BAC Information

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BAC

Clone NameB6Ng01-210D17
Chromosome6 (Build37)
Map Location 19,301,402 - 19,302,566
singlet/doubletsinglet
Overlap genenone
Upstream geneCttnbp2, EG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210D17.bB6Ng01-210D17.g
ACCGA028624GA028625
length1,170635
definitionB6Ng01-210D17.b B6Ng01-210D17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcattcattcattaaaattctatgtgatcaattataaaaaagt
atattaaaaatcatagttgaatatcaaaaaataaatcaatttttagttga
gttgtagtcctaaatatctttttgactctttactaatcataaaaatatta
agtagtatcacattggaaacaataatttaatttatggaaaattggcttat
taactttggtatcttctctgagattctggaaacaggattaacagaagcaa
aataaatgtggtttcacatgggcattttgttgagatagtagtcagatgtt
attaacttcagagctgtacaagttttcatagttataagaatactaaaaac
atacttagaaagtcctttgtatattctactataggcagcccccaaagtgg
agacagtttttatatatcttatttttctttttggtactggaaattggccc
cagtccatgtgaatgttagtgagtattataactgagttatatctgaactg
ctatgtttttaagacataggtcattgtgaatcccaggctgtccttgaact
ctaaattttcctctctttgcctctcaggtgctgaaattacaggtttctgc
cacctctccaggccaagtgttcctatcttgaaagtaacaatgtttcagca
cgtagccattcctatgtataatatgataaattaagtaatgaattattaaa
atgataaatatttacagaatgtgatgaaaattttaattcttattaattat
tatatacaatatttaaattgatataagtgcaagaaacaactgtttgtaaa
tgcttaaaactgtcctaagtagtttataattaatataatatgattgtatg
tcttttatttatcataaattgaaatacattgaagtgaatatttatatttc
ttattaatcatgaaaatgcgaacaggcacataatggttcaactgcttctc
aggactgtgagttaaatagtcagggagtcatgtttagttttcacatgtat
gtttgttttatattttacataaattatatttgacttatgaataggatgcc
tctagtaaacttatttcctgggaatgtattttttaaatacattatgatct
gtgcattgctgcaatatgtggaattcatttaggcaacatcaagaggacat
tgtagtaaattttctaggtg

gaattctagaaagtccttaatttcttcctttctttcttagctgaccttgt
gatgattgagtagagattttgttcagtttctgtgatttgttactgtgctt
gttgaagtccagccctaacacatgatgatctgataagatgcaagaggtta
tttcaatcttcttgaggcttactctgtgcttggttatatggctaattttg
gagaaggttctgtgaggtgctgagaaaaagaaataatcttttgtttttca
gtgaaatgttctgtagatatctgttggatccttttgtttcataacgtctt
catattcattatttttctttttaatttctgtttcaatgactgacctatcg
ttggtgataataggttagtgaaatccagcactattattgtgtggaatttt
atgtgtgatttgagctttagtaatatttcttttacaaacattagtgccct
tgcatttggggaatagatatttagcattgagaggccattgtttgaatttt
tgtttgatgagtatggactgtcttttttcatctttttggactacatttgg
ttgaaaagtatgtcattgcatattagaatggtgactccagcttgttcttg
gtttggttattttttggggggggaaatggagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19301402_19302566
seq2: B6Ng01-210D17.b_46_1215

seq1  GAATTCATCATTCATTCATTAAAATTCTATGTGATCAATTATAAAAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATTCATTCATTAAAATTCTATGTGATCAATTATAAAAAAGT  50

seq1  ATATTAAAAATCATAGTTGAATATCAAAAAATAAATCAATTTTTAGTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAAATCATAGTTGAATATCAAAAAATAAATCAATTTTTAGTTGA  100

seq1  GTTGTAGTCCTAAATATCTTTTTGACTCTTTACTAATCATAAAAATATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGTCCTAAATATCTTTTTGACTCTTTACTAATCATAAAAATATTA  150

seq1  AGTAGTATCACATTGGAAACAATAATTTAATTTATGGAAAATTGGCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTATCACATTGGAAACAATAATTTAATTTATGGAAAATTGGCTTAT  200

seq1  TAACTTTGGTATCTTCTCTGAGATTCTGGAAACAGGATTAACAGAAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTGGTATCTTCTCTGAGATTCTGGAAACAGGATTAACAGAAGCAA  250

seq1  AATAAATGTGGTTTCACATGGGCATTTTGTTGAGATAGTAGTCAGATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGTGGTTTCACATGGGCATTTTGTTGAGATAGTAGTCAGATGTT  300

seq1  ATTAACTTCAGAGCTGTACAAGTTTTCATAGTTATAAGAATACTAAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTCAGAGCTGTACAAGTTTTCATAGTTATAAGAATACTAAAAAC  350

seq1  ATACTTAGAAAGTCCTTTGTATATTCTACTATAGGCAGCCCCCAAAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAGAAAGTCCTTTGTATATTCTACTATAGGCAGCCCCCAAAGTGG  400

seq1  AGACAGTTTTTATATATCTTATTTTTCTTTTTGGTACTGGAAATTGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTTTTTATATATCTTATTTTTCTTTTTGGTACTGGAAATTGGCCC  450

seq1  CAGTCCATGTGAATGTTAGTGAGTATTATAACTGAGTTATATCTGAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCATGTGAATGTTAGTGAGTATTATAACTGAGTTATATCTGAACTG  500

seq1  CTATGTTTTTAAGACATAGGTCATTGTGAATCCCAGGCTGTCCTTGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTTTAAGACATAGGTCATTGTGAATCCCAGGCTGTCCTTGAACT  550

seq1  CTAAATTTTCCTCTCTTTGCCTCTCAGGTGCTGAAATTACAGGTTTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTTTCCTCTCTTTGCCTCTCAGGTGCTGAAATTACAGGTTTCTGC  600

seq1  CACCTCTCCAGGCCAAGTGTTCCTATCTTGAAAGTAACAATGTTTCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTCCAGGCCAAGTGTTCCTATCTTGAAAGTAACAATGTTTCAGCA  650

seq1  CGTAGCCATTCCTATGTATAATATGATAAATTAAGTAATGAATTATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCCATTCCTATGTATAATATGATAAATTAAGTAATGAATTATTAAA  700

seq1  ATGATAAATATTTACAGAATGTGATGAAAATTTTAATTCTTATTAATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAATATTTACAGAATGTGATGAAAATTTTAATTCTTATTAATTAT  750

seq1  TATATACAATATTTAAATTGATATAAGTGCAAGAAACAACTGTTTGTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAATATTTAAATTGATATAAGTGCAAGAAACAACTGTTTGTAAA  800

seq1  TGCTTAAAACTGTCCTAAGTAGTTTATAATTAATATAATATGATTGTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAAACTGTCCTAAGTAGTTTATAATTAATATAATATGATTGTATG  850

seq1  TCTTTTATTTATCATAAATTGAAATACATTGAAGTGAATATTTATATTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTTATCATAAATTGAAATACATTGAAGTGAATATTTATATTTC  900

seq1  TTATTAATCATGAAAATGCGAACAGGCACATAATGG-TCAACTGCTTCTC  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTATTAATCATGAAAATGCGAACAGGCACATAATGGTTCAACTGCTTCTC  950

seq1  AGGACTGTGAGTTAAATAGTCAGGGAGTCATGTTTAGTTTTCACAATGTA  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGGACTGTGAGTTAAATAGTCAGGGAGTCATGTTTAGTTTTCAC-ATGTA  999

seq1  TGTTTGTTTTTTATATTTTACATAAATTATATTTGACTTATGAATAGGAT  1049
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTG--TTTTATATTTTACATAAATTATATTTGACTTATGAATAGGAT  1047

seq1  G-CTCTAGTAAACTTATTTCCT-GGAATGTA-TTTTTAAATACAATTATG  1096
      | |||||||||||||||||||| |||||||| ||||||||||| ||||||
seq2  GCCTCTAGTAAACTTATTTCCTGGGAATGTATTTTTTAAATAC-ATTATG  1096

seq1  ATCTGTGCATTGCTGC-ATATGTG--AATCA-TTAGGCAACATCAAGA-G  1141
      |||||||||||||||| |||||||  | ||| |||||||||||||||| |
seq2  ATCTGTGCATTGCTGCAATATGTGGAATTCATTTAGGCAACATCAAGAGG  1146

seq1  ACATGTAATTAAATTTCTTAGGTG  1165
      ||||   | |||||||  ||||||
seq2  ACATTGTAGTAAATTTTCTAGGTG  1170


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