BAC Information

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BAC

Clone NameB6Ng01-212H20
Chromosome6 (Build37)
Map Location 119,156,471 - 119,343,476
singlet/doubletdoublet
Overlap geneDcp1b, Cacna2d4, Lrtm2, Adipor2
Upstream gene1700069P05Rik, Bms1, Zfp248, Zfp9, Ankrd26, Cacna1c
Downstream geneWnt5b, Fbxl14, Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212H20.bB6Ng01-212H20.g
ACCGA030270GA030271
length915774
definitionB6Ng01-212H20.b B6Ng01-212H20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,156,471 - 119,157,146)(119,342,706 - 119,343,476)
sequence
gaattcttccattccagtgtaagacctgttccgagccaaaacagatgacc
aattcctctgccatctgtgacaaccctaaacttatcaaacctgtccccgt
gagacccagcagcagccagaggctgcaaggacctgcgcccagcaaggtag
gaatccactgattctggtttgttatcttttcttttttttccttttttttt
ttttcacatgattggtttttttttcttttttttttttcttttttatcatt
ttttattaggtatttccctcatttacatttccaatgctatcccaaaagtc
ccccataccctccccctcctcccctacccacccactcccactttttggca
ctggcgttcccctgtactggggcatataaagtttacatgatcaatgggcc
tctttccagtgatggccgactaggccatcttttgatacatatgcagctag
agacaagagctccgggttactggttagttcatattgttcctcctataggg
ttgcagttccctttagctccttgggtactttctctagctcctccattggg
ggccctgtgatccatccaatagctgactgtgagcatccacttctgtgttt
gctaggccctggcatagtctcacaagagacagctatatctgggtcctttc
agcaaaatcttgctagtgtatgcaatggtgtcatcgtttggaggctgatt
atgggatggatccctggatatggcagtctctagatggtccatcctttttg
tctcagctccaaactttgtctctgtaactccttccatgggtgtttggttc
ccagttctaagaaggggcaaagtgtccacactttgggtcttccttcttct
tgagtttcatgtgttcgcaaattgtatcctaatatcttgggtattctaag
tttctgggctaatat
gaattccaggacagccagggaaagacccttgtctcaaaacaaaaagttga
ttttataaactgcaaagggttaatggagtttctagtacatacccatgtat
atatagatcatcaagtgttactaaatgacattcatttggactctttcata
gggaaaacctggaaactatagatacatgtttccttcccattccttttcac
acccgttttccaccccttcccactggcaagttgtcctcataacgttgatt
tggtccttttttgtctaatacgtgtatctgggcacggagctcagtggtag
aataccactgagggggccctagggttgcctaagaacaacaataaaagctg
cgtgcactcatagacatgcttgcggtatgaggaggttgcacaggccacgt
ttgagcgatgagtcagtcagcggcattgccagcaataatattctggctta
cgagccttccccagggctacactaactacctgtgtttgaggagctgctaa
tgctatttatataattatgagtgtgtttatactgatcttaattctcagtt
ttcaacattggggcaacttggcacaaatgggaatttagtgtgttatgaca
tttctacaagtgtttaaagatgcattgcttataaactttcaaatccaaag
ccaacgtgctttcaagcagtgtagatatttgactgatagcagtgtgattt
gcaagcatcatggaatatacttttttatgagtgtgtctggacttgtgtgt
atgagtgtatatataagggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_119156471_119157146
seq2: B6Ng01-212H20.b_43_718

seq1  GAATTCTTCCATTCCAGTGTAAGACCTGTTCCGAGCCAAAACAGATGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCATTCCAGTGTAAGACCTGTTCCGAGCCAAAACAGATGACC  50

seq1  AATTCCTCTGCCATCTGTGACAACCCTAAACTTATCAAACCTGTCCCCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTCTGCCATCTGTGACAACCCTAAACTTATCAAACCTGTCCCCGT  100

seq1  GAGACCCAGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGCAAGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCAGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGCAAGGTAG  150

seq1  GAATCCACTGATTCTGGTTTGTTATCTTTTCTTTTTTTTCCTTTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACTGATTCTGGTTTGTTATCTTTTCTTTTTTTTCCTTTTTTTTT  200

seq1  TTTTCACATGATTGGTTTTTTTTTCTTTTTTTTTTTTCTTTTTTATCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACATGATTGGTTTTTTTTTCTTTTTTTTTTTTCTTTTTTATCATT  250

seq1  TTTTATTAGGTATTTCCCTCATTTACATTTCCAATGCTATCCCAAAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAGGTATTTCCCTCATTTACATTTCCAATGCTATCCCAAAAGTC  300

seq1  CCCCATACCCTCCCCCTCCTCCCCTACCCACCCACTCCCACTTTTTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATACCCTCCCCCTCCTCCCCTACCCACCCACTCCCACTTTTTGGCA  350

seq1  CTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTACATGATCAATGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTACATGATCAATGGGCC  400

seq1  TCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAG  450

seq1  AGACAAGAGCTCCGGGTTACTGGTTAGTTCATATTGTTCCTCCTATAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGAGCTCCGGGTTACTGGTTAGTTCATATTGTTCCTCCTATAGGG  500

seq1  TTGCAGTTCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGG  550

seq1  GGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTT  600

seq1  GCTAGGCCCTGGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCCCTGGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTC  650

seq1  AGCAAAATCTTGCTAGTGTATGCAAT  676
      ||||||||||||||||||||||||||
seq2  AGCAAAATCTTGCTAGTGTATGCAAT  676

seq1: chr6_119342706_119343476
seq2: B6Ng01-212H20.g_66_839 (reverse)

seq1  CCCCACCC-TATATATACACTCATACACACAAGTCCAGACACACTCAT-A  48
      |||||||| ||||||||||||||||||||||||||||||||||||||| |
seq2  CCCCACCCTTATATATACACTCATACACACAAGTCCAGACACACTCATAA  50

seq1  AAAAGTATATTCCATGATGCTTGC-AATCACACTGCTATCAGTCAAATAT  97
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAAAGTATATTCCATGATGCTTGCAAATCACACTGCTATCAGTCAAATAT  100

seq1  CTACACTGCTTGAAAGCACGTTGGCTTTGGATTTGAAAGTTTATAAGCAA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTGCTTGAAAGCACGTTGGCTTTGGATTTGAAAGTTTATAAGCAA  150

seq1  TGCATCTTTAAACACTTGTAGAAATGTCATAACACACTAAATTCCCATTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTTTAAACACTTGTAGAAATGTCATAACACACTAAATTCCCATTT  200

seq1  GTGCCAAGTTGCCCCAATGTTGAAAACTGAGAATTAAGATCAGTATAAAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAGTTGCCCCAATGTTGAAAACTGAGAATTAAGATCAGTATAAAC  250

seq1  ACACTCATAATTATATAAATAGCATTAGCAGCTCCTCAAACACAGGTAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCATAATTATATAAATAGCATTAGCAGCTCCTCAAACACAGGTAGT  300

seq1  TAGTGTAGCCCTGGGGAAGGCTCGTAAGCCAGAATATTATTGCTGGCAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAGCCCTGGGGAAGGCTCGTAAGCCAGAATATTATTGCTGGCAAT  350

seq1  GCCGCTGACTGACTCATCGCTCAAACGTGGCCTGTGCAACCTCCTCATAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTGACTGACTCATCGCTCAAACGTGGCCTGTGCAACCTCCTCATAC  400

seq1  CGCAAGCATGTCTATGAGTGCACGCAGCTTTTATTGTTGTTCTTAGGCAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAGCATGTCTATGAGTGCACGCAGCTTTTATTGTTGTTCTTAGGCAA  450

seq1  CCCTAGGGCCCCCTCAGTGGTATTCTACCACTGAGCTCCGTGCCCAGATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGGCCCCCTCAGTGGTATTCTACCACTGAGCTCCGTGCCCAGATA  500

seq1  CACGTATTAGACAAAAAAGGACCAAATCAACGTTATGAGGACAACTTGCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTATTAGACAAAAAAGGACCAAATCAACGTTATGAGGACAACTTGCC  550

seq1  AGTGGGAAGGGGTGGAAAACGGGTGTGAAAAGGAATGGGAAGGAAACATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAGGGGTGGAAAACGGGTGTGAAAAGGAATGGGAAGGAAACATG  600

seq1  TATCTATAGTTTCCAGGTTTTCCCTATGAAAGAGTCCAAATGAATGTCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATAGTTTCCAGGTTTTCCCTATGAAAGAGTCCAAATGAATGTCAT  650

seq1  TTAGTAACACTTGATGATCTATATATACATGGGTATGTACTAGAAACTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAACACTTGATGATCTATATATACATGGGTATGTACTAGAAACTCC  700

seq1  ATTAACCCTTTGCAGTTTATAAAATCAACTTTTTGTTTTGAGACAAGGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCCTTTGCAGTTTATAAAATCAACTTTTTGTTTTGAGACAAGGGT  750

seq1  CTTTCCCTGGCTGTCCTGGAATTC  771
      ||||||||||||||||||||||||
seq2  CTTTCCCTGGCTGTCCTGGAATTC  774