protein_id : NP_080287.1

name	Edem1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27413906 CCDS:CCDS20402.1 GeneID:192193 MGI:2180139
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004559 - alpha-mannosidase activity [Evidence IDA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0004571 - mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [Evidence IEA] GO_process : GO:0030433 - ER-associated protein catabolism [Evidence IDA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : ER degradation enhancing alpha mannosidase-like; ER degradation ER degradation enhancer, mannosidase alpha-like 1 product : ER degradation enhancer, mannosidase alpha-like 1 protein_id : NP_619618.1

name	EG627371 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255259 GeneID:627371 MGI:3648518
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897119.3

name	LOC639110 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639110
definition	number : 1 pseudo : _no_value

name	LOC639110 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639110
definition	number : 2 pseudo : _no_value

name	LOC100043720 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043720
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:116327
definition	standard_name : D6Mit105

name	(CDS detail)
type	STS
link
xref	UniSTS:124070
definition	standard_name : 34.MMHAP12FRD10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159552
definition	standard_name : AI463102

name	(CDS detail)
type	STS
link
xref	UniSTS:179428
definition	standard_name : AI851573

name	(CDS detail)
type	STS
link
xref	UniSTS:123199
definition	standard_name : 14.MMHAP17FE2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124048
definition	standard_name : 33.MMHAP69FLC6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123615
definition	standard_name : 23.MMHAP7FLH2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:143635
definition	standard_name : Itpr1

name	(CDS detail)
type	STS
link
xref	UniSTS:235514
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224883
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:208007
definition	standard_name : AI267118

name	(CDS detail)
type	STS
link
xref	UniSTS:460154
definition	standard_name : stSG633507

name	(CDS detail)
type	STS
link
xref	UniSTS:225121
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:161801
definition	standard_name : RH124979

name	(CDS detail)
type	STS
link
xref	UniSTS:235516
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235515
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:212632
definition	standard_name : RH129325

name	(CDS detail)
type	STS
link
xref	UniSTS:142588
definition	standard_name : D6Mit344

name	(CDS detail)
type	STS
link
xref	UniSTS:224237
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224551
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130881
definition	standard_name : D6Mit327

name	LOC677205 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255395 GeneID:677205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 233 ESTs, 13 Proteins product : similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 pseudo : _no_value transcript_id : XR_034818.1

clone name	MSMg01-362G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545J20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-146D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375L12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-175D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167A06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-209N24.g
ACC		GA028375
length		1,081
definition		B6Ng01-209N24.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattctactacttgcttgggaggctaaggctggaggacagacgctccag atcagcctgggctactacagcaaggccttgtctcaaagccatagcaacat actaaaaggacaaatataaagaggtgttatgagatggagagatagctcag tggttaagagcactgactgcttttccagaggtcctgagttcaattcccag caaccatatggtggttcacaaccatctgtaataagagtggatgccctctt ctggtgtatctgaagacagctacagtgtactcatatacattaaatatata catacatacgtacatacatacattcatacatacatagagatgttattaga gttgatctgcgccagggcttggatctgtatccaaggcttacaacaccaag gttgagcacagtttctatgagtttctgaaagaaaatacagctatctttgc tactggccttctgagccctggaaggacagcattagtgcagataactttta tagactcttagcattgcactcaagacacagggccacctcctcctttgtat ggaagcctcagagaggacctggtttaaaaacagcccagctgtcacagatt agagatgacatcatttgctatctgagtgagcaatgaaggaagacccaggt ctctggagctggagcaatgaggtatggctaccagtggccgaacaaactgt agttatctgcttcccatttctcttgcccagagatactctcacaccttttt tctcaacccaggcactgctgttgggtgcccttgtactgaaaaaggagaat ctggggaagcaatgaactaaagagaccagtcttggctgcttgggagccaa agatgccaccagaagggaacttgggccttggcctctgcctttgtactttt cagaaagcacaatgtctgatgttcttataaaattgcctccagatgtaagt agcaattaacattcttttccctcctctagtatagacgtgggaactcagac ttcacatatggctgagttgagtggtctacccacctaagcaaacttacaag gagaaacttgaattcatgatcccatctcaac
quality values		Open. Hide. 62 49 30 33 62 62 62 62 54 47 62 62 22 21 27 27 27 41 30 27 38 54 47 49 51 54 62 62 54 59 62 62 62 62 59 59 62 59 43 62 62 59 62 62 62 62 62 59 59 62 59 62 62 59 62 62 59 59 62 54 49 43 54 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 36 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 43 39 62 42 54 52 62 62 62 62 62 54 62 62 62 62 62 62 62 52 62 58 54 58 58 58 54 58 54 52 54 58 58 58 58 58 58 58 52 58 52 58 58 58 58 52 54 58 54 54 58 52 58 42 54 54 54 54 58 58 54 54 52 54 58 58 52 58 58 48 58 58 58 58 58 54 46 58 58 58 54 58 52 58 58 58 52 54 41 54 52 54 58 58 41 22 41 52 58 54 58 58 54 42 58 58 58 51 51 37 51 54 58 45 40 50 58 53 58 52 52 50 51 35 50 58 50 53 52 39 46 40 42 49 54 49 40 32 50 52 40 51 58 58 58 53 53 50 51 52 51 52 46 32 54 58 58 42 39 39 50 50 53 49 54 24 53 58 54 41 37 19 32 48 46 22 58 58 50 51 50 50 50 58 48 27 37 41 52 51 51 34 37 37 49 43 58 53 39 58 40 40 49 58 51 39 49 39 38 28 30 41 39 58 40 42 49 36 58 50 39 30 58 52 50 40 46 39 42 29 36 52 52 42 53 53 39 33 38 49 26 54 41 31 45 54 37 37 49 52 38 38 52 39 54 52 39 33 39 21 35 31 37 39 54 47 32 28 45 37 35 33 30 31 54 54 54 54 34 37 39 37 33 13 26 49 37 29 7 54 33 35 42 35 40 31 33 31 33 37 26 54 35 33 52 16 42 29 24 23 44 24 29 29 40 53 28 47 47 40 28 33 30 32 16 47 27 31 31 31 32 52 49 26 32 32 32 27 16 34 37 39 32 33 35 11 7 52 33 9 25 18 26 23 34 24 26 41 32 33 13 9 29 25 32 31 26 46 20 22 51 17 43 16 12 31 24 42 20 22 18 28 31 24 33 11 10 38 25 15 32 22 19 46 25 28 16 22 27 34 7 22 6 7 12 14 26 15 22 13 32 22 25 16 27 16 29 16 42 15 30 6 14 25 18 46 42 23 18 18 27 25 41 22 14 19 16 23 7 16 31 36 23 25 26 15 19 8 13 9 38 21 29 31 11 23 24 46 36 24 9 11 12 27 19 11 9 6 7 14 24 7 32 24 22 25 12 32 33 30 23 6 12 7 16 23 10 32 18 15 30 31 18 41 32 36 11 36 21 24 31 11 31 30 13 14 38 33 19 11 9 7 20 21 9 6 16 23 30 9 23 13 25 29 27 10 29 20 5 17 17 8 7 13 16 19 21 14 17 34 27 25 10 5 5 7 11 22 13 10 18 30 14 32 19 31 21 37 19 7 6 13 13 7 13 10 15 6 5 8 5 5 7 5 16 20 19 11 23 8 6 14 32 9 12 3 5 5 7 19 6 6 4 4 9 13 4 4 13 17 20 11 12 9 17 26 21 11 30

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_108665170_108666233
seq2: B6Ng01-209N24.g_66_1146 (reverse)

seq1  GTTGAGATGGGATCATGAATTCAAGGTTCTCCTTGTATG-TTGCTTAG--  47
      ||||||||||||||||||||||||| ||||||||||| | ||||||||  
seq2  GTTGAGATGGGATCATGAATTCAAGTTTCTCCTTGTAAGTTTGCTTAGGT  50

seq1  TGGTAGACCACTC-ACTCAG-CATATGTGAGGTCTGAG-TCCCACGTCTA  94
       |||||||||||| |||||| ||||||||| ||||||| |||||||||||
seq2  GGGTAGACCACTCAACTCAGCCATATGTGAAGTCTGAGTTCCCACGTCTA  100

seq1  TACTAGAGGA-GGAAAAGAATGTT-ATTGCTACTTACATCT-GAGGC-AT  140
      |||||||||| ||||||||||||| |||||||||||||||| ||||| ||
seq2  TACTAGAGGAGGGAAAAGAATGTTAATTGCTACTTACATCTGGAGGCAAT  150

seq1  TTTATAAGAACATCAGACA-TGTGC-TTCTG-AAAGTAC-AAGGCAGAGG  186
      ||||||||||||||||||| ||||| ||||| ||||||| ||||||||||
seq2  TTTATAAGAACATCAGACATTGTGCTTTCTGAAAAGTACAAAGGCAGAGG  200

seq1  CCAAGG-CCAAGTTCCCTTCTGGTGGCATCTTTGGCTCCAAAGCAGCCAA  235
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  CCAAGGCCCAAGTTCCCTTCTGGTGGCATCTTTGGCTCCCAAGCAGCCAA  250

seq1  GACTGGTCTCTTTAGTTCATTGCTT-CCCAGATTCTCCTTTTTCAGTACA  284
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GACTGGTCTCTTTAGTTCATTGCTTCCCCAGATTCTCCTTTTTCAGTACA  300

seq1  AGGGCACCCAACAGCAGTGCCTGGGTTGAG-AAAAAGGTGTGAGAGTATC  333
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGGGCACCCAACAGCAGTGCCTGGGTTGAGAAAAAAGGTGTGAGAGTATC  350

seq1  TCTGGGCAAGAGAAATGGGAAGCAGATAACTACAGTTTGTTCGGCCACTG  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCAAGAGAAATGGGAAGCAGATAACTACAGTTTGTTCGGCCACTG  400

seq1  GTAGCCATACCTCATTGCTCCAGCTCCAGAGACCTGGGTCTTCCTTCATT  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCATACCTCATTGCTCCAGCTCCAGAGACCTGGGTCTTCCTTCATT  450

seq1  GCTCACTCAGATAGCAAATGATGTCATCTCTAATCTGTGACAGCTGGGCT  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTCAGATAGCAAATGATGTCATCTCTAATCTGTGACAGCTGGGCT  500

seq1  GTTTTTAAACCAGGTCCTCTCTGAGGCTTCCATACAAAGGAGGAGGTGGC  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAACCAGGTCCTCTCTGAGGCTTCCATACAAAGGAGGAGGTGGC  550

seq1  CCTGTGTCTTGAGTGCAATGCTAAGAGTCTATAAAAGTTATCTGCACTAA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCTTGAGTGCAATGCTAAGAGTCTATAAAAGTTATCTGCACTAA  600

seq1  TGCTGTCCTTCCAGGGCTCAGAAGGCCAGTAGCAAAGATAGCTGTATTTT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCCTTCCAGGGCTCAGAAGGCCAGTAGCAAAGATAGCTGTATTTT  650

seq1  CTTTCAGAAACTCATAGAAACTGTGCTCAACCTTGGTGTTGTAAGCCTTG  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAAACTCATAGAAACTGTGCTCAACCTTGGTGTTGTAAGCCTTG  700

seq1  GATACAGATCCAAGCCCTGGCGCAGATCAACTCTAATAACATCTCTATGT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGATCCAAGCCCTGGCGCAGATCAACTCTAATAACATCTCTATGT  750

seq1  ATGTATGAATGTATGTATGTACGTATGTATGTATATATTTAATGTATATG  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGAATGTATGTATGTACGTATGTATGTATATATTTAATGTATATG  800

seq1  AGTACACTGTAGCTGTCTTCAGATACACCAGAAGAGGGCATCCACTCTTA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACTGTAGCTGTCTTCAGATACACCAGAAGAGGGCATCCACTCTTA  850

seq1  TTACAGATGGTTGTGAACCACCATATGGTTGCTGGGAATTGAACTCAGGA  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATGGTTGTGAACCACCATATGGTTGCTGGGAATTGAACTCAGGA  900

seq1  CCTCTGGAAAAGCAGTCAGTGCTCTTAACCACTGAGCTATCTCTCCATCT  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGAAAAGCAGTCAGTGCTCTTAACCACTGAGCTATCTCTCCATCT  950

seq1  CATAACACCTCTTTATATTTGTCCTTTTAGTATGTTGCTATGGCTTTGAG  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACACCTCTTTATATTTGTCCTTTTAGTATGTTGCTATGGCTTTGAG  1000

seq1  ACAAGGCCTTGCTGTAGTAGCCCAGGCTGATCTGGAGCGTCTGTCCTCCA  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCTTGCTGTAGTAGCCCAGGCTGATCTGGAGCGTCTGTCCTCCA  1050

seq1  GCCTTAGCCTCCCAAGCAAGTAGTAGAATTC  1064
      |||||||||||||||||||||||||||||||
seq2  GCCTTAGCCTCCCAAGCAAGTAGTAGAATTC  1081

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information