BAC Information

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BAC

Clone NameB6Ng01-212B22
Chromosome6 (Build37)
Map Location 67,910,734 - 68,020,138
singlet/doubletdoublet
Overlap geneIgk, Igkv1-122, EG667435, EG434025, Igkv9-119, Igkv14-118-2
Upstream geneGng12, LOC100042837, Gadd45a, E230016M11Rik, EG667310, LOC667318, Serbp1, Il12rb2, LOC667324, EG667326, LOC672137, EG209589, LOC100042890, Il23r, Tacstd2, Igkv2-137, 4930515G16Rik, Igkv1-136, Igkv1-135, LOC723992, EG628006, Igkv14-134-1, Igkv17-134, EG628027, LOC384401, EG628042, EG243423, EG628056, EG628072, Igkv9-129, Igkv9-128, EG243433, Igkv14-126-1, LOC723993, EG628127, ENSMUSG00000050218, EG243431, EG628144
Downstream geneIgkv14-118-1, EG384405, Igkv11-118, Igkv1-117, EG434026, EG628206, Igkv11-114, Igkv2-113, LOC232047, EG381776, Igkv14-111, Igkv1-110, Igkv2-109, Igkv1-108, Igkv2-107, Igkv11-106, Igkv2-105, LOC384408, Gm1067, Igkv15-103, Igkv15-102, Igkv20-101-2, Igkv15-101-1, Igkv15-101, Igkv14-100, Igkv1-99, Igkv12-98, Igkv15-97, Igkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498, Igkv4-78
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212B22.bB6Ng01-212B22.g
ACCGA029999GA030000
length1,1281,168
definitionB6Ng01-212B22.b B6Ng01-212B22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,019,005 - 68,020,138)(67,910,734 - 67,911,892)
sequence
gaattcttccagaagtaactagaactaagtgcttaaatgtttctcattta
gtaaaatggtgaactggggttcttcagtatcaagaacttctatttgtagg
caaagaaaagctaattcttcttgcacacaccttggaaatgatatagaata
taataggccaatataatttgtacatattgtgcaaggatttttctgtagtg
cttgctatgagttagggaaggggtggtgacaccagtgcgttttgtgttgg
cattgcaggtgcatacacgattaaggttctgaaaacacagactatttaca
caatgggtatgcttagagaaactgcacacacacacacacacacacagaca
cacacacacacacacacacaaacacacacaacatccactgaggcaaataa
atgcaaatgagctcattaataatataaaaactctttcaatttcctcattt
attataaaagatatcaacccaagagaagcttgtgtgcaaagtggagaagt
tactgcctataaatttttgacaacttcctatgagtgtacaactatttgaa
aatagagaaattcaacggtcttctggaaacagtgacttgagttgcaattc
tctcataaaaccccaagagctatatctccctctcctggaggaaatccagg
ccatctctccagcacattttgaagagatcaggaatgggacagtttgtgct
tataagaagagtcccaccgaaaatgtgaatctctaacacccaaaaccaag
atatctgccgaaatgaatcaagacattatttaaatggatcaatttggcaa
agatattttagatttagatggttaaaattttcttgtatcataaaatatct
tggtttctccgtttatggtgattaatatttttgatgggtagagtgatctg
agcttgcacctgtggtattttcggtctgtaagacatctgttcaagatatt
ctggcttttagagcctctgttgaaatgtctgctcttgttcctacatgtct
gcactatatgtaacttggccttttcacttacagtatttatattcttcttg
tctgtgtatttagcaacttgaattttcatgtggtggaaactattttcttt
cctgatccaatctattgatgtcatatga
gaattcatgacaattttgagtttattttgtgtgaatctagtctgggctac
atatagagatcatgtctcaataacaaaagaaataaaaaggcagaaaatga
gcttcaactgacaatggaacattataaagatacccatttctaatatatac
attacaatgagctcttggaggaaatatctttgagtccaaaatagttgtat
tctccatttctccaacacaagatcaattgggagtgcctgtatagttgtac
aaagctcccaaccctatgacagacaggaggcaagagagtgagtgaaccag
agagtgaggacacaataagcccccaggtctatgaacttagggtcatatag
tctaattcagtaatcttccttcagagcgcacagactgcaaaagcaatatc
acctgaggaagaagatttcatgcaacaacctgggacacactatagacctg
aatgtaactcttgaattagatatatctataacatttttgctgtctgtata
ggtgagaatctaactattaatactctggatgagaccaatattttctacat
ttttcttttctgtatttgacaatattcattcacgcacaaccaaattctcc
aaaaataatcaattctctatttactttatcctccttttcttgacatattt
tgttccatttaagacatgttaggtttagaggatctcctaatatgtggagt
caatgagtcagacatttaaaagaagaaaagtagccacagtagaaaaatat
taggtgtgctatgccttcagtcttaaactagcttcatttccagtttgtga
agaatcaagagactcatgttttatagactggcctccagagcaattcagca
tatggtatatgaccaacaaaacaagatgttctttactttattctaattct
cattttgttctttatagcatccaatagatttgagtcatctactggagaat
ttgttatgccttaagccaaagaaccctatagaaatccagaattatacatg
cattcaaatcccaccccctagcaccaatgaaaccatgtacttttgataaa
ctttttgtgttgttctattaaacacaatatagccacagaatgtttcctca
ggcttttaataagatgttaccatgttagaagttaatctgaccagtaaggt
attatcaactgatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_68019005_68020138
seq2: B6Ng01-212B22.b_46_1173 (reverse)

seq1  TCATATAGAACATCAAATAGATTGATCCAGAAAAGAAAATAG-TTCCACC  49
      ||||||   ||||| |||||||||   ||| ||||||||||| |||||||
seq2  TCATAT--GACATC-AATAGATTGGATCAGGAAAGAAAATAGTTTCCACC  47

seq1  ACATGAAAA-TCAAGGTGCTAAATACACAGAACAAAGAAAGAATATTAAA  98
      ||||||||| ||||| |||||||||||||| ||||   ||||||| ||||
seq2  ACATGAAAATTCAAGTTGCTAAATACACAG-ACAA--GAAGAATA-TAAA  93

seq1  TACTGTAAGTGAAAAGGCCAAGTTACATATAAGTGCAGACATGTAGGAAC  148
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TACTGTAAGTGAAAAGGCCAAGTTACATAT-AGTGCAGACATGTAGGAAC  142

seq1  AAGAGCAGACATTTCAACAGAGGCTCTAAAAGCCAGAATATCTTGAACAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGACATTTCAACAGAGGCTCTAAAAGCCAGAATATCTTGAACAG  192

seq1  ATGTCTTACAGACCGAAAATACCACAGGTGCAAGCTCAGATCACTCTACC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTACAGACCGAAAATACCACAGGTGCAAGCTCAGATCACTCTACC  242

seq1  CATCAAAAATATTAATCACCATAAACGGAGAAACCAAGATATTTTATGAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAAATATTAATCACCATAAACGGAGAAACCAAGATATTTTATGAT  292

seq1  ACAAGAAAATTTTAACCATCTAAATCTAAAATATCTTTGCCAAATTGATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAATTTTAACCATCTAAATCTAAAATATCTTTGCCAAATTGATC  342

seq1  CATTTAAATAATGTCTTGATTCATTTCGGCAGATATCTTGGTTTTGGGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAATAATGTCTTGATTCATTTCGGCAGATATCTTGGTTTTGGGTG  392

seq1  TTAGAGATTCACATTTTCGGTGGGACTCTTCTTATAAGCACAAACTGTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGATTCACATTTTCGGTGGGACTCTTCTTATAAGCACAAACTGTCC  442

seq1  CATTCCTGATCTCTTCAAAATGTGCTGGAGAGATGGCCTGGATTTCCTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGATCTCTTCAAAATGTGCTGGAGAGATGGCCTGGATTTCCTCC  492

seq1  AGGAGAGGGAGATATAGCTCTTGGGGTTTTATGAGAGAATTGCAACTCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGGAGATATAGCTCTTGGGGTTTTATGAGAGAATTGCAACTCAA  542

seq1  GTCACTGTTTCCAGAAGACCGTTGAATTTCTCTATTTTCAAATAGTTGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTTTCCAGAAGACCGTTGAATTTCTCTATTTTCAAATAGTTGTA  592

seq1  CACTCATAGGAAGTTGTCAAAAATTTATAGGCAGTAACTTCTCCACTTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATAGGAAGTTGTCAAAAATTTATAGGCAGTAACTTCTCCACTTTG  642

seq1  CACACAAGCTTCTCTTGGGTTGATATCTTTTATAATAAATGAGGAAATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGCTTCTCTTGGGTTGATATCTTTTATAATAAATGAGGAAATTG  692

seq1  AAAGAGTTTTTATATTATTAATGAGCTCATTTGCATTTATTTGCCTCAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTTTTATATTATTAATGAGCTCATTTGCATTTATTTGCCTCAGT  742

seq1  GGATGTTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTG  792

seq1  TGTGTGTGTGTGCAGTTTCTCTAAGCATACCCATTGTGTAAATAGTCTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGCAGTTTCTCTAAGCATACCCATTGTGTAAATAGTCTGT  842

seq1  GTTTTCAGAACCTTAATCGTGTATGCACCTGCAATGCCAACACAAAACGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGAACCTTAATCGTGTATGCACCTGCAATGCCAACACAAAACGC  892

seq1  ACTGGTGTCACCACCCCTTCCCTAACTCATAGCAAGCACTACAGAAAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGTCACCACCCCTTCCCTAACTCATAGCAAGCACTACAGAAAAAT  942

seq1  CCTTGCACAATATGTACAAATTATATTGGCCTATTATATTCTATATCATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCACAATATGTACAAATTATATTGGCCTATTATATTCTATATCATT  992

seq1  TCCAAGGTGTGTGCAAGAAGAATTAGCTTTTCTTTGCCTACAAATAGAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGTGTGTGCAAGAAGAATTAGCTTTTCTTTGCCTACAAATAGAAG  1042

seq1  TTCTTGATACTGAAGAACCCCAGTTCACCATTTTACTAAATGAGAAACAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATACTGAAGAACCCCAGTTCACCATTTTACTAAATGAGAAACAT  1092

seq1  TTAAGCACTTAGTTCTAGTTACTTCTGGAAGAATTC  1134
      ||||||||||||||||||||||||||||||||||||
seq2  TTAAGCACTTAGTTCTAGTTACTTCTGGAAGAATTC  1128

seq1: chr6_67910734_67911892
seq2: B6Ng01-212B22.g_68_1235

seq1  GAATTCATGACAATTTTGAGTTTATTTTGTGTGAATCTAGTCTGGGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGACAATTTTGAGTTTATTTTGTGTGAATCTAGTCTGGGCTAC  50

seq1  ATATAGAGATCATGTCTCAATAACAAAAGAAATAAAAAGGCAGAAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAGATCATGTCTCAATAACAAAAGAAATAAAAAGGCAGAAAATGA  100

seq1  GCTTCAACTGACAATGGAACATTATAAAGATACCCATTTCTAATATATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAACTGACAATGGAACATTATAAAGATACCCATTTCTAATATATAC  150

seq1  ATTACAATGAGCTCTTGGAGGAAATATCTTTGAGTCCAAAATAGTTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATGAGCTCTTGGAGGAAATATCTTTGAGTCCAAAATAGTTGTAT  200

seq1  TCTCCATTTCTCCAACACAAGATCAATTGGGAGTGCCTGTATAGTTGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTTCTCCAACACAAGATCAATTGGGAGTGCCTGTATAGTTGTAC  250

seq1  AAAGCTCCCAACCCTATGACAGACAGGAGGCAAGAGAGTGAGTGAACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCCCAACCCTATGACAGACAGGAGGCAAGAGAGTGAGTGAACCAG  300

seq1  AGAGTGAGGACACAATAAGCCCCCAGGTCTATGAACTTAGGGTCATATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGGACACAATAAGCCCCCAGGTCTATGAACTTAGGGTCATATAG  350

seq1  TCTAATTCAGTAATCTTCCTTCAGAGCGCACAGACTGCAAAAGCAATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCAGTAATCTTCCTTCAGAGCGCACAGACTGCAAAAGCAATATC  400

seq1  ACCTGAGGAAGAAGATTTCATGCAACAACCTGGGACACACTATAGACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGGAAGAAGATTTCATGCAACAACCTGGGACACACTATAGACCTG  450

seq1  AATGTAACTCTTGAATTAGATATATCTATAACATTTTTGCTGTCTGTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAACTCTTGAATTAGATATATCTATAACATTTTTGCTGTCTGTATA  500

seq1  GGTGAGAATCTAACTATTAATACTCTGGATGAGACCAATATTTTCTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAATCTAACTATTAATACTCTGGATGAGACCAATATTTTCTACAT  550

seq1  TTTTCTTTTCTGTATTTGACAATATTCATTCACGCACAACCAAATTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCTGTATTTGACAATATTCATTCACGCACAACCAAATTCTCC  600

seq1  AAAAATAATCAATTCTCTATTTACTTTATCCTCCTTTTCTTGACATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATCAATTCTCTATTTACTTTATCCTCCTTTTCTTGACATATTT  650

seq1  TGTTCCATTTAAGACATGTTAGGTTTAGAGGATCTCCTAATATGTGGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCATTTAAGACATGTTAGGTTTAGAGGATCTCCTAATATGTGGAGT  700

seq1  CAATGAGTCAGACATTTAAAAGAAGAAAAGTAGCCACAGTAGAAAAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGTCAGACATTTAAAAGAAGAAAAGTAGCCACAGTAGAAAAATAT  750

seq1  TAGGTGTGCTATGCCTTCAGTCTTAAACTAGCTTCATTTCCAGTTTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTGCTATGCCTTCAGTCTTAAACTAGCTTCATTTCCAGTTTGTGA  800

seq1  AGAATCAAGAGACTCATGTTTTATAGACTGGCCTCCAGAGCAATTCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAAGAGACTCATGTTTTATAGACTGGCCTCCAGAGCAATTCAGCA  850

seq1  TATGGTATATGACCAACAAAACAAGATGTTC-TTACTTTATTCTAATTCT  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATGGTATATGACCAACAAAACAAGATGTTCTTTACTTTATTCTAATTCT  900

seq1  CATTTTGTTCTTTATAGCATCCAATAGATTTGAGTCATCTACTGGAGAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTTCTTTATAGCATCCAATAGATTTGAGTCATCTACTGGAGAAT  950

seq1  T--GTATGCC-TAAG-CAAAGAA-CCTATAGAAATCCAGA--TATACATG  992
      |   |||||| |||| ||||||| ||||||||||||||||  ||||||||
seq2  TTGTTATGCCTTAAGCCAAAGAACCCTATAGAAATCCAGAATTATACATG  1000

seq1  CATTCAAATCCCA-CCCCTAGCACCAATG-AACCATGTAACTTTTGATAA  1040
      ||||||||||||| ||||||||||||||| |||||||| |||||||||||
seq2  CATTCAAATCCCACCCCCTAGCACCAATGAAACCATGT-ACTTTTGATAA  1049

seq1  AC-TTTTGTG-TGTTCTAATAAAAACACAAAATATAG-CACAG-ATGTT-  1085
      || ||||||| ||||||| |||    ||| ||||||| ||||| ||||| 
seq2  ACTTTTTGTGTTGTTCTATTAA----ACACAATATAGCCACAGAATGTTT  1095

seq1  -CTCA-GTTTTTAATAAGATGGTTACCATG-TAG-AGTAAATTCTAAAAA  1131
       |||| | |||||||||||| ||||||||| ||| ||| || |||   | 
seq2  CCTCAGGCTTTTAATAAGAT-GTTACCATGTTAGAAGTTAA-TCT--GAC  1141

seq1  CATTTAGGTATTTATTAATTGATTTTTT  1159
      || | ||||| |||| || |||||||||
seq2  CAGTAAGGTA-TTATCAACTGATTTTTT  1168