BAC Information

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BAC

Clone NameB6Ng01-210J24
Chromosome6 (Build37)
Map Location 42,922,245 - 42,923,336
singlet/doubletsinglet
Overlap genenone
Upstream geneSval3, Sva, Tas2r139, Tas2r144, Gstk1, Tmem139, Casp2, Clcn1, 6330503C03Rik, Zyx, Epha1, Tas2r143, Tas2r135, Tas2r126, Olfr458, Olfr457, Olfr456, LOC232745, EG546896, Eapa2, BC011487, 3321401G04Rik, LOC100039918, GA_x5J8B7W6337-801345-802245, Olfr453, Olfr38, Olfr452, Olfr451-ps1, Olfr450, Olfr449, Olfr448, Olfr447, Olfr446, GA_x5J8B7W6337-1014614-1015483, Olfr444
Downstream geneEG622841, Igk-V, Olfr443-ps1, GA_x5J8B7W6337-1183223-1183810, Olfr441, Olfr440-ps1, GA_x5J8B7W6337-1221999-1222591, Olfr438, Olfr437, Olfr13, GA_x5J8B7W6337-1270568-1271367, Olfr435, Olfr434, LOC665745, Olfr47, Arhgef5, Nobox, Tpk1, LOC665747, LOC546897, LOC665779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210J24.bB6Ng01-210J24.g
ACCGA028919GA028920
length3971,086
definitionB6Ng01-210J24.b B6Ng01-210J24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgtagaagagggggagaaatgactgagggaatcagagaggtcaatgacac
cacaaaataacctacataattaattaacctgggaccattgttgtacatag
agactgaaccaccaacaaaagagatgcatgggatagacctagcccctcta
aacttatgtaacatatgtgcagtttggtcttcatgtaggacccctaacag
caggagaaactcttttgcctgtgtttggattctttcccctaactgggatg
ccttgtctaaccttgataggagaagatgtgcctagtcctactgcaacttg
gtatgccaaggtgagttaatactaatgggagtcatcacctgctctgaaga
gaaaggaagagtaggtatgaaggaaggtgatgggagagggaagatat
gaattcaaggcccatacctaaacctaataaaagcaatgttcttttttctt
ttcattattgattccttgagaacttcttaggtgtcttttgatcatagtta
ttcatccacaacctaataatcacttccctattcaccatatcctgtttctt
gacttattttgttccatttaagatgtattatgtttatagggtctcctaat
atgtgtgatcaatgagacagtgatttaaatgaaagaaagtagtcatagta
gagaaatatgaggtgtgttatgccctcagtcctgaaataccttcatttcc
aatttgagaagaaacaagaaactcgaattttatagactgacctaaagagg
gattcagcatatggtatatggcaaacaaaacaagatcagagactgacaga
atggccaactaataatcaggacaacgagacacatcccatgggcaaacacc
aatccctgctctattagtgttactttgctatgcttgcagagtacatcata
aatgaaaacagaaggaacagaatatgggattacattgaatgaatacaaac
ttatatatcctagaaagaggaggaaaatgtcagtaagaagatatttttac
atgtgtttattatgtgtttgtatgtacgaatattagttcattccaatgca
tacacatgaaagacagacacaactgaagggagtcagtcctccctgcaatg
ttggtctagggaaaacatcaggctgtttggcttggtagctggaatgtctg
tggtgagattgtctgaatttaataatagatgtgctaaggaccaacatgag
gttaacagtggcaccacctgaccacaaaggcctgagttgcttaagaaatt
aagtagcttggatccatcccataaacaaccaccaaacccaggcattattg
catataccaacagattttgctgacaggaccctgatatagctgtctactct
gagactatgccagtgctggcaaatagaagagtgatgctcatagtcatcta
tggatggatcacagggtccgcgatggaggagtagagaaagtacccatgag
cctgagggtatgcaaccctataggagaaacaacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_42922245_42923336
seq2: B6Ng01-210J24.g_65_1150 (reverse)

seq1  TTTGTTGTTTCTCCTATAGGGTTGCATACCCCTTCAGCTCCTTGGGTACT  50
      |||||||||||||||||||||||||||||||  ||||   | ||||||||
seq2  TTTGTTGTTTCTCCTATAGGGTTGCATACCC--TCAGGCTCATGGGTACT  48

seq1  TTCTCTAACTCCTTCATCGCGGACCCTGTGATCCATCCAATAGATGACTA  100
      |||||| |||||| |||||||||||||||||||||||| |||||||||||
seq2  TTCTCT-ACTCCTCCATCGCGGACCCTGTGATCCATCC-ATAGATGACTA  96

seq1  TGAGCATCCACTTCTCTATTTGCCAGCCACTGGCATAGTCTCAGAGTAGA  150
      ||||||| ||||  |||||||||||| |||||||||||||||||||||||
seq2  TGAGCAT-CACTCTTCTATTTGCCAG-CACTGGCATAGTCTCAGAGTAGA  144

seq1  CAGCTATATCAGGGTCCTGTCAGCAAAATCTTGTTGGTATATGCAATAAT  200
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGCTATATCAGGGTCCTGTCAGCAAAATC-TGTTGGTATATGCAATAAT  193

seq1  GCCTGGGTTTGGTGGTTGTTTATGGGATGGATCCAAGCTACTTAATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGTTTGGTGGTTGTTTATGGGATGGATCCAAGCTACTTAATTTCT  243

seq1  TAAGCAACTCAGGCCTTTGTGGTCAGGTGGTGCCACTGTTAACCTCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAACTCAGGCCTTTGTGGTCAGGTGGTGCCACTGTTAACCTCATGT  293

seq1  TGGTCCTTAGCACATCTATTATT-AATTCAGACAATCTCACCACAGACAT  349
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGGTCCTTAGCACATCTATTATTAAATTCAGACAATCTCACCACAGACAT  343

seq1  TCCAGCTACCAAGCCAAACAGCCTGATGTTTTCCCTAGACCAACATTGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTACCAAGCCAAACAGCCTGATGTTTTCCCTAGACCAACATTGCA  393

seq1  GGGAGGACTGACTCCCTTCAGTTGTGTCTGTCTTTCATGTGTATGCATTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGACTGACTCCCTTCAGTTGTGTCTGTCTTTCATGTGTATGCATTG  443

seq1  GAATGAACTAATATTCGTACATACAAACACATAATAAACACATGTAAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAACTAATATTCGTACATACAAACACATAATAAACACATGTAAAAA  493

seq1  TATCTTCTTACTGACATTTTCCTCCTCTTTCTAGGATATATAAGTTTGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTTACTGACATTTTCCTCCTCTTTCTAGGATATATAAGTTTGTA  543

seq1  TTCATTCAATGTAATCCCATATTCTGTTCCTTCTGTTTTCATTTATGATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCAATGTAATCCCATATTCTGTTCCTTCTGTTTTCATTTATGATG  593

seq1  TACTCTGCAAGCATAGCAAAGTAACACTAATAGAGCAGGGATTGGTGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCAAGCATAGCAAAGTAACACTAATAGAGCAGGGATTGGTGTTT  643

seq1  GCCCATGGGATGTGTCTCGTTGTCCTGATTATTAGTTGGCCATTCTGTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGGGATGTGTCTCGTTGTCCTGATTATTAGTTGGCCATTCTGTCA  693

seq1  GTCTCTGATCTTGTTTTGTTTGCCATATACCATATGCTGAATCCCTCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGATCTTGTTTTGTTTGCCATATACCATATGCTGAATCCCTCTTT  743

seq1  AGGTCAGTCTATAAAATTCGAGTTTCTTGTTTCTTCTCAAATTGGAAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGTCTATAAAATTCGAGTTTCTTGTTTCTTCTCAAATTGGAAATG  793

seq1  AAGGTATTTCAGGACTGAGGGCATAACACACCTCATATTTCTCTACTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATTTCAGGACTGAGGGCATAACACACCTCATATTTCTCTACTATG  843

seq1  ACTACTTTCTTTCATTTAAATCACTGTCTCATTGATCACACATATTAGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTCTTTCATTTAAATCACTGTCTCATTGATCACACATATTAGGA  893

seq1  GACCCTATAAACATAATACATCTTAAATGGAACAAAATAAGTCAAGAAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTATAAACATAATACATCTTAAATGGAACAAAATAAGTCAAGAAAC  943

seq1  AGGATATGGTGAATAGGGAAGTGATTATTAGGTTGTGGATGAATAACTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATGGTGAATAGGGAAGTGATTATTAGGTTGTGGATGAATAACTAT  993

seq1  GATCAAAAGACACCTAAGAAGTTCTCAAGGAATCAATAATGAAAAGAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAAGACACCTAAGAAGTTCTCAAGGAATCAATAATGAAAAGAAAA  1043

seq1  AAGAACATTGCTTTTATTAGGTTTAGGTATGGGCCTTGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATTGCTTTTATTAGGTTTAGGTATGGGCCTTGAATTC  1086