BAC Information

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BAC

Clone NameB6Ng01-210A10
Chromosome6 (Build37)
Map Location 133,196,301 - 133,197,219
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
Downstream gene5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210A10.bB6Ng01-210A10.g
ACCGA028478GA028479
length6791,111
definitionB6Ng01-210A10.b B6Ng01-210A10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattatatatcctatcatggtgagtttgagtcctttatttaaat
cattttctatcttaaccttcatagaccttaaaacagttttctaaatatta
atattttaagttgagttgtgagactattctttaaccccatcagactcctg
aatttcaataaatattatttaattttttcaggaagtacagtgcaaacagc
tttcaaaaccattgaaaaggcagaggatttttaactgcctgtacaatcac
ccacaaattgtttttttttttttatattactaactttttgtagaggaaga
attattaaggacttgcctaccttgatgttgcaaagctcaacagttgactt
ctctgcatcttgtgtgtccagtaaatacagaatttcctgtacaattgaag
caaggaaattgtctagcccagtggttagcttgccatatatgaggcaaact
ccataatgaagttctttgatgttcatcatgttccttgaatatgaataagg
atactgccgggagtagacttgtttccatgagagtacacatgtagggaccc
ttggctccagccacatatgtagcagaggttggccctattgggcatcaatg
ggagaagaagcccttggctctgtgaaggctcaatgccccagtgtagggga
atgttagggcagtgaggtgggagtggttg
gaattcctttttcattgcattgatccaattatctgtttttgctgtaaaaa
atgtgtttttaatattattcttctgaaacttgctttgaaatctgatattg
tacccaccagaataattatttgtttcttagaatacttttgatgatctaga
gggattagtgtcgacatatgaagtttatgactttagacagtttctgtgaa
gagtcccatgtgtattttggttgggtcatgtttaatctctaaatattgat
gcacatgttacaatgttaatgataccaaaccaggaccgtgggagtttttt
aatactctggtgtttactacatctcttttcttcagagatttatttgtagc
tctaagtgtagaaattttttacatctttcattaggtttccttatagatat
attttatgcaattttcaatgcaaatattttcatgctttctttttcagtat
atttgtaactggtttgtggaaaggctactattttttttccctaagttgat
catgttttctgccattttgatgaaagcattgatccattctcaaagattta
gtaggcaaatgaaaggacctagaaaacattatcatgagtaatgttaccca
ggtacagtaaggcaaattctccatattctacttcatctatggttcataca
tgagattctttaaaaatgaatacataacatggagtagccatggaagtaaa
aactaccaacaatgtgaaggaagaaaagaagttgtagagatagccatggt
agaataaagatgctatgagaaaagatggggaacatgaaaataaataaact
gttcaggtgtaccctacagaggtagaggaaataaagaatggtaagtaaca
ttatatacaatttggagacgatacggggacatatgttttatttttacttg
aaacagctagaatacatgaatgtgtatgttatccaaaagtacaggtatac
gtttaaatgaaattatagtactgggctgataatgctccctacaaatacca
tagactatcaaaccaaaacacacaatggggtggaaaaatcccatagattg
gttggtcagaccaacaacatatcaggttttgtaagtgtctctggttgcat
cctaagtttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133196301_133197219
seq2: B6Ng01-210A10.g_263_1174

seq1  AGAGTCCCATGTGTATTTTGGTTGGGTCATGTTTAATCTCTAAATATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCCATGTGTATTTTGGTTGGGTCATGTTTAATCTCTAAATATTGA  50

seq1  TGCACATGTTACAATGTTAATGATACCAAACCAGGACCGTGGGAGTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGTTACAATGTTAATGATACCAAACCAGGACCGTGGGAGTTTTT  100

seq1  TAATACTCTGGTGTTTACTACATCTCTTTTCTTCAGAGATTTATTTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTCTGGTGTTTACTACATCTCTTTTCTTCAGAGATTTATTTGTAG  150

seq1  CTCTAAGTGTAGAAATTTTTTACATCTTTCATTAGGTTTCCTTATAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGTGTAGAAATTTTTTACATCTTTCATTAGGTTTCCTTATAGATA  200

seq1  TATTTTATGCAATTTTCAATGCAAATATTTTCATGCTTTCTTTTTCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGCAATTTTCAATGCAAATATTTTCATGCTTTCTTTTTCAGTA  250

seq1  TATTTGTAACTGGTTTGTGGAAAGGCTACTATTTTTTTTCCCTAAGTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAACTGGTTTGTGGAAAGGCTACTATTTTTTTTCCCTAAGTTGA  300

seq1  TCATGTTTTCTGCCATTTTGATGAAAGCATTGATCCATTCTCAAAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTTCTGCCATTTTGATGAAAGCATTGATCCATTCTCAAAGATTT  350

seq1  AGTAGGCAAATGAAAGGACCTAGAAAACATTATCATGAGTAATGTTACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCAAATGAAAGGACCTAGAAAACATTATCATGAGTAATGTTACCC  400

seq1  AGGTACAGTAAGGCAAATTCTCCATATTCTACTTCATCTATGGTTCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAGTAAGGCAAATTCTCCATATTCTACTTCATCTATGGTTCATAC  450

seq1  ATGAGATTCTTTAAAAATGAATACATAACATGGAGTAGCCATGGAAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTCTTTAAAAATGAATACATAACATGGAGTAGCCATGGAAGTAA  500

seq1  AAACTACCAACAATGTGAAGGAAGAAAAGAAGTTGTAGAGATAGCCATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACCAACAATGTGAAGGAAGAAAAGAAGTTGTAGAGATAGCCATGG  550

seq1  TAGAATAAAGATGCTATGAGAAAAGATGGGGAACATGAAAATAAATAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAAAGATGCTATGAGAAAAGATGGGGAACATGAAAATAAATAAAC  600

seq1  TGTTCAGGTGTACCCTACAGAGGTAGAGGAAATAAAGAATGGTAAGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGGTGTACCCTACAGAGGTAGAGGAAATAAAGAATGGTAAGTAAC  650

seq1  ATTATATACAATTTGGAGACGATACGGGGACATATGTTTTATTTTTACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATACAATTTGGAGACGATACGGGGACATATGTTTTATTTTTACTT  700

seq1  GAAACAGCTAGAATACATGAATGTGTATG-TATCCAAAAAGTACAGGTAT  749
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  GAAACAGCTAGAATACATGAATGTGTATGTTATCC-AAAAGTACAGGTAT  749

seq1  ACG-TTAAATGAAA-TATAGTACTTGGCTGATAATGCTCCCTACAAATAC  797
      ||| |||||||||| ||||||||| |||||||||||||||||||||||||
seq2  ACGTTTAAATGAAATTATAGTACTGGGCTGATAATGCTCCCTACAAATAC  799

seq1  CATAGACTATCAAACCAAAACCACACAATGGGGTGGAAAAATTCCCATAG  847
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  CATAGACTATCAAACCAAAA-CACACAATGGGGTGGAAAAA-TCCCATAG  847

seq1  ATTGGTTGGTCCAAGACACAAACAAAACAATATCA-GTTTTGTAAGTGTC  896
      |||||||||||  ||||     ||| |  |||||| ||||||||||||||
seq2  ATTGGTTGGTC--AGAC-----CAACAACATATCAGGTTTTGTAAGTGTC  890

seq1  TCTGGTTGCATCCTAGAGTTTCA  919
      ||||||||||||||| |||||||
seq2  TCTGGTTGCATCCTA-AGTTTCA  912