BAC Information

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BAC

Clone NameB6Ng01-210A13
Chromosome6 (Build37)
Map Location 39,499,997 - 39,500,945
singlet/doubletsinglet
Overlap geneDennd2a
Upstream geneLuc7l2, Klrg2, LOC665180, Hipk2, Tbxas1, 1700025N23Rik, Parp12, 4930599N23Rik, A630082K20Rik, Slc37a3, Rab19, Mkrn1, ENSMUSG00000068601
Downstream geneAdck2, Ndufb2, Braf, Fth-ps2, Mrps33, LOC665247, LOC665254, EG434008, Agk, E330009J07Rik, BC052883, Ssbp1, Tas2r137, Tas2r108, 1700016G05Rik, LOC669661, Olfr461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210A13.bB6Ng01-210A13.g
ACCGA028484GA028485
length9571,004
definitionB6Ng01-210A13.b B6Ng01-210A13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcatggagctggtgtggggacaagtgaagtacgacgataggta
atatgtataatttttaaagagaccatcagaacttcattttcacaggagtg
actgtgcacaaatgctatttaataagtgcttgggctttgagatcctcttt
gagccagcaattccacttttaagaatttagctgacaggaatattagagcc
aggacttgtggcaacatcatttgcagtaactaaaattgaaccataattga
tagcttgctcaaattaacttaaacagaggcaccgcaggcagctgttaaaa
agaaggctgttgggggctggagagatggctcagcagttaagagcactggc
tgctcttcctagaggtcccgagttcaattcccagcaaccacatggtagct
cacaaccacctgtaatggagtctgatgccctcttctagtgtgtatgaaga
catatacttaaattaaataaatttttttttaaaaaaagaaggctgttaag
tgaaattattcttataaaatgttgttatattgtgatactgttacagaaat
gttccattttgacacacacacacatacatatacatacgtatacatacaca
cacacacacacacacatataacatattatacacctatgcaaaggaaaaaa
gacctaggagtcttggtgatgcaggcttataattggaggtaggacagtga
aatcaaaggtaaggcctgctcacgctataagtgagttcaaggtcagcctg
ggcaatttagtgatgctctgtttgaaaacagaaagctaaaagggggggcc
cagagaaggtgatcaaagcctttccagcaacaagagcagagggagggaag
actcttttagtttgaggacagcctgacctacacagaaaatttccagacca
gttaaggattatagactgatgcttttgtgggagagtagggagggggtagt
gggggtc
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaaacatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgcttgcgaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcaagcttgtacaatcactttggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactattcagctattaaaaggaatgaatttatgaaattcctaggcaa
agggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccagcagtcttaccttgactgaactaacttacatcctcaga
ttttgttgtgttcttctctgactaaactagagataagcagcctatggagc
ctgagatcctgccccacccatcaaagctccttgtcaattatgactactcg
tcagcattattctgtgttataatgggaatgaggttttggttcactttggc
ttggtagaagaacttttcatagtggacactggaagttttttaactttaca
tcgagtctgaaatgtagtttttattctgttaaagtttgggctagttggga
aatctttatgtaaccagtaaaagttactttgttttttagatgaattttgt
tcaagctgcaatgtttactatgtaagttcctcacttggtgtctaagttcc
ttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_39499997_39500945
seq2: B6Ng01-210A13.b_43_998

seq1  GAATTCAGCATGGAGCTGGTGTGGGGACAAGTGAAGTACGACGATAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATGGAGCTGGTGTGGGGACAAGTGAAGTACGACGATAGGTA  50

seq1  ATATGTATAATTTTTAAAGAGACCATCAGAACTTCATTTTCACAGGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATAATTTTTAAAGAGACCATCAGAACTTCATTTTCACAGGAGTG  100

seq1  ACTGTGCACAAATGCTATTTAATAAGTGCTTGGGCTTTGAGATCCTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCACAAATGCTATTTAATAAGTGCTTGGGCTTTGAGATCCTCTTT  150

seq1  GAGCCAGCAATTCCACTTTTAAGAATTTAGCTGACAGGAATATTAGAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGCAATTCCACTTTTAAGAATTTAGCTGACAGGAATATTAGAGCC  200

seq1  AGGACTTGTGGCAACATCATTTGCAGTAACTAAAATTGAACCATAATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTGTGGCAACATCATTTGCAGTAACTAAAATTGAACCATAATTGA  250

seq1  TAGCTTGCTCAAATTAACTTAAACAGAGGCACCGCAGGCAGCTGTTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGCTCAAATTAACTTAAACAGAGGCACCGCAGGCAGCTGTTAAAA  300

seq1  AGAAGGCTGTTGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTGTTGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGGC  350

seq1  TGCTCTTCCTAGAGGTCCCGAGTTCAATTCCCAGCAACCACATGGTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCTAGAGGTCCCGAGTTCAATTCCCAGCAACCACATGGTAGCT  400

seq1  CACAACCACCTGTAATGGAGTCTGATGCCCTCTTCTAGTGTGTATGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCACCTGTAATGGAGTCTGATGCCCTCTTCTAGTGTGTATGAAGA  450

seq1  CATATACTTAAATTAAATAAATTTTTTTTTAAAAAAAGAAGGCTGTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTTAAATTAAATAAATTTTTTTTTAAAAAAAGAAGGCTGTTAAG  500

seq1  TGAAATTATTCTTATAAAATGTTGTTATATTGTGATACTGTTACAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTATTCTTATAAAATGTTGTTATATTGTGATACTGTTACAGAAAT  550

seq1  GTTCCATTTTGACACACACACACATACATATACATACGTATACATACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATTTTGACACACACACACATACATATACATACGTATACATACACA  600

seq1  CACACACACACACACATATAACATATTATACACCTATGCAAAGGAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACATATAACATATTATACACCTATGCAAAGGAAAAAA  650

seq1  GACCTAGGAGTCTTGGTGATGCAGGCTTATAATTGGAGGTAGGACAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGGAGTCTTGGTGATGCAGGCTTATAATTGGAGGTAGGACAGTGA  700

seq1  AATCAAAGGTAAGGCCTGCTCAGGCTATAAGTGAGTTCAAGGTCAGCCTG  750
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATCAAAGGTAAGGCCTGCTCACGCTATAAGTGAGTTCAAGGTCAGCCTG  750

seq1  GGCAATTTAGTGATGCTCTGTTTGAAAACAGAAAGCTAAAA-GGGGGGCC  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGCAATTTAGTGATGCTCTGTTTGAAAACAGAAAGCTAAAAGGGGGGGCC  800

seq1  CAG-GAAGGTGATCAAAGCCTTTCCAGCAACAAGAGCAGA-GGAAGGAGG  847
      ||| |||||||||||||||||||||||||||||||||||| ||| ||| |
seq2  CAGAGAAGGTGATCAAAGCCTTTCCAGCAACAAGAGCAGAGGGAGGGAAG  850

seq1  ACTCTTTTAGTTTGAGGACAGCCTGACCTACACAG-AAATTTCCAGACCA  896
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTCTTTTAGTTTGAGGACAGCCTGACCTACACAGAAAATTTCCAGACCA  900

seq1  GTT-AGGATTATAGACTGAAGCTTTTGTGGG-GAGTA-GGAGGTGGTAGT  943
      ||| ||||||||||||||| ||||||||||| ||||| ||||| ||||||
seq2  GTTAAGGATTATAGACTGATGCTTTTGTGGGAGAGTAGGGAGGGGGTAGT  950

seq1  GGGGGT  949
      ||||||
seq2  GGGGGT  956