BAC Information

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BAC

Clone NameB6Ng01-211K17
Chromosome6 (Build37)
Map Location 84,115,761 - 84,116,841
singlet/doubletsinglet
Overlap geneDysf
Upstream geneDctn1, C330016K18Rik, Mthfd2, Mobk1b, Bola3, D230004J03Rik, Dguok, Actg2, Stambp, LOC664956, Clec4f, Cd207, Vax2os2, Vax2os1, Vax2, Atp6v1b1, 1700124L16Rik, Ankrd53, Tex261, LOC665004, Nagk, Paip2b, LOC384450, LOC622683, LOC380687, LOC665098, LOC676366, Zfml, LOC665114
Downstream gene4930504D19Rik, Cyp26b1, Exoc6b, LOC665129, Npm3-ps1, EG545861, EG623016, Spr, LOC665086, LOC665089
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211K17.bB6Ng01-211K17.g
ACCGA029671GA029672
length1,0721,104
definitionB6Ng01-211K17.b B6Ng01-211K17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccttaaagagatagtctctctggccatctatcccttgcttcag
ggaagatgagtggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgttttgtgtttggcacatgtgttaggtgcagagtgtgcggcccgc
acttttgccatggtagcgtaggcttttgctgcagtggaggcgggacaatc
tcctcagattcggtttgccgctctaaaagaaattatgctgcattatgccg
tggggtgcgaggctaagcactgcacagaggatagcttgctgttggcatcc
tgtggaaggcacgtctgattgcatgaaggttcagtgtcctagttcccttc
ccccaagaaaaacgacacgggagctggccaagacctctctgggtgatgag
cctaagggatggttttgtgtagggcccctatgcttgcacactggggatca
gacctctaccttcacccatgaggcttgcttgcagcaattaagatctggcc
atagattatcaacatcctggccttttgatgcacctgccacaagcaaaaca
caatctccccaggtgtggcttggcatgatagagaggtagtcagtgataag
actccctgggcatgtcaccaacctaagacagggatcaaaccaatgctgtt
tgtcacccaaggacgggtaaggggcatggctgcggggggctatctacaga
cattctctctgccaaaaaagaaaaaagggggaattgtggggagcgggtgt
ggcggcagtcccaaaggtgctagagactgcagctaagtcatatgacttgc
acctgacttcctcatataagacacaaacatcttgagtgctgcgcagttgt
accaggattcaggtgaatccaaatttggtggagatttgccccttgctgcc
ctgattagctgaagctgcgtgcctggtgaggtggccgtggtctgctgtgc
gtggatgtgaactgagagtttagagagtgagaggcccgggttaggaggga
ggattattctttccgagagaggatttactattatgggggagatatattaa
acaaggggagattcaacagggg
gaattcaggctgtccatggagaaagggaccttgatgtaaatgagtgctag
gtcaggacaaggagaggaaaaaccacctcaggaggaaagaatgtcctctc
gtagaggactcactgctaagtgagaagaatgtggggacagaaaatgagag
aaacacgtgagccatcctgaaggagtgggaaaagaggttggctttgaata
ctgatcccgtttatgcacgcatggtcagggaagcaaggctccaagcaata
aaactgtccccacgtttgaagagacatgtgcctgtcactcttggtcagct
gtcattaagtttctagcctatccctaaacacaagttgcctctctacttgc
tgagctacagggagttcatgagctagaccagtacccacagtctccggacc
caaaagccatggctctctctgcacatgcaagctggcactattcacataga
tgcttgaacaccacaaactttagagtctactcaagcaacactgtaggaag
tttcctcaagtaatatccctgcccagatggcctagtgtagaaggtcaatc
ctgcttcgcttaggaaactcttccatggggatgcatgagcaaggacctgt
ggctctgactttgccagctactgctggctgccgcagtgaacacagtggtc
ttcggctcacagaaaagcccatggtaggtgcttgtggttctgggttcctc
ctcatttctcccagtctgttagattcccagctggcaaagtagaagtctag
caactctaaaccatttccatctttccttgatctgaaatggcttttgttaa
aaaaggaaaaaaaaaaaaaaaggtctgtgcatttcacaggcagaattttc
cttagggttctgtcttcccagtgctttgctcaagcaagaatggccccctt
gttaggctaaagcaaatgacaggaagatggctctttgggggtccaaacaa
gggggaaacaatattaagggaagaaaaaaaaaatgttttcccctcagcca
agcacctgaaggctcacccagaagaaactccattgccttttgtttcatgt
ttcgtagaagattggtagaagatgcccactagacagggaattcatagtgc
aggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_84115761_84116841
seq2: B6Ng01-211K17.g_71_1174 (reverse)

seq1  CCCTGCACTCTG-ATTTCCTGTCT-GT-GGCATCTTCT-CCAATCTTCCT  46
      ||||||||| || ||| ||||||| || |||||||||| |||||||| ||
seq2  CCCTGCACTATGAATTCCCTGTCTAGTGGGCATCTTCTACCAATCTT-CT  49

seq1  ACG-AACATG-AACAAA--GCCATTGGTTTTCTTCTGGTTTAGCC-TCAG  91
      ||| |||||| ||||||  || || |  |||||||||| | |||| ||||
seq2  ACGAAACATGAAACAAAAGGCAATGGAGTTTCTTCTGGGTGAGCCTTCAG  99

seq1  GTCTTTGGCT--GGGGGAAACA-TTTTTTTTTCT--CCCTCATATTGTTT  136
      ||  ||||||  |||| ||||| |||||||||||  || | |||||||||
seq2  GTGCTTGGCTGAGGGGAAAACATTTTTTTTTTCTTCCCTTAATATTGTTT  149

seq1  CCCCCTTTGTTTTGACCCCCAA--GGCCATCTTCCTGTCATTTGC-TTAG  183
      ||||| |||||| |||||||||   |||||||||||||||||||| ||||
seq2  CCCCC-TTGTTTGGACCCCCAAAGAGCCATCTTCCTGTCATTTGCTTTAG  198

seq1  CCTTAC-AGGGGGCCATTCTTGCTTG-GC-AAGCACT-GGAAGACAGAA-  228
      ||| || ||||||||||||||||||| || ||||||| ||||||||||| 
seq2  CCTAACAAGGGGGCCATTCTTGCTTGAGCAAAGCACTGGGAAGACAGAAC  248

seq1  CCTAAGGAAAATTCTGCCTGTG-AATGCACAGACC--TTTTTTTTTTTTT  275
      |||||||||||||||||||||| ||||||||||||  |||||||||||||
seq2  CCTAAGGAAAATTCTGCCTGTGAAATGCACAGACCTTTTTTTTTTTTTTT  298

seq1  CCTTTTTTAACAAAAGCCATTTCAGATCAAAGAAAGATGGAAATGGTTTA  325
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTTTTTTAACAAAAGCCATTTCAGATCAAGGAAAGATGGAAATGGTTTA  348

seq1  GAGTTGCTAGACTTCTACTTTGCCAGCTGGGAATCTAACAGACTGGGAGA  375
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCTAGACTTCTACTTTGCCAGCTGGGAATCTAACAGACTGGGAGA  398

seq1  AATGAGGAGGAACCCAGAACCACAAGCACCTACCATGGGCTTTTCTGTGA  425
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGAGGAACCCAGAACCACAAGCACCTACCATGGGCTTTTCTGTGA  448

seq1  GCCGAAGACCACTGTGTTCACTGCGGCAGCCAGCAGTAGCTGGCAAAGTC  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAAGACCACTGTGTTCACTGCGGCAGCCAGCAGTAGCTGGCAAAGTC  498

seq1  AGAGCCACAGGTCCTTGCTCATGCATCCCCATGGAAGAGTTTCCTAAGCG  525
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACAGGTCCTTGCTCATGCATCCCCATGGAAGAGTTTCCTAAGCG  548

seq1  AAGCAGGATTGACCTTCTACACTAGGCCATCTGGGCAGGGATATTACTTG  575
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGATTGACCTTCTACACTAGGCCATCTGGGCAGGGATATTACTTG  598

seq1  AGGAAACTTCCTACAGTGTTGCTTGAGTAGACTCTAAAGTTTGTGGTGTT  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTTCCTACAGTGTTGCTTGAGTAGACTCTAAAGTTTGTGGTGTT  648

seq1  CAAGCATCTATGTGAATAGTGCCAGCTTGCATGTGCAGAGAGAGCCATGG  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATCTATGTGAATAGTGCCAGCTTGCATGTGCAGAGAGAGCCATGG  698

seq1  CTTTTGGGTCCGGAGACTGTGGGTACTGGTCTAGCTCATGAACTCCCTGT  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGTCCGGAGACTGTGGGTACTGGTCTAGCTCATGAACTCCCTGT  748

seq1  AGCTCAGCAAGTAGAGAGGCAACTTGTGTTTAGGGATAGGCTAGAAACTT  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGCAAGTAGAGAGGCAACTTGTGTTTAGGGATAGGCTAGAAACTT  798

seq1  AATGACAGCTGACCAAGAGTGACAGGCACATGTCTCTTCAAACGTGGGGA  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGCTGACCAAGAGTGACAGGCACATGTCTCTTCAAACGTGGGGA  848

seq1  CAGTTTTATTGCTTGGAGCCTTGCTTCCCTGACCATGCGTGCATAAACGG  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTATTGCTTGGAGCCTTGCTTCCCTGACCATGCGTGCATAAACGG  898

seq1  GATCAGTATTCAAAGCCAACCTCTTTTCCCACTCCTTCAGGATGGCTCAC  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTATTCAAAGCCAACCTCTTTTCCCACTCCTTCAGGATGGCTCAC  948

seq1  GTGTTTCTCTCATTTTCTGTCCCCACATTCTTCTCACTTAGCAGTGAGTC  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTCTCATTTTCTGTCCCCACATTCTTCTCACTTAGCAGTGAGTC  998

seq1  CTCTACGAGAGGACATTCTTTCCTCCTGAGGTGGTTTTTCCTCTCCTTGT  1025
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACGAGAGGACATTCTTTCCTCCTGAGGTGGTTTTTCCTCTCCTTGT  1048

seq1  CCTGACCTAGCACTCATTTACATCAAGGTCCCTTTCTCCATGGACAGCCT  1075
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTAGCACTCATTTACATCAAGGTCCCTTTCTCCATGGACAGCCT  1098

seq1  GAATTC  1081
      ||||||
seq2  GAATTC  1104